RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 NEUROG2Q9H2A3 272 aa3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 CENPHQ9H3R5 247 aa3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 AAMDCQ9H7C9 122 aa3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 CATSPERBQ9H7T0 1116 aa3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 MOV10Q9HCE1 1003 aaKnown RBP3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 MED4Q9NPJ6 270 aa3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 SEMA4BQ9NPR2 832 aaPredicted RBP3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 ENTPD7Q9NQZ7 604 aa3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 DECR2Q9NUI1 292 aa3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 OGFRQ9NZT2 677 aa3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 SEPT10Q9P0V9 454 aa3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 PAK5Q9P286 719 aa3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 UXTQ9UBK9 157 aaPredicted RBP3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 SLC12A6Q9UHW9 1150 aa3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 ANAPC5Q9UJX4 755 aa3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 SCML2Q9UQR0 700 aa3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 YIPF1Q9Y548 306 aa3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 ATG2AQ2TAZ0 1938 aa3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 MTCL1Q9Y4B5 1905 aaKnown RBP3.82□□□□□ -1.8
HMGB3P20-201ENST00000417997 NUP210Q8TEM1 1887 aaPredicted RBP3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 A0A1W2PPC1 479 aa3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 GOLGA8KD6RF30 607 aa3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 MAP2K7O14733 419 aa3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 CBFA2T3O75081 653 aa3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 FGF18O76093 207 aa3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 NDUFB8O95169 186 aa3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 GJB5O95377 273 aa3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 NDST3O95803 873 aa3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 VIPP01282 170 aa3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 IGLV3-25P01717 112 aa3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 FYNP06241 537 aa3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 IVLP07476 585 aa3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 HMBSP08397 361 aa3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 MYZAPP0CAP1 466 aa3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 ZSCAN5DPP0CG00 497 aa3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 RARGP13631 454 aa3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 ETS1P14921 441 aa3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 TSHRP16473 764 aa3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 ERCC2P18074 760 aa3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 ATF6P18850 670 aa3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 KLRC2P26717 231 aa3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 STIP1P31948 543 aaKnown RBP3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 HOXD12P35452 270 aa3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 HSD17B3P37058 310 aa3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 CDKN2AP42771 156 aaKnown RBP3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 NR2C2P49116 596 aa3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 CXCR3P49682 368 aa3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 AGTR2P50052 363 aa3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 ARL4CP56559 192 aa3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 SARNPP82979 210 aaKnown RBP3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 GBE1Q04446 702 aa3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 AP1B1Q10567 949 aa3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 TWF1Q12792 350 aa3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 SEMA3AQ14563 771 aa3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 MORF4L2Q15014 288 aa3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 PAFAH1B3Q15102 231 aaKnown RBP3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 PDK1Q15118 436 aa3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 TRADDQ15628 312 aa3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 KCTD19Q17RG1 926 aaPredicted RBP3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 KLHL22Q53GT1 634 aa3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 SLC45A4Q5BKX6 768 aa3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 SPDYCQ5MJ68 293 aa3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 CEP85LQ5SZL2 805 aa3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 PLPP4Q5VZY2 271 aa3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 FAM90A2PQ658T7 463 aa3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 RAP1GAP2Q684P5 730 aa3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 NUGGCQ68CJ6 796 aa3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 CCDC144NLQ6NUI1 221 aa3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 LRRC31Q6UY01 552 aa3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 C4orf22Q6V702 233 aa3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 C9orf47Q6ZRZ4 202 aa3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 RFX8Q6ZV50 586 aa3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 CENPUQ71F23 418 aa3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 BNIPLQ7Z465 357 aa3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 SCD5Q86SK9 330 aa3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 CROCCP2Q86T23 111 aa3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 PRUNE1Q86TP1 453 aa3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 ITIH5Q86UX2 942 aa3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 ZNF354CQ86Y25 554 aa3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 HERC6Q8IVU3 1022 aa3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 RNF168Q8IYW5 571 aaPredicted RBP3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 PYROXD2Q8N2H3 581 aa3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 ATPAF2Q8N5M1 289 aa3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 PQLC3Q8N755 202 aa3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 PLD5Q8N7P1 536 aa3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 CCNYQ8ND76 341 aa3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 BCAS4Q8TDM0 211 aa3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 WIPF2Q8TF74 440 aaPredicted RBP3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 OVCA2Q8WZ82 227 aa3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 CASP10Q92851 521 aa3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 PMM1Q92871 262 aa3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 ART4Q93070 314 aa3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 NT5C3BQ969T7 300 aa3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 CEP295NLQ96MC4 621 aa3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 TTC25Q96NG3 672 aa3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 STMN4Q9H169 189 aaPredicted RBP3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 ZBP1Q9H171 429 aa3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 CDC42EP4Q9H3Q1 356 aaKnown RBP3.81□□□□□ -1.8
HMGB3P20-201ENST00000417997 C10orf88Q9H8K7 445 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms