RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 ACADMP11310 421 aa7.84□□□□□ -1.15
HMGXB4-202ENST00000418170 G6PDP11413 515 aa7.84□□□□□ -1.15
HMGXB4-202ENST00000418170 GNPDA1P46926 289 aa7.84□□□□□ -1.15
HMGXB4-202ENST00000418170 SUOXP51687 545 aa7.84□□□□□ -1.15
HMGXB4-202ENST00000418170 OAZ1P54368 228 aa7.84□□□□□ -1.15
HMGXB4-202ENST00000418170 ASAH1Q13510 395 aa7.84□□□□□ -1.15
HMGXB4-202ENST00000418170 ZNF79Q15937 498 aa7.84□□□□□ -1.15
HMGXB4-202ENST00000418170 LETMD1Q6P1Q0 360 aa7.84□□□□□ -1.15
HMGXB4-202ENST00000418170 FAM122CQ6P4D5 195 aa7.84□□□□□ -1.15
HMGXB4-202ENST00000418170 Q6ZSR9 355 aa7.84□□□□□ -1.15
HMGXB4-202ENST00000418170 HFE2Q6ZVN8 426 aa7.84□□□□□ -1.15
HMGXB4-202ENST00000418170 KDELC2Q7Z4H8 507 aa7.84□□□□□ -1.15
HMGXB4-202ENST00000418170 ZDHHC21Q8IVQ6 265 aa7.84□□□□□ -1.15
HMGXB4-202ENST00000418170 VWA5B2Q8N398 1253 aa7.84□□□□□ -1.15
HMGXB4-202ENST00000418170 YIPF7Q8N8F6 280 aa7.84□□□□□ -1.15
HMGXB4-202ENST00000418170 NUDT8Q8WV74 236 aa7.84□□□□□ -1.15
HMGXB4-202ENST00000418170 MYDGFQ969H8 173 aa7.84□□□□□ -1.15
HMGXB4-202ENST00000418170 RAD9AQ99638 391 aa7.84□□□□□ -1.15
HMGXB4-202ENST00000418170 SMURF1Q9HCE7 757 aa7.84□□□□□ -1.15
HMGXB4-202ENST00000418170 TIGARQ9NQ88 270 aa7.84□□□□□ -1.15
HMGXB4-202ENST00000418170 PLCXD1Q9NUJ7 323 aa7.84□□□□□ -1.15
HMGXB4-202ENST00000418170 VPS4AQ9UN37 437 aa7.84□□□□□ -1.15
HMGXB4-202ENST00000418170 SNX7Q9UNH6 387 aa7.84□□□□□ -1.15
HMGXB4-202ENST00000418170 CRYL1Q9Y2S2 319 aa7.84□□□□□ -1.15
HMGXB4-202ENST00000418170 ZSWIM8A7E2V4 1837 aa7.84□□□□□ -1.15
HMGXB4-202ENST00000418170 A0A1W2PQ09 198 aa7.84□□□□□ -1.15
HMGXB4-202ENST00000418170 B4DXG7 233 aa7.84□□□□□ -1.15
HMGXB4-202ENST00000418170 SUPT3HB4E1H0 165 aa7.84□□□□□ -1.15
HMGXB4-202ENST00000418170 E9PQ18 207 aa7.84□□□□□ -1.15
HMGXB4-202ENST00000418170 NFKBIEO00221 500 aa7.84□□□□□ -1.15
HMGXB4-202ENST00000418170 CYP7B1O75881 506 aa7.84□□□□□ -1.15
HMGXB4-202ENST00000418170 OR7A10O76100 309 aa7.84□□□□□ -1.15
HMGXB4-202ENST00000418170 CD72P21854 359 aa7.84□□□□□ -1.15
HMGXB4-202ENST00000418170 HLA-DMAP28067 261 aa7.84□□□□□ -1.15
HMGXB4-202ENST00000418170 GMPSP49915 693 aaPredicted RBP7.84□□□□□ -1.15
HMGXB4-202ENST00000418170 KIAA0040Q15053 153 aa7.84□□□□□ -1.15
HMGXB4-202ENST00000418170 NOMO2Q5JPE7 1267 aa7.84□□□□□ -1.15
HMGXB4-202ENST00000418170 TOR1AIP1Q5JTV8 583 aa7.84□□□□□ -1.15
HMGXB4-202ENST00000418170 FKBP1CQ5VVH2 108 aa7.84□□□□□ -1.15
HMGXB4-202ENST00000418170 ZNF549Q6P9A3 640 aa7.84□□□□□ -1.15
HMGXB4-202ENST00000418170 CCDC120Q96HB5 630 aa7.84□□□□□ -1.15
HMGXB4-202ENST00000418170 TMEM80Q96HE8 168 aa7.84□□□□□ -1.15
HMGXB4-202ENST00000418170 C1orf74Q96LT6 269 aa7.84□□□□□ -1.15
HMGXB4-202ENST00000418170 TTLL2Q9BWV7 592 aa7.84□□□□□ -1.15
HMGXB4-202ENST00000418170 PRRG3Q9BZD7 231 aa7.84□□□□□ -1.15
HMGXB4-202ENST00000418170 TNKS2Q9H2K2 1166 aa7.84□□□□□ -1.15
HMGXB4-202ENST00000418170 GLTPQ9NZD2 209 aa7.84□□□□□ -1.15
HMGXB4-202ENST00000418170 MARCH4Q9P2E8 410 aaPredicted RBP7.84□□□□□ -1.15
HMGXB4-202ENST00000418170 SNX8Q9Y5X2 465 aa7.84□□□□□ -1.15
HMGXB4-202ENST00000418170 ANKRD36A6QL64 1941 aa7.84□□□□□ -1.15
HMGXB4-202ENST00000418170 ASB14A6NK59 587 aa7.84□□□□□ -1.15
HMGXB4-202ENST00000418170 BET1O15155 118 aa7.84□□□□□ -1.15
HMGXB4-202ENST00000418170 AKR7A2O43488 359 aa7.84□□□□□ -1.15
HMGXB4-202ENST00000418170 CA12O43570 354 aa7.84□□□□□ -1.15
HMGXB4-202ENST00000418170 OR2B3O76000 313 aa7.84□□□□□ -1.15
HMGXB4-202ENST00000418170 PDGFAP04085 211 aa7.84□□□□□ -1.15
HMGXB4-202ENST00000418170 ADORA3P0DMS8 318 aa7.84□□□□□ -1.15
HMGXB4-202ENST00000418170 LMO2P25791 158 aa7.84□□□□□ -1.15
HMGXB4-202ENST00000418170 CSTF2P33240 577 aaKnown RBP eCLIP7.84□□□□□ -1.15
HMGXB4-202ENST00000418170 SLC19A1P41440 591 aa7.84□□□□□ -1.15
HMGXB4-202ENST00000418170 NDUFV1P49821 464 aa7.84□□□□□ -1.15
HMGXB4-202ENST00000418170 CLCN3P51790 818 aa7.84□□□□□ -1.15
HMGXB4-202ENST00000418170 RPP38P78345 283 aaKnown RBP7.84□□□□□ -1.15
HMGXB4-202ENST00000418170 OLR1P78380 273 aa7.84□□□□□ -1.15
HMGXB4-202ENST00000418170 SCN1BQ07699 218 aa7.84□□□□□ -1.15
HMGXB4-202ENST00000418170 FBXO48Q5FWF7 155 aa7.84□□□□□ -1.15
HMGXB4-202ENST00000418170 ZMAT1Q5H9K5 638 aa7.84□□□□□ -1.15
HMGXB4-202ENST00000418170 MLIPQ5VWP3 458 aa7.84□□□□□ -1.15
HMGXB4-202ENST00000418170 OR2T5Q6IEZ7 315 aa7.84□□□□□ -1.15
HMGXB4-202ENST00000418170 P3H2Q8IVL5 708 aa7.84□□□□□ -1.15
HMGXB4-202ENST00000418170 MSRB3Q8IXL7 192 aa7.84□□□□□ -1.15
HMGXB4-202ENST00000418170 OR2T29Q8NH02 315 aa7.84□□□□□ -1.15
HMGXB4-202ENST00000418170 NETO1Q8TDF5 533 aa7.84□□□□□ -1.15
HMGXB4-202ENST00000418170 TRAPPC12Q8WVT3 735 aa7.84□□□□□ -1.15
HMGXB4-202ENST00000418170 SLC13A3Q8WWT9 602 aa7.84□□□□□ -1.15
HMGXB4-202ENST00000418170 ASB15Q8WXK1 588 aa7.84□□□□□ -1.15
HMGXB4-202ENST00000418170 FRMD6Q96NE9 622 aa7.84□□□□□ -1.15
HMGXB4-202ENST00000418170 C1QTNF3Q9BXJ4 246 aa7.84□□□□□ -1.15
HMGXB4-202ENST00000418170 SRRQ9GZT4 340 aa7.84□□□□□ -1.15
HMGXB4-202ENST00000418170 MFSD1Q9H3U5 465 aa7.84□□□□□ -1.15
HMGXB4-202ENST00000418170 POPDC3Q9HBV1 291 aa7.84□□□□□ -1.15
HMGXB4-202ENST00000418170 AASDHPPTQ9NRN7 309 aa7.84□□□□□ -1.15
HMGXB4-202ENST00000418170 KRT84Q9NSB2 600 aa7.84□□□□□ -1.15
HMGXB4-202ENST00000418170 SLC25A37Q9NYZ2 338 aa7.84□□□□□ -1.15
HMGXB4-202ENST00000418170 OR12D3Q9UGF7 316 aa7.84□□□□□ -1.15
HMGXB4-202ENST00000418170 TRMT6Q9UJA5 497 aaKnown RBP7.84□□□□□ -1.15
HMGXB4-202ENST00000418170 SNX10Q9Y5X0 201 aa7.84□□□□□ -1.15
HMGXB4-202ENST00000418170 MLYCDO95822 493 aa7.83□□□□□ -1.16
HMGXB4-202ENST00000418170 DPEP1P16444 411 aa7.83□□□□□ -1.16
HMGXB4-202ENST00000418170 ATN1P54259 1190 aaPredicted RBP7.83□□□□□ -1.16
HMGXB4-202ENST00000418170 BTBD16Q32M84 506 aa7.83□□□□□ -1.16
HMGXB4-202ENST00000418170 FAM83AQ86UY5 434 aa7.83□□□□□ -1.16
HMGXB4-202ENST00000418170 PGBD5Q8N414 524 aa7.83□□□□□ -1.16
HMGXB4-202ENST00000418170 DNAJC22Q8N4W6 341 aa7.83□□□□□ -1.16
HMGXB4-202ENST00000418170 OR4M2Q8NGB6 313 aa7.83□□□□□ -1.16
HMGXB4-202ENST00000418170 OR6P1Q8NGX9 317 aa7.83□□□□□ -1.16
HMGXB4-202ENST00000418170 STAG3L4Q8TBR4 150 aa7.83□□□□□ -1.16
HMGXB4-202ENST00000418170 KIAA1191Q96A73 305 aa7.83□□□□□ -1.16
HMGXB4-202ENST00000418170 SH3KBP1Q96B97 665 aa7.83□□□□□ -1.16
HMGXB4-202ENST00000418170 RNF121Q9H920 327 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms