RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 A3GALT2U3KPV4 340 aa17.23■□□□□ 0.35
SDCBP-202ENST00000413219 OR2A25A4D2G3 310 aa17.22■□□□□ 0.35
SDCBP-202ENST00000413219 ANKRD66B4E2M5 251 aa17.22■□□□□ 0.35
SDCBP-202ENST00000413219 INPPL1O15357 1258 aa17.22■□□□□ 0.35
SDCBP-202ENST00000413219 FAM20BO75063 409 aa17.22■□□□□ 0.35
SDCBP-202ENST00000413219 FKBP9O95302 570 aa17.22■□□□□ 0.35
SDCBP-202ENST00000413219 FADS2O95864 444 aaKnown RBP17.22■□□□□ 0.35
SDCBP-202ENST00000413219 FPR1P21462 350 aa17.22■□□□□ 0.35
SDCBP-202ENST00000413219 S100A1P23297 94 aa17.22■□□□□ 0.35
SDCBP-202ENST00000413219 DNAJA1P31689 397 aaKnown RBP17.22■□□□□ 0.35
SDCBP-202ENST00000413219 GRK4P32298 578 aa17.22■□□□□ 0.35
SDCBP-202ENST00000413219 RGS4P49798 205 aa17.22■□□□□ 0.35
SDCBP-202ENST00000413219 CSNK2BP67870 215 aa17.22■□□□□ 0.35
SDCBP-202ENST00000413219 CACNG1Q06432 222 aa17.22■□□□□ 0.35
SDCBP-202ENST00000413219 TTLL9Q3SXZ7 439 aa17.22■□□□□ 0.35
SDCBP-202ENST00000413219 CARD16Q5EG05 197 aa17.22■□□□□ 0.35
SDCBP-202ENST00000413219 SUSD1Q6UWL2 747 aa17.22■□□□□ 0.35
SDCBP-202ENST00000413219 TAS2R42Q7RTR8 314 aa17.22■□□□□ 0.35
SDCBP-202ENST00000413219 FAM9CQ8IZT9 166 aa17.22■□□□□ 0.35
SDCBP-202ENST00000413219 PGBD3Q8N328 593 aa17.22■□□□□ 0.35
SDCBP-202ENST00000413219 KLHDC9Q8NEP7 349 aa17.22■□□□□ 0.35
SDCBP-202ENST00000413219 MCFD2Q8NI22 146 aa17.22■□□□□ 0.35
SDCBP-202ENST00000413219 FCGR1BQ92637 280 aa17.22■□□□□ 0.35
SDCBP-202ENST00000413219 ZHX1-C8orf76Q96EF9 292 aa17.22■□□□□ 0.35
SDCBP-202ENST00000413219 NTMT1Q9BV86 223 aa17.22■□□□□ 0.35
SDCBP-202ENST00000413219 FAM126AQ9BYI3 521 aaPredicted RBP17.22■□□□□ 0.35
SDCBP-202ENST00000413219 SLC29A3Q9BZD2 475 aa17.22■□□□□ 0.35
SDCBP-202ENST00000413219 PCDH12Q9NPG4 1184 aa17.22■□□□□ 0.35
SDCBP-202ENST00000413219 SERHLQ9NQF3 203 aa17.22■□□□□ 0.35
SDCBP-202ENST00000413219 SLC6A13Q9NSD5 602 aa17.22■□□□□ 0.35
SDCBP-202ENST00000413219 ELOVL2Q9NXB9 296 aa17.22■□□□□ 0.35
SDCBP-202ENST00000413219 OPTCQ9UBM4 332 aa17.22■□□□□ 0.35
SDCBP-202ENST00000413219 ATP11BQ9Y2G3 1177 aa17.22■□□□□ 0.35
SDCBP-202ENST00000413219 MANBAO00462 879 aa17.22■□□□□ 0.35
SDCBP-202ENST00000413219 AREL1O15033 823 aa17.22■□□□□ 0.35
SDCBP-202ENST00000413219 EBLN1P0CF75 366 aa17.22■□□□□ 0.35
SDCBP-202ENST00000413219 CD36P16671 472 aa17.22■□□□□ 0.35
SDCBP-202ENST00000413219 HMGCS1Q01581 520 aa17.22■□□□□ 0.35
SDCBP-202ENST00000413219 DGCR6Q14129 220 aa17.22■□□□□ 0.35
SDCBP-202ENST00000413219 CATSPEREQ5SY80 951 aa17.22■□□□□ 0.35
SDCBP-202ENST00000413219 ZNF362Q5T0B9 420 aaPredicted RBP17.22■□□□□ 0.35
SDCBP-202ENST00000413219 SPRYD7Q5W111 196 aa17.22■□□□□ 0.35
SDCBP-202ENST00000413219 CERS6Q6ZMG9 384 aa17.22■□□□□ 0.35
SDCBP-202ENST00000413219 CEP68Q76N32 757 aa17.22■□□□□ 0.35
SDCBP-202ENST00000413219 SERINC5Q86VE9 423 aa17.22■□□□□ 0.35
SDCBP-202ENST00000413219 LYSMD2Q8IV50 215 aa17.22■□□□□ 0.35
SDCBP-202ENST00000413219 RGL4Q8IZJ4 473 aa17.22■□□□□ 0.35
SDCBP-202ENST00000413219 TTC29Q8NA56 475 aaPredicted RBP17.22■□□□□ 0.35
SDCBP-202ENST00000413219 USP7Q93009 1102 aa17.22■□□□□ 0.35
SDCBP-202ENST00000413219 SLC38A4Q969I6 547 aa17.22■□□□□ 0.35
SDCBP-202ENST00000413219 SMIM14Q96QK8 99 aa17.22■□□□□ 0.35
SDCBP-202ENST00000413219 PITX2Q99697 317 aa17.22■□□□□ 0.35
SDCBP-202ENST00000413219 CD244Q9BZW8 370 aa17.22■□□□□ 0.35
SDCBP-202ENST00000413219 ZNF408Q9H9D4 720 aa17.22■□□□□ 0.35
SDCBP-202ENST00000413219 ZFP14Q9HCL3 533 aa17.22■□□□□ 0.35
SDCBP-202ENST00000413219 KLQ9UEF7 1012 aa17.22■□□□□ 0.35
SDCBP-202ENST00000413219 AGO1Q9UL18 857 aaKnown RBP17.22■□□□□ 0.35
SDCBP-202ENST00000413219 ZNF490Q9ULM2 529 aaPredicted RBP17.22■□□□□ 0.35
SDCBP-202ENST00000413219 CHD5Q8TDI0 1954 aa17.22■□□□□ 0.35
SDCBP-202ENST00000413219 IQCF5A8MTL0 148 aa17.21■□□□□ 0.35
SDCBP-202ENST00000413219 EFCAB9A8MZ26 197 aa17.21■□□□□ 0.35
SDCBP-202ENST00000413219 ARVCFO00192 962 aa17.21■□□□□ 0.35
SDCBP-202ENST00000413219 F11P03951 625 aa17.21■□□□□ 0.35
SDCBP-202ENST00000413219 BCKDHAP12694 445 aa17.21■□□□□ 0.35
SDCBP-202ENST00000413219 CD52P31358 61 aa17.21■□□□□ 0.35
SDCBP-202ENST00000413219 PCYT1AP49585 367 aa17.21■□□□□ 0.35
SDCBP-202ENST00000413219 TPTEP56180 551 aa17.21■□□□□ 0.35
SDCBP-202ENST00000413219 CLDN8P56748 225 aa17.21■□□□□ 0.35
SDCBP-202ENST00000413219 NDUFA5Q16718 116 aa17.21■□□□□ 0.35
SDCBP-202ENST00000413219 PROX2Q3B8N5 592 aa17.21■□□□□ 0.35
SDCBP-202ENST00000413219 GDF6Q6KF10 455 aaPredicted RBP17.21■□□□□ 0.35
SDCBP-202ENST00000413219 NLGN2Q8NFZ4 835 aa17.21■□□□□ 0.35
SDCBP-202ENST00000413219 SGIP1Q9BQI5 828 aa17.21■□□□□ 0.35
SDCBP-202ENST00000413219 YIPF2Q9BWQ6 316 aa17.21■□□□□ 0.35
SDCBP-202ENST00000413219 BPIFA1Q9NP55 256 aa17.21■□□□□ 0.35
SDCBP-202ENST00000413219 FFAR3O14843 346 aa17.2■□□□□ 0.34
SDCBP-202ENST00000413219 GPR42O15529 346 aa17.2■□□□□ 0.34
SDCBP-202ENST00000413219 PTPN2P17706 415 aa17.2■□□□□ 0.34
SDCBP-202ENST00000413219 RPS3P23396 243 aaKnown RBP eCLIP17.2■□□□□ 0.341e-6■■■□□ 16.9
SDCBP-202ENST00000413219 PTPN6P29350 595 aa17.2■□□□□ 0.34
SDCBP-202ENST00000413219 S100A3P33764 101 aa17.2■□□□□ 0.34
SDCBP-202ENST00000413219 PPP3CCP48454 512 aa17.2■□□□□ 0.34
SDCBP-202ENST00000413219 CDH4P55283 916 aa17.2■□□□□ 0.34
SDCBP-202ENST00000413219 MAPK11Q15759 364 aa17.2■□□□□ 0.34
SDCBP-202ENST00000413219 KIAA1614Q5VZ46 1190 aa17.2■□□□□ 0.34
SDCBP-202ENST00000413219 MSANTD1Q6ZTZ1 278 aa17.2■□□□□ 0.34
SDCBP-202ENST00000413219 CCDC80Q76M96 950 aa17.2■□□□□ 0.34
SDCBP-202ENST00000413219 C10orf111Q8N326 155 aa17.2■□□□□ 0.34
SDCBP-202ENST00000413219 EFHBQ8N7U6 833 aa17.2■□□□□ 0.34
SDCBP-202ENST00000413219 ZNF513Q8N8E2 541 aaPredicted RBP17.2■□□□□ 0.34
SDCBP-202ENST00000413219 PSMA8Q8TAA3 256 aa17.2■□□□□ 0.34
SDCBP-202ENST00000413219 BARD1Q99728 777 aaKnown RBP17.2■□□□□ 0.34
SDCBP-202ENST00000413219 SPON2Q9BUD6 331 aa17.2■□□□□ 0.34
SDCBP-202ENST00000413219 ITPAQ9BY32 194 aa17.2■□□□□ 0.34
SDCBP-202ENST00000413219 PARVBQ9HBI1 364 aa17.2■□□□□ 0.34
SDCBP-202ENST00000413219 FARSBQ9NSD9 589 aaKnown RBP17.2■□□□□ 0.34
SDCBP-202ENST00000413219 CPA4Q9UI42 421 aa17.2■□□□□ 0.34
SDCBP-202ENST00000413219 E9PQ18 207 aa17.2■□□□□ 0.34
SDCBP-202ENST00000413219 NUAK1O60285 661 aa17.2■□□□□ 0.34
SDCBP-202ENST00000413219 SEMG1P04279 462 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms