RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 MYLK4Q86YV6 388 aaPredicted RBP13.66□□□□□ -0.22
GPNMB-203ENST00000409458 UBALD2Q8IYN6 164 aa13.66□□□□□ -0.22
GPNMB-203ENST00000409458 LMNTD1Q8N9Z9 388 aa13.66□□□□□ -0.22
GPNMB-203ENST00000409458 FBXO27Q8NI29 283 aa13.66□□□□□ -0.22
GPNMB-203ENST00000409458 HMGCLL1Q8TB92 370 aa13.66□□□□□ -0.22
GPNMB-203ENST00000409458 TFGQ92734 400 aaPredicted RBP13.66□□□□□ -0.22
GPNMB-203ENST00000409458 MIPEPQ99797 713 aa13.66□□□□□ -0.22
GPNMB-203ENST00000409458 SLC29A3Q9BZD2 475 aa13.66□□□□□ -0.22
GPNMB-203ENST00000409458 CHRDQ9H2X0 955 aa13.66□□□□□ -0.22
GPNMB-203ENST00000409458 KLQ9UEF7 1012 aa13.66□□□□□ -0.22
GPNMB-203ENST00000409458 ACSL5Q9ULC5 683 aa13.66□□□□□ -0.22
GPNMB-203ENST00000409458 E7EQ34 232 aa13.65□□□□□ -0.22
GPNMB-203ENST00000409458 SLC22A2O15244 555 aa13.65□□□□□ -0.22
GPNMB-203ENST00000409458 VPS4BO75351 444 aa13.65□□□□□ -0.22
GPNMB-203ENST00000409458 ZNF217O75362 1048 aa13.65□□□□□ -0.22
GPNMB-203ENST00000409458 APBB3O95704 486 aa13.65□□□□□ -0.22
GPNMB-203ENST00000409458 NQO1P15559 274 aaKnown RBP13.65□□□□□ -0.22
GPNMB-203ENST00000409458 LBPP18428 481 aa13.65□□□□□ -0.22
GPNMB-203ENST00000409458 KELP23276 732 aa13.65□□□□□ -0.22
GPNMB-203ENST00000409458 PRDX6P30041 224 aa13.65□□□□□ -0.22
GPNMB-203ENST00000409458 RASSF2P50749 326 aa13.65□□□□□ -0.22
GPNMB-203ENST00000409458 FASTKQ14296 549 aaKnown RBP13.65□□□□□ -0.22
GPNMB-203ENST00000409458 LRRC56Q8IYG6 542 aaPredicted RBP13.65□□□□□ -0.22
GPNMB-203ENST00000409458 SYTL1Q8IYJ3 562 aa13.65□□□□□ -0.22
GPNMB-203ENST00000409458 CHCHD4Q8N4Q1 142 aa13.65□□□□□ -0.22
GPNMB-203ENST00000409458 OR5K2Q8NHB8 316 aa13.65□□□□□ -0.22
GPNMB-203ENST00000409458 CLDN23Q96B33 292 aa13.65□□□□□ -0.22
GPNMB-203ENST00000409458 IL17FQ96PD4 163 aa13.65□□□□□ -0.22
GPNMB-203ENST00000409458 FARSBQ9NSD9 589 aaKnown RBP13.65□□□□□ -0.22
GPNMB-203ENST00000409458 MUTYHQ9UIF7 546 aa13.65□□□□□ -0.22
GPNMB-203ENST00000409458 TDRKHQ9Y2W6 561 aaKnown RBP13.65□□□□□ -0.22
GPNMB-203ENST00000409458 HS3ST3A1Q9Y663 406 aa13.65□□□□□ -0.22
GPNMB-203ENST00000409458 CFAP73A6NFT4 308 aa13.64□□□□□ -0.23
GPNMB-203ENST00000409458 PRAMEF26H0Y7S4 382 aa13.64□□□□□ -0.23
GPNMB-203ENST00000409458 MANBAO00462 879 aa13.64□□□□□ -0.23
GPNMB-203ENST00000409458 STK25O00506 426 aa13.64□□□□□ -0.23
GPNMB-203ENST00000409458 PEX11AO75192 247 aa13.64□□□□□ -0.23
GPNMB-203ENST00000409458 COX4I1P13073 169 aa13.64□□□□□ -0.23
GPNMB-203ENST00000409458 HTR1BP28222 390 aa13.64□□□□□ -0.23
GPNMB-203ENST00000409458 ADSLP30566 484 aaPredicted RBP13.64□□□□□ -0.23
GPNMB-203ENST00000409458 HALP42357 657 aa13.64□□□□□ -0.23
GPNMB-203ENST00000409458 PNLIPRP1P54315 467 aa13.64□□□□□ -0.23
GPNMB-203ENST00000409458 YPEL5P62699 121 aa13.64□□□□□ -0.23
GPNMB-203ENST00000409458 MTAPQ13126 283 aa13.64□□□□□ -0.23
GPNMB-203ENST00000409458 TCEA2Q15560 299 aa13.64□□□□□ -0.23
GPNMB-203ENST00000409458 CPSF6Q16630 551 aaKnown RBP eCLIP13.64□□□□□ -0.23
GPNMB-203ENST00000409458 OGFOD2Q6N063 350 aa13.64□□□□□ -0.23
GPNMB-203ENST00000409458 RNF165Q6ZSG1 346 aa13.64□□□□□ -0.23
GPNMB-203ENST00000409458 Q6ZSR6 202 aa13.64□□□□□ -0.23
GPNMB-203ENST00000409458 Q6ZSR9 355 aa13.64□□□□□ -0.23
GPNMB-203ENST00000409458 ABI3BPQ7Z7G0 1075 aa13.64□□□□□ -0.23
GPNMB-203ENST00000409458 SLC22A18ASQ8N1D0 253 aa13.64□□□□□ -0.23
GPNMB-203ENST00000409458 SFRP1Q8N474 314 aa13.64□□□□□ -0.23
GPNMB-203ENST00000409458 SPEM1Q8N4L4 309 aa13.64□□□□□ -0.23
GPNMB-203ENST00000409458 L3MBTL4Q8NA19 623 aa13.64□□□□□ -0.23
GPNMB-203ENST00000409458 OR13H1Q8NG92 308 aa13.64□□□□□ -0.23
GPNMB-203ENST00000409458 MAGEC3Q8TD91 643 aa13.64□□□□□ -0.23
GPNMB-203ENST00000409458 USP7Q93009 1102 aa13.64□□□□□ -0.23
GPNMB-203ENST00000409458 TSACCQ96A04 125 aaPredicted RBP13.64□□□□□ -0.23
GPNMB-203ENST00000409458 RAD51AP1Q96B01 352 aa13.64□□□□□ -0.23
GPNMB-203ENST00000409458 CMTM5Q96DZ9 223 aa13.64□□□□□ -0.23
GPNMB-203ENST00000409458 C12orf66Q96MD2 445 aa13.64□□□□□ -0.23
GPNMB-203ENST00000409458 INSM2Q96T92 566 aaPredicted RBP13.64□□□□□ -0.23
GPNMB-203ENST00000409458 NRTNQ99748 197 aa13.64□□□□□ -0.23
GPNMB-203ENST00000409458 CCT7Q99832 543 aa13.64□□□□□ -0.23
GPNMB-203ENST00000409458 RIC8BQ9NVN3 520 aa13.64□□□□□ -0.23
GPNMB-203ENST00000409458 SLCO1B1Q9Y6L6 691 aa13.64□□□□□ -0.23
GPNMB-203ENST00000409458 LOC100653049A0A140TA62 436 aa13.63□□□□□ -0.23
GPNMB-203ENST00000409458 B2RBV5 119 aa13.63□□□□□ -0.23
GPNMB-203ENST00000409458 E7ENX8 843 aa13.63□□□□□ -0.23
GPNMB-203ENST00000409458 KCNJ13O60928 360 aa13.63□□□□□ -0.23
GPNMB-203ENST00000409458 KRT34O76011 436 aa13.63□□□□□ -0.23
GPNMB-203ENST00000409458 RPN2P04844 631 aa13.63□□□□□ -0.23
GPNMB-203ENST00000409458 KRT16P08779 473 aa13.63□□□□□ -0.23
GPNMB-203ENST00000409458 CD22P20273 847 aa13.63□□□□□ -0.23
GPNMB-203ENST00000409458 IDSP22304 550 aa13.63□□□□□ -0.23
GPNMB-203ENST00000409458 ATP4BP51164 291 aa13.63□□□□□ -0.23
GPNMB-203ENST00000409458 THOP1P52888 689 aa13.63□□□□□ -0.23
GPNMB-203ENST00000409458 TAP2Q03519 686 aa13.63□□□□□ -0.23
GPNMB-203ENST00000409458 CHIT1Q13231 466 aa13.63□□□□□ -0.23
GPNMB-203ENST00000409458 PRKG2Q13237 762 aa13.63□□□□□ -0.23
GPNMB-203ENST00000409458 PTK2BQ14289 1009 aa13.63□□□□□ -0.23
GPNMB-203ENST00000409458 CLCA4Q14CN2 919 aa13.63□□□□□ -0.23
GPNMB-203ENST00000409458 SGO1Q5FBB7 561 aa13.63□□□□□ -0.23
GPNMB-203ENST00000409458 CAPN13Q6MZZ7 669 aaPredicted RBP13.63□□□□□ -0.23
GPNMB-203ENST00000409458 RD3Q7Z3Z2 195 aa13.63□□□□□ -0.23
GPNMB-203ENST00000409458 SNX32Q86XE0 403 aa13.63□□□□□ -0.23
GPNMB-203ENST00000409458 TBC1D21Q8IYX1 336 aa13.63□□□□□ -0.23
GPNMB-203ENST00000409458 RBM15BQ8NDT2 890 aaKnown RBP13.63□□□□□ -0.23
GPNMB-203ENST00000409458 SNX19Q92543 992 aa13.63□□□□□ -0.23
GPNMB-203ENST00000409458 UTP4Q969X6 686 aaKnown RBP13.63□□□□□ -0.23
GPNMB-203ENST00000409458 ORAI3Q9BRQ5 295 aa13.63□□□□□ -0.23
GPNMB-203ENST00000409458 BTBD10Q9BSF8 475 aa13.63□□□□□ -0.23
GPNMB-203ENST00000409458 SGPP1Q9BX95 441 aa13.63□□□□□ -0.23
GPNMB-203ENST00000409458 TBC1D10AQ9BXI6 508 aa13.63□□□□□ -0.23
GPNMB-203ENST00000409458 TRIT1Q9H3H1 467 aaKnown RBP13.63□□□□□ -0.23
GPNMB-203ENST00000409458 CAAP1Q9H8G2 361 aa13.63□□□□□ -0.23
GPNMB-203ENST00000409458 PFDN4Q9NQP4 134 aa13.63□□□□□ -0.23
GPNMB-203ENST00000409458 PRDM8Q9NQV8 689 aa13.63□□□□□ -0.23
GPNMB-203ENST00000409458 TAS2R1Q9NYW7 299 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms