RNA–Protein interactions for RNA: ENST00000417814.3

TNFRSF8-203, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 3,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-203ENST00000417814 IRF8Q02556 426 aa12.9□□□□□ -0.34
TNFRSF8-203ENST00000417814 HECTD3Q5T447 861 aa12.9□□□□□ -0.34
TNFRSF8-203ENST00000417814 CD300LGQ6UXG3 332 aa12.9□□□□□ -0.34
TNFRSF8-203ENST00000417814 DCDC5Q6ZRR9 648 aa12.9□□□□□ -0.34
TNFRSF8-203ENST00000417814 UBE2R2Q712K3 238 aaPredicted RBP12.9□□□□□ -0.34
TNFRSF8-203ENST00000417814 CYP4Z1Q86W10 505 aa12.9□□□□□ -0.34
TNFRSF8-203ENST00000417814 ZHX1-C8orf76Q96EF9 292 aa12.9□□□□□ -0.34
TNFRSF8-203ENST00000417814 MCMBPQ9BTE3 642 aa12.9□□□□□ -0.34
TNFRSF8-203ENST00000417814 NTN4Q9HB63 628 aa12.9□□□□□ -0.34
TNFRSF8-203ENST00000417814 INTS10Q9NVR2 710 aaKnown RBP12.9□□□□□ -0.34
TNFRSF8-203ENST00000417814 TBCCD1Q9NVR7 557 aa12.9□□□□□ -0.34
TNFRSF8-203ENST00000417814 ELOVL2Q9NXB9 296 aa12.9□□□□□ -0.34
TNFRSF8-203ENST00000417814 SCN3BQ9NY72 215 aa12.9□□□□□ -0.34
TNFRSF8-203ENST00000417814 PRUNE2Q8WUY3 3088 aa12.9□□□□□ -0.34
TNFRSF8-203ENST00000417814 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.9□□□□□ -0.34
TNFRSF8-203ENST00000417814 BMP10O95393 424 aa12.9□□□□□ -0.34
TNFRSF8-203ENST00000417814 XPAP23025 273 aaPredicted RBP12.9□□□□□ -0.34
TNFRSF8-203ENST00000417814 POLD2P49005 469 aa12.9□□□□□ -0.34
TNFRSF8-203ENST00000417814 SLC11A1P49279 550 aa12.9□□□□□ -0.34
TNFRSF8-203ENST00000417814 ADAM17P78536 824 aa12.9□□□□□ -0.34
TNFRSF8-203ENST00000417814 PARP15Q460N3 678 aa12.9□□□□□ -0.34
TNFRSF8-203ENST00000417814 SETMARQ53H47 684 aaPredicted RBP12.9□□□□□ -0.34
TNFRSF8-203ENST00000417814 TTC23Q5W5X9 447 aa12.9□□□□□ -0.34
TNFRSF8-203ENST00000417814 THOC7Q6I9Y2 204 aaKnown RBP12.9□□□□□ -0.34
TNFRSF8-203ENST00000417814 HIPK1Q86Z02 1210 aa12.9□□□□□ -0.34
TNFRSF8-203ENST00000417814 DTX3Q8N9I9 347 aa12.9□□□□□ -0.34
TNFRSF8-203ENST00000417814 APIPQ96GX9 242 aa12.9□□□□□ -0.34
TNFRSF8-203ENST00000417814 IL4I1Q96RQ9 567 aa12.9□□□□□ -0.34
TNFRSF8-203ENST00000417814 HEPHQ9BQS7 1158 aa12.9□□□□□ -0.34
TNFRSF8-203ENST00000417814 TSEN34Q9BSV6 310 aaKnown RBP12.9□□□□□ -0.34
TNFRSF8-203ENST00000417814 ALOXE3Q9BYJ1 711 aa12.9□□□□□ -0.34
TNFRSF8-203ENST00000417814 DERL2Q9GZP9 239 aa12.9□□□□□ -0.34
TNFRSF8-203ENST00000417814 C14orf119Q9NWQ9 140 aa12.9□□□□□ -0.34
TNFRSF8-203ENST00000417814 PSME2Q9UL46 239 aa12.9□□□□□ -0.34
TNFRSF8-203ENST00000417814 CLEC4EQ9ULY5 219 aa12.9□□□□□ -0.34
TNFRSF8-203ENST00000417814 PAPPA2Q9BXP8 1791 aa12.89□□□□□ -0.35
TNFRSF8-203ENST00000417814 RLFQ13129 1914 aa12.89□□□□□ -0.35
TNFRSF8-203ENST00000417814 STK16O75716 305 aa12.89□□□□□ -0.35
TNFRSF8-203ENST00000417814 BCKDHAP12694 445 aa12.89□□□□□ -0.35
TNFRSF8-203ENST00000417814 TYMPP19971 482 aa12.89□□□□□ -0.35
TNFRSF8-203ENST00000417814 HOXD9P28356 352 aaPredicted RBP12.89□□□□□ -0.35
TNFRSF8-203ENST00000417814 CTGFP29279 349 aa12.89□□□□□ -0.35
TNFRSF8-203ENST00000417814 PREPP48147 710 aa12.89□□□□□ -0.35
TNFRSF8-203ENST00000417814 SLC14A1Q13336 389 aa12.89□□□□□ -0.35
TNFRSF8-203ENST00000417814 MED22Q15528 200 aa12.89□□□□□ -0.35
TNFRSF8-203ENST00000417814 XKR4Q5GH76 650 aa12.89□□□□□ -0.35
TNFRSF8-203ENST00000417814 FUT10Q6P4F1 479 aa12.89□□□□□ -0.35
TNFRSF8-203ENST00000417814 SPATC1Q76KD6 591 aa12.89□□□□□ -0.35
TNFRSF8-203ENST00000417814 LIMS2Q7Z4I7 341 aa12.89□□□□□ -0.35
TNFRSF8-203ENST00000417814 SPATA19Q7Z5L4 167 aa12.89□□□□□ -0.35
TNFRSF8-203ENST00000417814 PHYKPLQ8IUZ5 450 aa12.89□□□□□ -0.35
TNFRSF8-203ENST00000417814 LILRA3Q8N6C8 439 aaPredicted RBP12.89□□□□□ -0.35
TNFRSF8-203ENST00000417814 SH3KBP1Q96B97 665 aa12.89□□□□□ -0.35
TNFRSF8-203ENST00000417814 ASPSCR1Q9BZE9 553 aa12.89□□□□□ -0.35
TNFRSF8-203ENST00000417814 KRT84Q9NSB2 600 aa12.89□□□□□ -0.35
TNFRSF8-203ENST00000417814 MBD1Q9UIS9 605 aaPredicted RBP12.89□□□□□ -0.35
TNFRSF8-203ENST00000417814 MAGEL2Q9UJ55 1249 aa12.89□□□□□ -0.35
TNFRSF8-203ENST00000417814 SCML2Q9UQR0 700 aa12.89□□□□□ -0.35
TNFRSF8-203ENST00000417814 MAP4K5Q9Y4K4 846 aa12.89□□□□□ -0.35
TNFRSF8-203ENST00000417814 ZNF831Q5JPB2 1677 aa12.89□□□□□ -0.35
TNFRSF8-203ENST00000417814 IQCA1LA6NCM1 817 aa12.89□□□□□ -0.35
TNFRSF8-203ENST00000417814 SLC38A8A6NNN8 435 aa12.89□□□□□ -0.35
TNFRSF8-203ENST00000417814 SERPINB7O75635 380 aa12.89□□□□□ -0.35
TNFRSF8-203ENST00000417814 PDYNP01213 254 aa12.89□□□□□ -0.35
TNFRSF8-203ENST00000417814 PRLP01236 227 aa12.89□□□□□ -0.35
TNFRSF8-203ENST00000417814 CDH1P12830 882 aa12.89□□□□□ -0.35
TNFRSF8-203ENST00000417814 HSD17B1P14061 328 aa12.89□□□□□ -0.35
TNFRSF8-203ENST00000417814 HKDC1Q2TB90 917 aa12.89□□□□□ -0.35
TNFRSF8-203ENST00000417814 PTCHD3Q3KNS1 767 aa12.89□□□□□ -0.35
TNFRSF8-203ENST00000417814 ZNF697Q5TEC3 545 aa12.89□□□□□ -0.35
TNFRSF8-203ENST00000417814 ZUFSPQ96AP4 578 aa12.89□□□□□ -0.35
TNFRSF8-203ENST00000417814 BEX2Q9BXY8 128 aa12.89□□□□□ -0.35
TNFRSF8-203ENST00000417814 C3orf18Q9UK00 162 aa12.89□□□□□ -0.35
TNFRSF8-203ENST00000417814 CACNA1IQ9P0X4 2223 aa12.89□□□□□ -0.35
TNFRSF8-203ENST00000417814 LOC285095A0A1B0GVY8 99 aa12.89□□□□□ -0.35
TNFRSF8-203ENST00000417814 DUSP11O75319 330 aaKnown RBP12.89□□□□□ -0.35
TNFRSF8-203ENST00000417814 OXSR1O95747 527 aaPredicted RBP12.89□□□□□ -0.35
TNFRSF8-203ENST00000417814 GRK3P35626 688 aa12.89□□□□□ -0.35
TNFRSF8-203ENST00000417814 NKX3-2P78367 333 aa12.89□□□□□ -0.35
TNFRSF8-203ENST00000417814 PCBP2Q15366 365 aaKnown RBP eCLIP12.89□□□□□ -0.35
TNFRSF8-203ENST00000417814 ZNF829Q3KNS6 432 aaPredicted RBP12.89□□□□□ -0.35
TNFRSF8-203ENST00000417814 XKR6Q5GH73 641 aa12.89□□□□□ -0.35
TNFRSF8-203ENST00000417814 ZNF773Q6PK81 442 aa12.89□□□□□ -0.35
TNFRSF8-203ENST00000417814 ADHFE1Q8IWW8 467 aa12.89□□□□□ -0.35
TNFRSF8-203ENST00000417814 TTC29Q8NA56 475 aaPredicted RBP12.89□□□□□ -0.35
TNFRSF8-203ENST00000417814 TANKQ92844 425 aa12.89□□□□□ -0.35
TNFRSF8-203ENST00000417814 CEP19Q96LK0 163 aa12.89□□□□□ -0.35
TNFRSF8-203ENST00000417814 VNN3Q9NY84 501 aa12.89□□□□□ -0.35
TNFRSF8-203ENST00000417814 GLTPD2A6NH11 291 aa12.88□□□□□ -0.35
TNFRSF8-203ENST00000417814 OR7A17O14581 309 aa12.88□□□□□ -0.35
TNFRSF8-203ENST00000417814 CLPXO76031 633 aa12.88□□□□□ -0.35
TNFRSF8-203ENST00000417814 PRSS23O95084 383 aa12.88□□□□□ -0.35
TNFRSF8-203ENST00000417814 CD36P16671 472 aa12.88□□□□□ -0.35
TNFRSF8-203ENST00000417814 ENGP17813 658 aa12.88□□□□□ -0.35
TNFRSF8-203ENST00000417814 FEN1P39748 380 aaKnown RBP12.88□□□□□ -0.35
TNFRSF8-203ENST00000417814 CTSOP43234 321 aaPredicted RBP12.88□□□□□ -0.35
TNFRSF8-203ENST00000417814 CHIT1Q13231 466 aa12.88□□□□□ -0.35
TNFRSF8-203ENST00000417814 NAE1Q13564 534 aa12.88□□□□□ -0.35
TNFRSF8-203ENST00000417814 MANEALQ5VSG8 457 aa12.88□□□□□ -0.35
TNFRSF8-203ENST00000417814 Q6ZNX1 250 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms