RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 OLIG2Q13516 323 aa4.25□□□□□ -1.73
CLK1-203ENST00000409769 DHX34Q14147 1143 aaKnown RBP4.25□□□□□ -1.73
CLK1-203ENST00000409769 MXD4Q14582 209 aaPredicted RBP4.25□□□□□ -1.73
CLK1-203ENST00000409769 CCNG2Q16589 344 aa4.25□□□□□ -1.73
CLK1-203ENST00000409769 KNOP1Q1ED39 458 aaKnown RBP4.25□□□□□ -1.73
CLK1-203ENST00000409769 ZNF718Q3SXZ3 478 aa4.25□□□□□ -1.73
CLK1-203ENST00000409769 ZC2HC1CQ53FD0 456 aaPredicted RBP4.25□□□□□ -1.73
CLK1-203ENST00000409769 C6orf141Q5SZD1 244 aa4.25□□□□□ -1.73
CLK1-203ENST00000409769 SPATA1Q5VX52 437 aa4.25□□□□□ -1.73
CLK1-203ENST00000409769 KLHL10Q6JEL2 608 aa4.25□□□□□ -1.73
CLK1-203ENST00000409769 CDC73Q6P1J9 531 aa4.25□□□□□ -1.73
CLK1-203ENST00000409769 METTL2BQ6P1Q9 378 aaKnown RBP4.25□□□□□ -1.73
CLK1-203ENST00000409769 SLC39A4Q6P5W5 647 aa4.25□□□□□ -1.73
CLK1-203ENST00000409769 APTXQ7Z2E3 356 aaKnown RBP4.25□□□□□ -1.73
CLK1-203ENST00000409769 HAUS6Q7Z4H7 955 aa4.25□□□□□ -1.73
CLK1-203ENST00000409769 RPAINQ86UA6 219 aa4.25□□□□□ -1.73
CLK1-203ENST00000409769 ZNF410Q86VK4 478 aa4.25□□□□□ -1.73
CLK1-203ENST00000409769 C12orf56Q8IXR9 622 aa4.25□□□□□ -1.73
CLK1-203ENST00000409769 ZBTB2Q8N680 514 aa4.25□□□□□ -1.73
CLK1-203ENST00000409769 HUS1BQ8NHY5 278 aa4.25□□□□□ -1.73
CLK1-203ENST00000409769 TMEM255BQ8WV15 326 aa4.25□□□□□ -1.73
CLK1-203ENST00000409769 PRPF31Q8WWY3 499 aaKnown RBP4.25□□□□□ -1.73
CLK1-203ENST00000409769 PSPC1Q8WXF1 523 aaKnown RBP4.25□□□□□ -1.73
CLK1-203ENST00000409769 SCMH1Q96GD3 660 aa4.25□□□□□ -1.73
CLK1-203ENST00000409769 METTL2AQ96IZ6 378 aaKnown RBP4.25□□□□□ -1.73
CLK1-203ENST00000409769 CCDC43Q96MW1 224 aaKnown RBP4.25□□□□□ -1.73
CLK1-203ENST00000409769 C7orf26Q96N11 449 aa4.25□□□□□ -1.73
CLK1-203ENST00000409769 HAUS8Q9BT25 410 aa4.25□□□□□ -1.73
CLK1-203ENST00000409769 KIFC3Q9BVG8 833 aa4.25□□□□□ -1.73
CLK1-203ENST00000409769 NAT10Q9H0A0 1025 aaKnown RBP4.25□□□□□ -1.73
CLK1-203ENST00000409769 ZHX3Q9H4I2 956 aa4.25□□□□□ -1.73
CLK1-203ENST00000409769 GRPEL1Q9HAV7 217 aa4.25□□□□□ -1.73
CLK1-203ENST00000409769 SAMSN1Q9NSI8 373 aaKnown RBP4.25□□□□□ -1.73
CLK1-203ENST00000409769 SMARCAL1Q9NZC9 954 aa4.25□□□□□ -1.73
CLK1-203ENST00000409769 SUCLA2Q9P2R7 463 aaPredicted RBP4.25□□□□□ -1.73
CLK1-203ENST00000409769 INTS6Q9UL03 887 aaKnown RBP4.25□□□□□ -1.73
CLK1-203ENST00000409769 PHLPP2Q6ZVD8 1323 aa4.24□□□□□ -1.73
CLK1-203ENST00000409769 A0A0U1RQG5 324 aaPredicted RBP4.24□□□□□ -1.73
CLK1-203ENST00000409769 A0A1W2PPH5 198 aa4.24□□□□□ -1.73
CLK1-203ENST00000409769 BICDL2A1A5D9 508 aa4.24□□□□□ -1.73
CLK1-203ENST00000409769 MAGEA13PA6NCF6 341 aa4.24□□□□□ -1.73
CLK1-203ENST00000409769 NPIPB15A6NHN6 443 aaPredicted RBP4.24□□□□□ -1.73
CLK1-203ENST00000409769 CCDC169A6NNP5 214 aa4.24□□□□□ -1.73
CLK1-203ENST00000409769 H0YCG3 227 aa4.24□□□□□ -1.73
CLK1-203ENST00000409769 J3KRW8 73 aa4.24□□□□□ -1.73
CLK1-203ENST00000409769 NTN3O00634 580 aaPredicted RBP4.24□□□□□ -1.73
CLK1-203ENST00000409769 PLRG1O43660 514 aaKnown RBP4.24□□□□□ -1.73
CLK1-203ENST00000409769 RFPL2O75678 378 aa4.24□□□□□ -1.73
CLK1-203ENST00000409769 SEC31AO94979 1220 aaKnown RBP4.24□□□□□ -1.73
CLK1-203ENST00000409769 VTNP04004 478 aa4.24□□□□□ -1.73
CLK1-203ENST00000409769 IQCF3P0C7M6 154 aa4.24□□□□□ -1.73
CLK1-203ENST00000409769 ATP1A3P13637 1013 aa4.24□□□□□ -1.73
CLK1-203ENST00000409769 ADSSP30520 456 aa4.24□□□□□ -1.73
CLK1-203ENST00000409769 EEF1A2Q05639 463 aaKnown RBP4.24□□□□□ -1.73
CLK1-203ENST00000409769 MBTD1Q05BQ5 628 aa4.24□□□□□ -1.73
CLK1-203ENST00000409769 MGAT3Q09327 533 aa4.24□□□□□ -1.73
CLK1-203ENST00000409769 GRSF1Q12849 480 aaKnown RBP eCLIP4.24□□□□□ -1.73
CLK1-203ENST00000409769 ITGA7Q13683 1181 aa4.24□□□□□ -1.73
CLK1-203ENST00000409769 FGFBP1Q14512 234 aa4.24□□□□□ -1.73
CLK1-203ENST00000409769 C2orf68Q2NKX9 166 aa4.24□□□□□ -1.73
CLK1-203ENST00000409769 ATP13A5Q4VNC0 1218 aa4.24□□□□□ -1.73
CLK1-203ENST00000409769 SARM1Q6SZW1 724 aa4.24□□□□□ -1.73
CLK1-203ENST00000409769 LCTLQ6UWM7 567 aa4.24□□□□□ -1.73
CLK1-203ENST00000409769 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.24□□□□□ -1.73
CLK1-203ENST00000409769 STXBP4Q6ZWJ1 553 aa4.24□□□□□ -1.73
CLK1-203ENST00000409769 R3HCC1LQ7Z5L2 792 aaKnown RBP4.24□□□□□ -1.73
CLK1-203ENST00000409769 SERINC5Q86VE9 423 aa4.24□□□□□ -1.73
CLK1-203ENST00000409769 TDRPQ86YL5 185 aa4.24□□□□□ -1.73
CLK1-203ENST00000409769 CHERPQ8IWX8 916 aaKnown RBP4.24□□□□□ -1.73
CLK1-203ENST00000409769 NELFCDQ8IXH7 590 aa4.24□□□□□ -1.73
CLK1-203ENST00000409769 METTL13Q8N6R0 699 aa4.24□□□□□ -1.73
CLK1-203ENST00000409769 RNF149Q8NC42 400 aa4.24□□□□□ -1.73
CLK1-203ENST00000409769 LILRB1Q8NHL6 650 aaPredicted RBP4.24□□□□□ -1.73
CLK1-203ENST00000409769 U2AF1L4Q8WU68 220 aaKnown RBP4.24□□□□□ -1.73
CLK1-203ENST00000409769 PABPC5Q96DU9 382 aaKnown RBP4.24□□□□□ -1.73
CLK1-203ENST00000409769 BICD1Q96G01 975 aa4.24□□□□□ -1.73
CLK1-203ENST00000409769 IFT74Q96LB3 600 aa4.24□□□□□ -1.73
CLK1-203ENST00000409769 GLT1D1Q96MS3 346 aa4.24□□□□□ -1.73
CLK1-203ENST00000409769 DEFB118Q96PH6 123 aa4.24□□□□□ -1.73
CLK1-203ENST00000409769 SPRY4Q9C004 299 aa4.24□□□□□ -1.73
CLK1-203ENST00000409769 TKTL2Q9H0I9 626 aa4.24□□□□□ -1.73
CLK1-203ENST00000409769 C2orf40Q9H1Z8 148 aa4.24□□□□□ -1.73
CLK1-203ENST00000409769 KCNN2Q9H2S1 579 aa4.24□□□□□ -1.73
CLK1-203ENST00000409769 FZD8Q9H461 694 aa4.24□□□□□ -1.73
CLK1-203ENST00000409769 THAP9Q9H5L6 903 aa4.24□□□□□ -1.73
CLK1-203ENST00000409769 TMEM206Q9H813 350 aa4.24□□□□□ -1.73
CLK1-203ENST00000409769 MINDY3Q9H8M7 445 aa4.24□□□□□ -1.73
CLK1-203ENST00000409769 AGPAT3Q9NRZ7 376 aa4.24□□□□□ -1.73
CLK1-203ENST00000409769 DMAC2Q9NW81 257 aa4.24□□□□□ -1.73
CLK1-203ENST00000409769 OCIAD1Q9NX40 245 aa4.24□□□□□ -1.73
CLK1-203ENST00000409769 ABI3Q9P2A4 366 aa4.24□□□□□ -1.73
CLK1-203ENST00000409769 CGNQ9P2M7 1197 aaKnown RBP4.24□□□□□ -1.73
CLK1-203ENST00000409769 HAO1Q9UJM8 370 aa4.24□□□□□ -1.73
CLK1-203ENST00000409769 STYXL1Q9Y6J8 313 aa4.24□□□□□ -1.73
CLK1-203ENST00000409769 MICAL3Q7RTP6 2002 aa4.24□□□□□ -1.73
CLK1-203ENST00000409769 LRRIQ4A6NIV6 560 aa4.23□□□□□ -1.73
CLK1-203ENST00000409769 B4E171 279 aa4.23□□□□□ -1.73
CLK1-203ENST00000409769 ANKRD63C9JTQ0 380 aa4.23□□□□□ -1.73
CLK1-203ENST00000409769 GOLGA6L19H0YKK7 550 aa4.23□□□□□ -1.73
CLK1-203ENST00000409769 IFNL4K9M1U5 179 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms