RNA–Protein interactions for RNA: ENST00000413911.1

AC005540.1-201, humanhuman

TSL 3 BASIC

Gene AC005540.1, Length 919 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005540.1-201ENST00000413911 OR56A5P0C7T3 313 aa23.42■■□□□ 1.34
AC005540.1-201ENST00000413911 GRIA1P42261 906 aa23.42■■□□□ 1.34
AC005540.1-201ENST00000413911 SEMA3AQ14563 771 aa23.42■■□□□ 1.34
AC005540.1-201ENST00000413911 P3H1Q32P28 736 aa23.42■■□□□ 1.34
AC005540.1-201ENST00000413911 LYPLAL1Q5VWZ2 237 aa23.42■■□□□ 1.34
AC005540.1-201ENST00000413911 ZNF534Q76KX8 674 aa23.42■■□□□ 1.34
AC005540.1-201ENST00000413911 MAMDC2Q7Z304 686 aaPredicted RBP23.42■■□□□ 1.34
AC005540.1-201ENST00000413911 IL17FQ96PD4 163 aa23.42■■□□□ 1.34
AC005540.1-201ENST00000413911 ALS2CR12Q96Q35 445 aa23.42■■□□□ 1.34
AC005540.1-201ENST00000413911 PANX2Q96RD6 677 aa23.42■■□□□ 1.34
AC005540.1-201ENST00000413911 NDC1Q9BTX1 674 aa23.42■■□□□ 1.34
AC005540.1-201ENST00000413911 ILKAPQ9H0C8 392 aaPredicted RBP23.42■■□□□ 1.34
AC005540.1-201ENST00000413911 PCDHGA10Q9Y5H3 936 aa23.42■■□□□ 1.34
AC005540.1-201ENST00000413911 PCM1Q15154 2024 aa23.42■■□□□ 1.34
AC005540.1-201ENST00000413911 LRBAP50851 2863 aa23.41■■□□□ 1.34
AC005540.1-201ENST00000413911 MDC1Q14676 2089 aaKnown RBP23.41■■□□□ 1.34
AC005540.1-201ENST00000413911 A0A0U1RQJ8 604 aa23.41■■□□□ 1.34
AC005540.1-201ENST00000413911 AGPSO00116 658 aa23.41■■□□□ 1.34
AC005540.1-201ENST00000413911 GOT2P00505 430 aaKnown RBP23.41■■□□□ 1.34
AC005540.1-201ENST00000413911 ALAS2P22557 587 aa23.41■■□□□ 1.34
AC005540.1-201ENST00000413911 COX15Q7KZN9 410 aa23.41■■□□□ 1.34
AC005540.1-201ENST00000413911 MCATQ8IVS2 390 aaKnown RBP23.41■■□□□ 1.34
AC005540.1-201ENST00000413911 SLC22A15Q8IZD6 547 aa23.41■■□□□ 1.34
AC005540.1-201ENST00000413911 TTC13Q8NBP0 860 aa23.41■■□□□ 1.34
AC005540.1-201ENST00000413911 ZDHHC19Q8WVZ1 309 aaPredicted RBP23.41■■□□□ 1.34
AC005540.1-201ENST00000413911 SLC6A20Q9NP91 592 aa23.41■■□□□ 1.34
AC005540.1-201ENST00000413911 ATP13A2Q9NQ11 1180 aa23.41■■□□□ 1.34
AC005540.1-201ENST00000413911 ANKUB1A6NFN9 424 aa23.4■■□□□ 1.34
AC005540.1-201ENST00000413911 IQCF5A8MTL0 148 aa23.4■■□□□ 1.34
AC005540.1-201ENST00000413911 ZNF189O75820 626 aaPredicted RBP23.4■■□□□ 1.34
AC005540.1-201ENST00000413911 IGHEP01854 428 aa23.4■■□□□ 1.34
AC005540.1-201ENST00000413911 CD63P08962 238 aa23.4■■□□□ 1.34
AC005540.1-201ENST00000413911 MCM3P25205 808 aa23.4■■□□□ 1.34
AC005540.1-201ENST00000413911 DCTP40126 519 aa23.4■■□□□ 1.34
AC005540.1-201ENST00000413911 GRIA3P42263 894 aa23.4■■□□□ 1.34
AC005540.1-201ENST00000413911 RAB28P51157 221 aa23.4■■□□□ 1.34
AC005540.1-201ENST00000413911 PLOD1Q02809 727 aaPredicted RBP23.4■■□□□ 1.34
AC005540.1-201ENST00000413911 CYP2A13Q16696 494 aa23.4■■□□□ 1.34
AC005540.1-201ENST00000413911 FCRL6Q6DN72 434 aa23.4■■□□□ 1.34
AC005540.1-201ENST00000413911 TTLL10Q6ZVT0 673 aa23.4■■□□□ 1.34
AC005540.1-201ENST00000413911 TAX1BP1Q86VP1 789 aa23.4■■□□□ 1.34
AC005540.1-201ENST00000413911 DTWD1Q8N5C7 304 aa23.4■■□□□ 1.34
AC005540.1-201ENST00000413911 FBXL4Q9UKA2 621 aa23.4■■□□□ 1.34
AC005540.1-201ENST00000413911 AMFRQ9UKV5 643 aa23.4■■□□□ 1.34
AC005540.1-201ENST00000413911 COPG1Q9Y678 874 aaKnown RBP23.4■■□□□ 1.34
AC005540.1-201ENST00000413911 NUP210LQ5VU65 1888 aa23.4■■□□□ 1.34
AC005540.1-201ENST00000413911 DOCK10Q96BY6 2186 aa23.4■■□□□ 1.34
AC005540.1-201ENST00000413911 POLEQ07864 2286 aa23.39■■□□□ 1.34
AC005540.1-201ENST00000413911 GOLGA6L9A6NEM1 432 aa23.39■■□□□ 1.33
AC005540.1-201ENST00000413911 SOCS6O14544 535 aa23.39■■□□□ 1.33
AC005540.1-201ENST00000413911 PSMD3O43242 534 aa23.39■■□□□ 1.33
AC005540.1-201ENST00000413911 GPC4O75487 556 aa23.39■■□□□ 1.33
AC005540.1-201ENST00000413911 ONECUT2O95948 504 aa23.39■■□□□ 1.33
AC005540.1-201ENST00000413911 GLRBP48167 497 aa23.39■■□□□ 1.33
AC005540.1-201ENST00000413911 HSPA14Q0VDF9 509 aa23.39■■□□□ 1.33
AC005540.1-201ENST00000413911 HIF1AQ16665 826 aa23.39■■□□□ 1.33
AC005540.1-201ENST00000413911 DNAJC21Q5F1R6 531 aaKnown RBP23.39■■□□□ 1.33
AC005540.1-201ENST00000413911 TSTD2Q5T7W7 516 aa23.39■■□□□ 1.33
AC005540.1-201ENST00000413911 OVCH1Q7RTY7 1134 aa23.39■■□□□ 1.33
AC005540.1-201ENST00000413911 PEX26Q7Z412 305 aa23.39■■□□□ 1.33
AC005540.1-201ENST00000413911 ZADH2Q8N4Q0 377 aa23.39■■□□□ 1.33
AC005540.1-201ENST00000413911 ATG4AQ8WYN0 398 aa23.39■■□□□ 1.33
AC005540.1-201ENST00000413911 SPSB2Q99619 263 aa23.39■■□□□ 1.33
AC005540.1-201ENST00000413911 MESP1Q9BRJ9 268 aa23.39■■□□□ 1.33
AC005540.1-201ENST00000413911 ETNK1Q9HBU6 452 aa23.39■■□□□ 1.33
AC005540.1-201ENST00000413911 SLC5A6Q9Y289 635 aa23.39■■□□□ 1.33
AC005540.1-201ENST00000413911 CREBBPQ92793 2442 aa23.38■■□□□ 1.33
AC005540.1-201ENST00000413911 IPO13O94829 963 aaKnown RBP23.38■■□□□ 1.33
AC005540.1-201ENST00000413911 FTCDO95954 541 aa23.38■■□□□ 1.33
AC005540.1-201ENST00000413911 CD9P21926 228 aa23.38■■□□□ 1.33
AC005540.1-201ENST00000413911 MMP11P24347 488 aa23.38■■□□□ 1.33
AC005540.1-201ENST00000413911 ITGA3P26006 1051 aa23.38■■□□□ 1.33
AC005540.1-201ENST00000413911 ACVR1Q04771 509 aa23.38■■□□□ 1.33
AC005540.1-201ENST00000413911 CDH17Q12864 832 aa23.38■■□□□ 1.33
AC005540.1-201ENST00000413911 NKG7Q16617 165 aa23.38■■□□□ 1.33
AC005540.1-201ENST00000413911 SHISA6Q6ZSJ9 500 aa23.38■■□□□ 1.33
AC005540.1-201ENST00000413911 LINC00523Q86TU6 105 aa23.38■■□□□ 1.33
AC005540.1-201ENST00000413911 LDB1Q86U70 411 aaPredicted RBP23.38■■□□□ 1.33
AC005540.1-201ENST00000413911 DNAAF3Q8N9W5 541 aa23.38■■□□□ 1.33
AC005540.1-201ENST00000413911 CFAP61Q8NHU2 1237 aa23.38■■□□□ 1.33
AC005540.1-201ENST00000413911 HS3ST3B1Q9Y662 390 aa23.38■■□□□ 1.33
AC005540.1-201ENST00000413911 A0A1B0GX78 115 aa23.37■■□□□ 1.33
AC005540.1-201ENST00000413911 PTMAP06454 111 aaKnown RBP23.37■■□□□ 1.33
AC005540.1-201ENST00000413911 AIMP2Q13155 320 aaKnown RBP23.37■■□□□ 1.33
AC005540.1-201ENST00000413911 AFTPHQ6ULP2 937 aa23.37■■□□□ 1.33
AC005540.1-201ENST00000413911 KIRREL2Q6UWL6 708 aa23.37■■□□□ 1.33
AC005540.1-201ENST00000413911 PRUNE1Q86TP1 453 aa23.37■■□□□ 1.33
AC005540.1-201ENST00000413911 KRT222Q8N1A0 295 aa23.37■■□□□ 1.33
AC005540.1-201ENST00000413911 OR4L1Q8NH43 312 aa23.37■■□□□ 1.33
AC005540.1-201ENST00000413911 UBE2Q2Q8WVN8 375 aa23.37■■□□□ 1.33
AC005540.1-201ENST00000413911 FKBP10Q96AY3 582 aa23.37■■□□□ 1.33
AC005540.1-201ENST00000413911 CSMD1Q96PZ7 3565 aa23.36■■□□□ 1.33
AC005540.1-201ENST00000413911 HEATR9A2RTY3 570 aa23.36■■□□□ 1.33
AC005540.1-201ENST00000413911 KRT87PA6NCN2 255 aa23.36■■□□□ 1.33
AC005540.1-201ENST00000413911 PRICKLE3O43900 615 aaPredicted RBP23.36■■□□□ 1.33
AC005540.1-201ENST00000413911 SUN1O94901 812 aa23.36■■□□□ 1.33
AC005540.1-201ENST00000413911 MED26O95402 600 aa23.36■■□□□ 1.33
AC005540.1-201ENST00000413911 PRAMEF13Q5VWM6 474 aa23.36■■□□□ 1.33
AC005540.1-201ENST00000413911 FIGLAQ6QHK4 219 aa23.36■■□□□ 1.33
AC005540.1-201ENST00000413911 IGFL2Q6UWQ7 119 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms