RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 TMCO1Q9UM00 188 aa2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 WDR37Q9Y2I8 494 aa2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 RIMS2Q9UQ26 1411 aa2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 ABCA8O94911 1581 aa2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 CDC42BPBQ9Y5S2 1711 aa2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 MAP3K15Q6ZN16 1313 aa2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 SALL1Q9NSC2 1324 aa2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 MAGI1Q96QZ7 1491 aaPredicted RBP2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 MAP3K4Q9Y6R4 1608 aa2.39□□□□□ -2.03
HMGB3P2-201ENST00000411913 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP2.38□□□□□ -2.03
HMGB3P2-201ENST00000411913 LRRC7Q96NW7 1537 aa2.38□□□□□ -2.03
HMGB3P2-201ENST00000411913 DLC1Q96QB1 1528 aa2.38□□□□□ -2.03
HMGB3P2-201ENST00000411913 A0A087WWV3 80 aa2.38□□□□□ -2.03
HMGB3P2-201ENST00000411913 A0A0U1RQJ8 604 aa2.38□□□□□ -2.03
HMGB3P2-201ENST00000411913 A0A1B0GVG6 124 aa2.38□□□□□ -2.03
HMGB3P2-201ENST00000411913 A0A1B0GVM2 712 aa2.38□□□□□ -2.03
HMGB3P2-201ENST00000411913 C1orf226A1L170 272 aa2.38□□□□□ -2.03
HMGB3P2-201ENST00000411913 CTAGE9A4FU28 777 aa2.38□□□□□ -2.03
HMGB3P2-201ENST00000411913 VPS37CA5D8V6 355 aaPredicted RBP2.38□□□□□ -2.03
HMGB3P2-201ENST00000411913 GOLGA6L4A6NEF3 574 aa2.38□□□□□ -2.03
HMGB3P2-201ENST00000411913 CFAP73A6NFT4 308 aa2.38□□□□□ -2.03
HMGB3P2-201ENST00000411913 LRRC72A6NJI9 287 aa2.38□□□□□ -2.03
HMGB3P2-201ENST00000411913 ZNF233A6NK53 670 aa2.38□□□□□ -2.03
HMGB3P2-201ENST00000411913 A8MV72 311 aaPredicted RBP2.38□□□□□ -2.03
HMGB3P2-201ENST00000411913 KDM4EB2RXH2 506 aaPredicted RBP2.38□□□□□ -2.03
HMGB3P2-201ENST00000411913 E7ENQ6 273 aa2.38□□□□□ -2.03
HMGB3P2-201ENST00000411913 VCYO14598 125 aa2.38□□□□□ -2.03
HMGB3P2-201ENST00000411913 IFIT3O14879 490 aaKnown RBP2.38□□□□□ -2.03
HMGB3P2-201ENST00000411913 OGG1O15527 345 aa2.38□□□□□ -2.03
HMGB3P2-201ENST00000411913 E2F6O75461 281 aa2.38□□□□□ -2.03
HMGB3P2-201ENST00000411913 GPC4O75487 556 aa2.38□□□□□ -2.03
HMGB3P2-201ENST00000411913 LUC7L3O95232 432 aaKnown RBP2.38□□□□□ -2.03
HMGB3P2-201ENST00000411913 CCDC175P0C221 793 aa2.38□□□□□ -2.03
HMGB3P2-201ENST00000411913 RHOXF2BP0C7M4 288 aa2.38□□□□□ -2.03
HMGB3P2-201ENST00000411913 TOP1P11387 765 aaKnown RBP2.38□□□□□ -2.03
HMGB3P2-201ENST00000411913 PRLRP16471 622 aa2.38□□□□□ -2.03
HMGB3P2-201ENST00000411913 GNAZP19086 355 aa2.38□□□□□ -2.03
HMGB3P2-201ENST00000411913 UBA1P22314 1058 aaKnown RBP2.38□□□□□ -2.03
HMGB3P2-201ENST00000411913 CMA1P23946 247 aa2.38□□□□□ -2.03
HMGB3P2-201ENST00000411913 ALDH3A1P30838 453 aa2.38□□□□□ -2.03
HMGB3P2-201ENST00000411913 PEX19P40855 299 aa2.38□□□□□ -2.03
HMGB3P2-201ENST00000411913 RANBP1P43487 201 aa2.38□□□□□ -2.03
HMGB3P2-201ENST00000411913 STAT2P52630 851 aa2.38□□□□□ -2.03
HMGB3P2-201ENST00000411913 ZNF132P52740 706 aa2.38□□□□□ -2.03
HMGB3P2-201ENST00000411913 UBASH3AP57075 661 aa2.38□□□□□ -2.03
HMGB3P2-201ENST00000411913 ADAMTS12P58397 1594 aa2.38□□□□□ -2.03
HMGB3P2-201ENST00000411913 MYL5Q02045 173 aa2.38□□□□□ -2.03
HMGB3P2-201ENST00000411913 IFT88Q13099 833 aa2.38□□□□□ -2.03
HMGB3P2-201ENST00000411913 TNFAIP1Q13829 316 aa2.38□□□□□ -2.03
HMGB3P2-201ENST00000411913 MTF1Q14872 753 aa2.38□□□□□ -2.03
HMGB3P2-201ENST00000411913 RASA2Q15283 850 aa2.38□□□□□ -2.03
HMGB3P2-201ENST00000411913 CLPPQ16740 277 aaPredicted RBP2.38□□□□□ -2.03
HMGB3P2-201ENST00000411913 MMEL1Q495T6 779 aa2.38□□□□□ -2.03
HMGB3P2-201ENST00000411913 LRRC23Q53EV4 343 aaPredicted RBP2.38□□□□□ -2.03
HMGB3P2-201ENST00000411913 PPP6R3Q5H9R7 873 aaPredicted RBP2.38□□□□□ -2.03
HMGB3P2-201ENST00000411913 KRT79Q5XKE5 535 aa2.38□□□□□ -2.03
HMGB3P2-201ENST00000411913 SPECC1LQ69YQ0 1117 aa2.38□□□□□ -2.03
HMGB3P2-201ENST00000411913 OR52E8Q6IFG1 317 aa2.38□□□□□ -2.03
HMGB3P2-201ENST00000411913 EMBQ6PCB8 327 aa2.38□□□□□ -2.03
HMGB3P2-201ENST00000411913 CCDC73Q6ZRK6 1079 aa2.38□□□□□ -2.03
HMGB3P2-201ENST00000411913 CCDC121Q6ZUS5 278 aa2.38□□□□□ -2.03
HMGB3P2-201ENST00000411913 PIGWQ7Z7B1 504 aa2.38□□□□□ -2.03
HMGB3P2-201ENST00000411913 KBTBD6Q86V97 674 aa2.38□□□□□ -2.03
HMGB3P2-201ENST00000411913 CEP57Q86XR8 500 aa2.38□□□□□ -2.03
HMGB3P2-201ENST00000411913 LRRC43Q8N309 656 aa2.38□□□□□ -2.03
HMGB3P2-201ENST00000411913 SLC35F6Q8N357 371 aa2.38□□□□□ -2.03
HMGB3P2-201ENST00000411913 PGBD5Q8N414 524 aa2.38□□□□□ -2.03
HMGB3P2-201ENST00000411913 FBXL16Q8N461 479 aa2.38□□□□□ -2.03
HMGB3P2-201ENST00000411913 AADATQ8N5Z0 425 aa2.38□□□□□ -2.03
HMGB3P2-201ENST00000411913 NECAB1Q8N987 351 aa2.38□□□□□ -2.03
HMGB3P2-201ENST00000411913 EIF1ADQ8N9N8 165 aaKnown RBP2.38□□□□□ -2.03
HMGB3P2-201ENST00000411913 POMGNT2Q8NAT1 580 aa2.38□□□□□ -2.03
HMGB3P2-201ENST00000411913 MLKLQ8NB16 471 aa2.38□□□□□ -2.03
HMGB3P2-201ENST00000411913 AVL9Q8NBF6 648 aa2.38□□□□□ -2.03
HMGB3P2-201ENST00000411913 LINC00301Q8NCQ3 95 aa2.38□□□□□ -2.03
HMGB3P2-201ENST00000411913 CCDC148Q8NFR7 591 aa2.38□□□□□ -2.03
HMGB3P2-201ENST00000411913 GRAPLQ8TC17 118 aaPredicted RBP2.38□□□□□ -2.03
HMGB3P2-201ENST00000411913 MIPOL1Q8TD10 442 aa2.38□□□□□ -2.03
HMGB3P2-201ENST00000411913 C17orf50Q8WW18 174 aa2.38□□□□□ -2.03
HMGB3P2-201ENST00000411913 MRPS27Q92552 414 aaKnown RBP2.38□□□□□ -2.03
HMGB3P2-201ENST00000411913 CENPTQ96BT3 561 aa2.38□□□□□ -2.03
HMGB3P2-201ENST00000411913 MTBPQ96DY7 904 aa2.38□□□□□ -2.03
HMGB3P2-201ENST00000411913 CCDC51Q96ER9 411 aa2.38□□□□□ -2.03
HMGB3P2-201ENST00000411913 CCDC114Q96M63 670 aa2.38□□□□□ -2.03
HMGB3P2-201ENST00000411913 LRFN5Q96NI6 719 aa2.38□□□□□ -2.03
HMGB3P2-201ENST00000411913 ZNF385AQ96PM9 386 aaKnown RBP2.38□□□□□ -2.03
HMGB3P2-201ENST00000411913 USP28Q96RU2 1077 aa2.38□□□□□ -2.03
HMGB3P2-201ENST00000411913 TSC22D3Q99576 134 aa2.38□□□□□ -2.03
HMGB3P2-201ENST00000411913 NAPGQ99747 312 aaPredicted RBP2.38□□□□□ -2.03
HMGB3P2-201ENST00000411913 RHOXF2Q9BQY4 288 aa2.38□□□□□ -2.03
HMGB3P2-201ENST00000411913 PCGF1Q9BSM1 259 aa2.38□□□□□ -2.03
HMGB3P2-201ENST00000411913 KIFC3Q9BVG8 833 aa2.38□□□□□ -2.03
HMGB3P2-201ENST00000411913 APOL6Q9BWW8 343 aa2.38□□□□□ -2.03
HMGB3P2-201ENST00000411913 YIPF3Q9GZM5 350 aa2.38□□□□□ -2.03
HMGB3P2-201ENST00000411913 KCNN2Q9H2S1 579 aa2.38□□□□□ -2.03
HMGB3P2-201ENST00000411913 HRH4Q9H3N8 390 aa2.38□□□□□ -2.03
HMGB3P2-201ENST00000411913 CLK4Q9HAZ1 481 aaKnown RBP2.38□□□□□ -2.03
HMGB3P2-201ENST00000411913 DMAP1Q9NPF5 467 aaPredicted RBP2.38□□□□□ -2.03
HMGB3P2-201ENST00000411913 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP2.38□□□□□ -2.03
HMGB3P2-201ENST00000411913 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms