RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 KHSRPQ92945 711 aaKnown RBP eCLIP3.47□□□□□ -1.857e-7■■□□□ 14
TOP2A-201ENST00000423485 HMCESQ96FZ2 354 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 RBBP8Q99708 897 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 SUCNR1Q9BXA5 334 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 DUSP15Q9H1R2 295 aaPredicted RBP3.47□□□□□ -1.85
TOP2A-201ENST00000423485 EPN3Q9H201 632 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 SLC6A20Q9NP91 592 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 IARS2Q9NSE4 1012 aaKnown RBP3.47□□□□□ -1.85
TOP2A-201ENST00000423485 SACM1LQ9NTJ5 587 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 DNMT3BQ9UBC3 853 aaKnown RBP3.47□□□□□ -1.85
TOP2A-201ENST00000423485 RNF14Q9UBS8 474 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 AGO1Q9UL18 857 aaKnown RBP3.47□□□□□ -1.85
TOP2A-201ENST00000423485 ZNF346Q9UL40 294 aaKnown RBP3.47□□□□□ -1.85
TOP2A-201ENST00000423485 RRP15Q9Y3B9 282 aaKnown RBP3.47□□□□□ -1.85
TOP2A-201ENST00000423485 SCN4AP35499 1836 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 C1orf232A0A0U1RR37 186 aa3.46□□□□□ -1.85
TOP2A-201ENST00000423485 FAM237BA0A1B0GVD1 139 aa3.46□□□□□ -1.85
TOP2A-201ENST00000423485 ATP6AP2A0A1C7CYW4 349 aa3.46□□□□□ -1.85
TOP2A-201ENST00000423485 LRIT2A6NDA9 550 aa3.46□□□□□ -1.85
TOP2A-201ENST00000423485 C21orf140B9A014 251 aa3.46□□□□□ -1.85
TOP2A-201ENST00000423485 GOLGA8KD6RF30 607 aa3.46□□□□□ -1.85
TOP2A-201ENST00000423485 ATP6AP2O75787 350 aa3.46□□□□□ -1.85
TOP2A-201ENST00000423485 ALX3O95076 343 aa3.46□□□□□ -1.85
TOP2A-201ENST00000423485 TGM6O95932 706 aa3.46□□□□□ -1.85
TOP2A-201ENST00000423485 ITIH2P19823 946 aa3.46□□□□□ -1.85
TOP2A-201ENST00000423485 GPD1P21695 349 aa3.46□□□□□ -1.85
TOP2A-201ENST00000423485 CTNNA1P35221 906 aaKnown RBP3.46□□□□□ -1.85
TOP2A-201ENST00000423485 MAGEA6P43360 314 aa3.46□□□□□ -1.85
TOP2A-201ENST00000423485 CYB561P49447 251 aa3.46□□□□□ -1.85
TOP2A-201ENST00000423485 VASPP50552 380 aaPredicted RBP3.46□□□□□ -1.85
TOP2A-201ENST00000423485 MXRA7P84157 204 aa3.46□□□□□ -1.85
TOP2A-201ENST00000423485 HOXA4Q00056 320 aaPredicted RBP3.46□□□□□ -1.85
TOP2A-201ENST00000423485 ADIGQ0VDE8 80 aa3.46□□□□□ -1.85
TOP2A-201ENST00000423485 VPS26BQ4G0F5 336 aa3.46□□□□□ -1.85
TOP2A-201ENST00000423485 HSP90AA5PQ58FG0 334 aa3.46□□□□□ -1.85
TOP2A-201ENST00000423485 RAET1LQ5VY80 246 aa3.46□□□□□ -1.85
TOP2A-201ENST00000423485 GALNT18Q6P9A2 607 aa3.46□□□□□ -1.85
TOP2A-201ENST00000423485 FAM92BQ6ZTR7 304 aa3.46□□□□□ -1.85
TOP2A-201ENST00000423485 UNC13DQ70J99 1090 aa3.46□□□□□ -1.85
TOP2A-201ENST00000423485 GLCCI1Q86VQ1 547 aa3.46□□□□□ -1.85
TOP2A-201ENST00000423485 SPNS2Q8IVW8 549 aa3.46□□□□□ -1.85
TOP2A-201ENST00000423485 UBASH3BQ8TF42 649 aa3.46□□□□□ -1.85
TOP2A-201ENST00000423485 TSACCQ96A04 125 aaPredicted RBP3.46□□□□□ -1.85
TOP2A-201ENST00000423485 TWNKQ96RR1 684 aa3.46□□□□□ -1.85
TOP2A-201ENST00000423485 CD180Q99467 661 aa3.46□□□□□ -1.85
TOP2A-201ENST00000423485 C7orf25Q9BPX7 421 aa3.46□□□□□ -1.85
TOP2A-201ENST00000423485 APOL2Q9BQE5 337 aa3.46□□□□□ -1.85
TOP2A-201ENST00000423485 MENTQ9BUN1 341 aa3.46□□□□□ -1.85
TOP2A-201ENST00000423485 SOX17Q9H6I2 414 aaPredicted RBP3.46□□□□□ -1.85
TOP2A-201ENST00000423485 ZDHHC3Q9NYG2 299 aa3.46□□□□□ -1.85
TOP2A-201ENST00000423485 TFR2Q9UP52 801 aa3.46□□□□□ -1.85
TOP2A-201ENST00000423485 AP4E1Q9UPM8 1137 aa3.46□□□□□ -1.85
TOP2A-201ENST00000423485 CTNND2Q9UQB3 1225 aa3.46□□□□□ -1.85
TOP2A-201ENST00000423485 POFUT2Q9Y2G5 429 aa3.46□□□□□ -1.85
TOP2A-201ENST00000423485 V9GYQ6 96 aa3.46□□□□□ -1.85
TOP2A-201ENST00000423485 GOLGA4Q13439 2230 aaKnown RBP3.46□□□□□ -1.85
TOP2A-201ENST00000423485 HELZP42694 1942 aaKnown RBP3.46□□□□□ -1.86
TOP2A-201ENST00000423485 PCNX3Q9H6A9 2034 aa3.46□□□□□ -1.86
TOP2A-201ENST00000423485 USP24Q9UPU5 2620 aa3.46□□□□□ -1.86
TOP2A-201ENST00000423485 TENM2Q9NT68 2774 aa3.46□□□□□ -1.86
TOP2A-201ENST00000423485 A8MUA0 341 aa3.46□□□□□ -1.86
TOP2A-201ENST00000423485 POTECB2RU33 542 aa3.46□□□□□ -1.86
TOP2A-201ENST00000423485 AREL1O15033 823 aa3.46□□□□□ -1.86
TOP2A-201ENST00000423485 LRRTM2O43300 516 aa3.46□□□□□ -1.86
TOP2A-201ENST00000423485 ZNF883P0CG24 379 aa3.46□□□□□ -1.86
TOP2A-201ENST00000423485 PRSS56P0CW18 603 aa3.46□□□□□ -1.86
TOP2A-201ENST00000423485 UMPSP11172 480 aa3.46□□□□□ -1.86
TOP2A-201ENST00000423485 ZNF8P17098 575 aaPredicted RBP3.46□□□□□ -1.86
TOP2A-201ENST00000423485 POU3F2P20265 443 aaPredicted RBP3.46□□□□□ -1.86
TOP2A-201ENST00000423485 TCEA1P23193 301 aaKnown RBP3.46□□□□□ -1.86
TOP2A-201ENST00000423485 PTX3P26022 381 aaPredicted RBP3.46□□□□□ -1.86
TOP2A-201ENST00000423485 CSKP41240 450 aa3.46□□□□□ -1.86
TOP2A-201ENST00000423485 MAGEA11P43364 429 aa3.46□□□□□ -1.86
TOP2A-201ENST00000423485 MMP13P45452 471 aa3.46□□□□□ -1.86
TOP2A-201ENST00000423485 PHC1P78364 1004 aa3.46□□□□□ -1.86
TOP2A-201ENST00000423485 SRSF5Q13243 272 aaKnown RBP3.46□□□□□ -1.86
TOP2A-201ENST00000423485 MTM1Q13496 603 aa3.46□□□□□ -1.86
TOP2A-201ENST00000423485 KCNAB1Q14722 419 aa3.46□□□□□ -1.86
TOP2A-201ENST00000423485 NR6A1Q15406 480 aa3.46□□□□□ -1.86
TOP2A-201ENST00000423485 WHAMMP3Q1A5X7 153 aa3.46□□□□□ -1.86
TOP2A-201ENST00000423485 AGAP6Q5VW22 663 aa3.46□□□□□ -1.86
TOP2A-201ENST00000423485 SLC22A25Q6T423 547 aa3.46□□□□□ -1.86
TOP2A-201ENST00000423485 RGS9BPQ6ZS82 235 aa3.46□□□□□ -1.86
TOP2A-201ENST00000423485 CHSY3Q70JA7 882 aa3.46□□□□□ -1.86
TOP2A-201ENST00000423485 IPMKQ8NFU5 416 aa3.46□□□□□ -1.86
TOP2A-201ENST00000423485 ZNF483Q8TF39 744 aaPredicted RBP3.46□□□□□ -1.86
TOP2A-201ENST00000423485 NELL1Q92832 810 aa3.46□□□□□ -1.86
TOP2A-201ENST00000423485 NRBF2Q96F24 287 aa3.46□□□□□ -1.86
TOP2A-201ENST00000423485 THUMPD3Q9BV44 507 aaKnown RBP3.46□□□□□ -1.86
TOP2A-201ENST00000423485 WWP1Q9H0M0 922 aa3.46□□□□□ -1.86
TOP2A-201ENST00000423485 ACTR8Q9H981 624 aa3.46□□□□□ -1.86
TOP2A-201ENST00000423485 GNPTGQ9UJJ9 305 aa3.46□□□□□ -1.86
TOP2A-201ENST00000423485 PNMA8BQ9ULN7 279 aaPredicted RBP3.46□□□□□ -1.86
TOP2A-201ENST00000423485 ZFR2Q9UPR6 939 aaKnown RBP3.46□□□□□ -1.86
TOP2A-201ENST00000423485 IFT52Q9Y366 437 aa3.46□□□□□ -1.86
TOP2A-201ENST00000423485 HEY1Q9Y5J3 304 aa3.46□□□□□ -1.86
TOP2A-201ENST00000423485 PRR14LQ5THK1 2151 aa3.46□□□□□ -1.86
TOP2A-201ENST00000423485 DOCK4Q8N1I0 1966 aa3.46□□□□□ -1.86
TOP2A-201ENST00000423485 NLRC5Q86WI3 1866 aa3.46□□□□□ -1.86
TOP2A-201ENST00000423485 PLXNB2O15031 1838 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms