RNA–Protein interactions for RNA: ENST00000417172.5

CALD1-204, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 1,915 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-204ENST00000417172 PRDM8Q9NQV8 689 aa16.49■□□□□ 0.23
CALD1-204ENST00000417172 TXLNGQ9NUQ3 528 aa16.49■□□□□ 0.23
CALD1-204ENST00000417172 KLQ9UEF7 1012 aa16.49■□□□□ 0.23
CALD1-204ENST00000417172 SH2B3Q9UQQ2 575 aa16.49■□□□□ 0.23
CALD1-204ENST00000417172 SIT1Q9Y3P8 196 aa16.49■□□□□ 0.23
CALD1-204ENST00000417172 OR52A4PA6NMU1 304 aa16.49■□□□□ 0.23
CALD1-204ENST00000417172 EML2O95834 649 aa16.49■□□□□ 0.23
CALD1-204ENST00000417172 HOXC4P09017 264 aaPredicted RBP16.49■□□□□ 0.23
CALD1-204ENST00000417172 AOC1P19801 751 aa16.49■□□□□ 0.23
CALD1-204ENST00000417172 HMOX2P30519 316 aa16.49■□□□□ 0.23
CALD1-204ENST00000417172 OXTRP30559 389 aa16.49■□□□□ 0.23
CALD1-204ENST00000417172 MAPK9P45984 424 aa16.49■□□□□ 0.23
CALD1-204ENST00000417172 THOP1P52888 689 aa16.49■□□□□ 0.23
CALD1-204ENST00000417172 TBPL1P62380 186 aa16.49■□□□□ 0.23
CALD1-204ENST00000417172 KLF10Q13118 480 aa16.49■□□□□ 0.23
CALD1-204ENST00000417172 KRT72Q14CN4 511 aa16.49■□□□□ 0.23
CALD1-204ENST00000417172 CPSF6Q16630 551 aaKnown RBP eCLIP16.49■□□□□ 0.23
CALD1-204ENST00000417172 SGO1Q5FBB7 561 aa16.49■□□□□ 0.23
CALD1-204ENST00000417172 METTL21CQ5VZV1 264 aa16.49■□□□□ 0.23
CALD1-204ENST00000417172 METTL2BQ6P1Q9 378 aaKnown RBP16.49■□□□□ 0.23
CALD1-204ENST00000417172 IL27RAQ6UWB1 636 aa16.49■□□□□ 0.23
CALD1-204ENST00000417172 UNC5DQ6UXZ4 953 aa16.49■□□□□ 0.23
CALD1-204ENST00000417172 FBXO15Q8NCQ5 510 aaPredicted RBP16.49■□□□□ 0.23
CALD1-204ENST00000417172 OR56A3Q8NH54 315 aa16.49■□□□□ 0.23
CALD1-204ENST00000417172 STON2Q8WXE9 905 aa16.49■□□□□ 0.23
CALD1-204ENST00000417172 TUBGCP3Q96CW5 907 aa16.49■□□□□ 0.23
CALD1-204ENST00000417172 MTFMTQ96DP5 389 aaKnown RBP16.49■□□□□ 0.23
CALD1-204ENST00000417172 C12orf66Q96MD2 445 aa16.49■□□□□ 0.23
CALD1-204ENST00000417172 NUSAP1Q9BXS6 441 aaKnown RBP16.49■□□□□ 0.23
CALD1-204ENST00000417172 TMEM168Q9H0V1 697 aa16.49■□□□□ 0.23
CALD1-204ENST00000417172 SCHIP1Q9P0W5 487 aaPredicted RBP16.49■□□□□ 0.23
CALD1-204ENST00000417172 A0A0C4DFX4 3053 aa16.48■□□□□ 0.23
CALD1-204ENST00000417172 PLXND1Q9Y4D7 1925 aa16.48■□□□□ 0.23
CALD1-204ENST00000417172 MEI4A8MW99 385 aa16.48■□□□□ 0.23
CALD1-204ENST00000417172 E7EQ34 232 aa16.48■□□□□ 0.23
CALD1-204ENST00000417172 PRAMEF26H0Y7S4 382 aa16.48■□□□□ 0.23
CALD1-204ENST00000417172 PEX11AO75192 247 aa16.48■□□□□ 0.23
CALD1-204ENST00000417172 ZNF217O75362 1048 aa16.48■□□□□ 0.23
CALD1-204ENST00000417172 CD22P20273 847 aa16.48■□□□□ 0.23
CALD1-204ENST00000417172 KCNJ2P63252 427 aa16.48■□□□□ 0.23
CALD1-204ENST00000417172 DMWDQ09019 674 aa16.48■□□□□ 0.23
CALD1-204ENST00000417172 ALG11Q2TAA5 492 aa16.48■□□□□ 0.23
CALD1-204ENST00000417172 ZNF542PQ5EBM4 170 aa16.48■□□□□ 0.23
CALD1-204ENST00000417172 XKR7Q5GH72 579 aa16.48■□□□□ 0.23
CALD1-204ENST00000417172 CAPRIN2Q6IMN6 1127 aaKnown RBP16.48■□□□□ 0.23
CALD1-204ENST00000417172 RINLQ6ZS11 566 aa16.48■□□□□ 0.23
CALD1-204ENST00000417172 ABI3BPQ7Z7G0 1075 aa16.48■□□□□ 0.23
CALD1-204ENST00000417172 KIRREL3Q8IZU9 778 aa16.48■□□□□ 0.23
CALD1-204ENST00000417172 HMGCLL1Q8TB92 370 aa16.48■□□□□ 0.23
CALD1-204ENST00000417172 SLC6A18Q96N87 628 aa16.48■□□□□ 0.23
CALD1-204ENST00000417172 ACTR5Q9H9F9 607 aaPredicted RBP16.48■□□□□ 0.23
CALD1-204ENST00000417172 IMP3Q9NV31 184 aaKnown RBP16.48■□□□□ 0.23
CALD1-204ENST00000417172 SDK1Q7Z5N4 2213 aa16.48■□□□□ 0.23
CALD1-204ENST00000417172 LOC100653049A0A140TA62 436 aa16.47■□□□□ 0.23
CALD1-204ENST00000417172 PDZK1P1A8MUH7 402 aa16.47■□□□□ 0.23
CALD1-204ENST00000417172 IFRD1O00458 451 aaPredicted RBP16.47■□□□□ 0.23
CALD1-204ENST00000417172 PI15O43692 258 aa16.47■□□□□ 0.23
CALD1-204ENST00000417172 KRT34O76011 436 aa16.47■□□□□ 0.23
CALD1-204ENST00000417172 RASGRP1O95267 797 aa16.47■□□□□ 0.23
CALD1-204ENST00000417172 CLDN9O95484 217 aa16.47■□□□□ 0.23
CALD1-204ENST00000417172 CHEK2O96017 543 aa16.47■□□□□ 0.23
CALD1-204ENST00000417172 EBLN1P0CF75 366 aa16.47■□□□□ 0.23
CALD1-204ENST00000417172 ESRRAP11474 423 aaPredicted RBP16.47■□□□□ 0.23
CALD1-204ENST00000417172 MAOBP27338 520 aa16.47■□□□□ 0.23
CALD1-204ENST00000417172 HTR1BP28222 390 aa16.47■□□□□ 0.23
CALD1-204ENST00000417172 CTBSQ01459 385 aa16.47■□□□□ 0.23
CALD1-204ENST00000417172 CDC16Q13042 620 aa16.47■□□□□ 0.23
CALD1-204ENST00000417172 CHSY3Q70JA7 882 aa16.47■□□□□ 0.23
CALD1-204ENST00000417172 ASRGL1Q7L266 308 aa16.47■□□□□ 0.23
CALD1-204ENST00000417172 DCUN1D3Q8IWE4 304 aa16.47■□□□□ 0.23
CALD1-204ENST00000417172 GJD3Q8N144 294 aa16.47■□□□□ 0.23
CALD1-204ENST00000417172 OR5K2Q8NHB8 316 aa16.47■□□□□ 0.23
CALD1-204ENST00000417172 ATL1Q8WXF7 558 aa16.47■□□□□ 0.23
CALD1-204ENST00000417172 TCEAL2Q9H3H9 227 aaPredicted RBP16.47■□□□□ 0.23
CALD1-204ENST00000417172 TBC1D29Q9UFV1 150 aa16.47■□□□□ 0.23
CALD1-204ENST00000417172 TRPS1Q9UHF7 1281 aa16.47■□□□□ 0.23
CALD1-204ENST00000417172 ACSL5Q9ULC5 683 aa16.47■□□□□ 0.23
CALD1-204ENST00000417172 CAPN7Q9Y6W3 813 aa16.47■□□□□ 0.23
CALD1-204ENST00000417172 KCNE1BA0A087WTH5 132 aa16.47■□□□□ 0.23
CALD1-204ENST00000417172 UBDO15205 165 aa16.47■□□□□ 0.23
CALD1-204ENST00000417172 PIK3R1P27986 724 aa16.47■□□□□ 0.23
CALD1-204ENST00000417172 HALP42357 657 aa16.47■□□□□ 0.23
CALD1-204ENST00000417172 CCR3P51677 355 aa16.47■□□□□ 0.23
CALD1-204ENST00000417172 NEK2P51955 445 aa16.47■□□□□ 0.23
CALD1-204ENST00000417172 NME5P56597 212 aa16.47■□□□□ 0.23
CALD1-204ENST00000417172 SRP54P61011 504 aaKnown RBP16.47■□□□□ 0.23
CALD1-204ENST00000417172 YBX1P67809 324 aaKnown RBP16.47■□□□□ 0.23
CALD1-204ENST00000417172 CHIT1Q13231 466 aa16.47■□□□□ 0.23
CALD1-204ENST00000417172 SLC30A9Q6PML9 568 aa16.47■□□□□ 0.23
CALD1-204ENST00000417172 Q6ZSR9 355 aa16.47■□□□□ 0.23
CALD1-204ENST00000417172 HID1Q8IV36 788 aa16.47■□□□□ 0.23
CALD1-204ENST00000417172 LRRC56Q8IYG6 542 aaPredicted RBP16.47■□□□□ 0.23
CALD1-204ENST00000417172 RNF175Q8N4F7 328 aa16.47■□□□□ 0.23
CALD1-204ENST00000417172 KLHL29Q96CT2 875 aa16.47■□□□□ 0.23
CALD1-204ENST00000417172 TAGLN3Q9UI15 199 aa16.47■□□□□ 0.23
CALD1-204ENST00000417172 KLF15Q9UIH9 416 aa16.47■□□□□ 0.23
CALD1-204ENST00000417172 HS3ST3A1Q9Y663 406 aa16.47■□□□□ 0.23
CALD1-204ENST00000417172 SNRNP200O75643 2136 aaKnown RBP16.46■□□□□ 0.23
CALD1-204ENST00000417172 A0A1W2PPC4 97 aa16.46■□□□□ 0.23
CALD1-204ENST00000417172 E7ENX8 843 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms