RNA–Protein interactions for RNA: ENST00000413806.7

SMARCA4-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,512 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-202ENST00000413806 SUSD3Q96L08 255 aa13.47□□□□□ -0.25
SMARCA4-202ENST00000413806 EQTNQ9NQ60 294 aa13.47□□□□□ -0.25
SMARCA4-202ENST00000413806 BOLA2-SMG1P6H3BVE0 249 aa13.46□□□□□ -0.25
SMARCA4-202ENST00000413806 LINGO3P0C6S8 592 aa13.46□□□□□ -0.25
SMARCA4-202ENST00000413806 GNAZP19086 355 aa13.46□□□□□ -0.25
SMARCA4-202ENST00000413806 KHKP50053 298 aa13.46□□□□□ -0.25
SMARCA4-202ENST00000413806 MERTKQ12866 999 aa13.46□□□□□ -0.25
SMARCA4-202ENST00000413806 WSCD2Q2TBF2 565 aa13.46□□□□□ -0.25
SMARCA4-202ENST00000413806 GET4Q7L5D6 327 aaPredicted RBP13.46□□□□□ -0.25
SMARCA4-202ENST00000413806 GPR22Q99680 433 aa13.46□□□□□ -0.25
SMARCA4-202ENST00000413806 FEM1AQ9BSK4 669 aa13.46□□□□□ -0.25
SMARCA4-202ENST00000413806 OAS3Q9Y6K5 1087 aaKnown RBP13.46□□□□□ -0.25
SMARCA4-202ENST00000413806 COL1A1P02452 1464 aaPredicted RBP13.46□□□□□ -0.25
SMARCA4-202ENST00000413806 ZSCAN5BA6NJL1 495 aa13.46□□□□□ -0.25
SMARCA4-202ENST00000413806 RIIAD1A6NNX1 92 aa13.46□□□□□ -0.25
SMARCA4-202ENST00000413806 H0YGN5 161 aa13.46□□□□□ -0.25
SMARCA4-202ENST00000413806 MT-ND1P03886 318 aa13.46□□□□□ -0.25
SMARCA4-202ENST00000413806 LAMP2P13473 410 aa13.46□□□□□ -0.25
SMARCA4-202ENST00000413806 OGDHQ02218 1023 aa13.46□□□□□ -0.25
SMARCA4-202ENST00000413806 MPP2Q14168 576 aa13.46□□□□□ -0.25
SMARCA4-202ENST00000413806 ZBTB6Q15916 424 aa13.46□□□□□ -0.25
SMARCA4-202ENST00000413806 ASCC1Q8N9N2 400 aaKnown RBP13.46□□□□□ -0.25
SMARCA4-202ENST00000413806 DENND6BQ8NEG7 585 aa13.46□□□□□ -0.25
SMARCA4-202ENST00000413806 SCAMP5Q8TAC9 235 aa13.46□□□□□ -0.25
SMARCA4-202ENST00000413806 EMID1Q96A84 441 aaPredicted RBP13.46□□□□□ -0.25
SMARCA4-202ENST00000413806 RFT1Q96AA3 541 aa13.46□□□□□ -0.25
SMARCA4-202ENST00000413806 DEFB118Q96PH6 123 aa13.46□□□□□ -0.25
SMARCA4-202ENST00000413806 DUSP26Q9BV47 211 aa13.46□□□□□ -0.25
SMARCA4-202ENST00000413806 NFS1Q9Y697 457 aa13.46□□□□□ -0.25
SMARCA4-202ENST00000413806 FFAR2O15552 330 aa13.46□□□□□ -0.25
SMARCA4-202ENST00000413806 PTPN2P17706 415 aa13.46□□□□□ -0.25
SMARCA4-202ENST00000413806 ACADLP28330 430 aa13.46□□□□□ -0.25
SMARCA4-202ENST00000413806 HSD17B2P37059 387 aa13.46□□□□□ -0.25
SMARCA4-202ENST00000413806 ALDH3A2P51648 485 aa13.46□□□□□ -0.25
SMARCA4-202ENST00000413806 LRRC70Q7Z2Q7 622 aa13.46□□□□□ -0.25
SMARCA4-202ENST00000413806 ZC3HC1Q86WB0 502 aaKnown RBP13.46□□□□□ -0.25
SMARCA4-202ENST00000413806 ARL14EPQ8N8R7 260 aaPredicted RBP13.46□□□□□ -0.25
SMARCA4-202ENST00000413806 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.46□□□□□ -0.26
SMARCA4-202ENST00000413806 TBX10O75333 385 aa13.46□□□□□ -0.26
SMARCA4-202ENST00000413806 PCCBP05166 539 aa13.46□□□□□ -0.26
SMARCA4-202ENST00000413806 GRIA1P42261 906 aa13.46□□□□□ -0.26
SMARCA4-202ENST00000413806 MTPNP58546 118 aa13.46□□□□□ -0.26
SMARCA4-202ENST00000413806 ARF3P61204 181 aaPredicted RBP13.46□□□□□ -0.26
SMARCA4-202ENST00000413806 STXBP1P61764 594 aaKnown RBP13.46□□□□□ -0.26
SMARCA4-202ENST00000413806 ARF1P84077 181 aaKnown RBP13.46□□□□□ -0.26
SMARCA4-202ENST00000413806 PPP2R2BQ00005 443 aa13.46□□□□□ -0.26
SMARCA4-202ENST00000413806 DAG1Q14118 895 aa13.46□□□□□ -0.26
SMARCA4-202ENST00000413806 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.46□□□□□ -0.261e-7■■■■■ 34.5
SMARCA4-202ENST00000413806 TMEM214Q6NUQ4 689 aaKnown RBP13.46□□□□□ -0.26
SMARCA4-202ENST00000413806 RANBP3LQ86VV4 465 aaPredicted RBP13.46□□□□□ -0.26
SMARCA4-202ENST00000413806 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.46□□□□□ -0.26
SMARCA4-202ENST00000413806 GPR65Q8IYL9 337 aa13.46□□□□□ -0.26
SMARCA4-202ENST00000413806 SAMD14Q8IZD0 417 aaPredicted RBP13.46□□□□□ -0.26
SMARCA4-202ENST00000413806 NATD1Q8N6N6 113 aa13.46□□□□□ -0.26
SMARCA4-202ENST00000413806 DDX1Q92499 740 aaKnown RBP13.46□□□□□ -0.26
SMARCA4-202ENST00000413806 ACDQ96AP0 544 aa13.46□□□□□ -0.26
SMARCA4-202ENST00000413806 SMOC2Q9H3U7 446 aa13.46□□□□□ -0.26
SMARCA4-202ENST00000413806 USP29Q9HBJ7 922 aa13.46□□□□□ -0.26
SMARCA4-202ENST00000413806 THUMPD1Q9NXG2 353 aaKnown RBP13.46□□□□□ -0.26
SMARCA4-202ENST00000413806 hCG_2039718K7EN88 272 aa13.45□□□□□ -0.26
SMARCA4-202ENST00000413806 SNX4O95219 450 aa13.45□□□□□ -0.26
SMARCA4-202ENST00000413806 ARFIP1P53367 373 aa13.45□□□□□ -0.26
SMARCA4-202ENST00000413806 RABGGTBP53611 331 aa13.45□□□□□ -0.26
SMARCA4-202ENST00000413806 GALNT2Q10471 571 aa13.45□□□□□ -0.26
SMARCA4-202ENST00000413806 DNASE1L3Q13609 305 aa13.45□□□□□ -0.26
SMARCA4-202ENST00000413806 ZNF423Q2M1K9 1284 aa13.45□□□□□ -0.26
SMARCA4-202ENST00000413806 SIRPB2Q5JXA9 342 aa13.45□□□□□ -0.26
SMARCA4-202ENST00000413806 TMEM220Q6QAJ8 160 aa13.45□□□□□ -0.26
SMARCA4-202ENST00000413806 ANKRD46Q86W74 232 aa13.45□□□□□ -0.26
SMARCA4-202ENST00000413806 ZNF563Q8TA94 476 aa13.45□□□□□ -0.26
SMARCA4-202ENST00000413806 LRRC58Q96CX6 371 aa13.45□□□□□ -0.26
SMARCA4-202ENST00000413806 BRINP2Q9C0B6 783 aa13.45□□□□□ -0.26
SMARCA4-202ENST00000413806 FAM53CQ9NYF3 392 aa13.45□□□□□ -0.26
SMARCA4-202ENST00000413806 SLC17A6Q9P2U8 582 aa13.45□□□□□ -0.26
SMARCA4-202ENST00000413806 ASB3Q9Y575 518 aa13.45□□□□□ -0.26
SMARCA4-202ENST00000413806 PDPK1O15530 556 aa13.45□□□□□ -0.26
SMARCA4-202ENST00000413806 ECI2O75521 394 aa13.45□□□□□ -0.26
SMARCA4-202ENST00000413806 ZNF155Q12901 538 aaPredicted RBP13.45□□□□□ -0.26
SMARCA4-202ENST00000413806 OR52J3Q8NH60 311 aa13.45□□□□□ -0.26
SMARCA4-202ENST00000413806 WFIKKN2Q8TEU8 576 aa13.45□□□□□ -0.26
SMARCA4-202ENST00000413806 SLC29A3Q9BZD2 475 aa13.45□□□□□ -0.26
SMARCA4-202ENST00000413806 DUS2Q9NX74 493 aaKnown RBP13.45□□□□□ -0.26
SMARCA4-202ENST00000413806 NR2E3Q9Y5X4 410 aa13.45□□□□□ -0.26
SMARCA4-202ENST00000413806 IQCF5A8MTL0 148 aa13.45□□□□□ -0.26
SMARCA4-202ENST00000413806 PI15O43692 258 aa13.45□□□□□ -0.26
SMARCA4-202ENST00000413806 SAGP10523 405 aaPredicted RBP13.45□□□□□ -0.26
SMARCA4-202ENST00000413806 PRPS1L1P21108 318 aa13.45□□□□□ -0.26
SMARCA4-202ENST00000413806 SP2Q02086 613 aa13.45□□□□□ -0.26
SMARCA4-202ENST00000413806 GAD2Q05329 585 aa13.45□□□□□ -0.26
SMARCA4-202ENST00000413806 LAPTM4BQ86VI4 370 aa13.45□□□□□ -0.26
SMARCA4-202ENST00000413806 OR13C4Q8NGS5 318 aa13.45□□□□□ -0.26
SMARCA4-202ENST00000413806 ZNF514Q96K75 400 aaPredicted RBP13.45□□□□□ -0.26
SMARCA4-202ENST00000413806 RAB11FIP5Q9BXF6 653 aa13.45□□□□□ -0.26
SMARCA4-202ENST00000413806 ZNF358Q9NW07 568 aa13.45□□□□□ -0.26
SMARCA4-202ENST00000413806 TESMINQ9Y4I5 508 aa13.45□□□□□ -0.26
SMARCA4-202ENST00000413806 FBP2O00757 339 aa13.45□□□□□ -0.26
SMARCA4-202ENST00000413806 GADD45GO95257 159 aa13.45□□□□□ -0.26
SMARCA4-202ENST00000413806 CBSLP0DN79 551 aa13.45□□□□□ -0.26
SMARCA4-202ENST00000413806 ANXA8P13928 327 aa13.45□□□□□ -0.26
SMARCA4-202ENST00000413806 CBSP35520 551 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms