RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 MED26O95402 600 aa15.11■□□□□ 0.01
LIMS2-205ENST00000409455 MRPS15P82914 257 aaKnown RBP15.11■□□□□ 0.01
LIMS2-205ENST00000409455 PON2Q15165 354 aa15.11■□□□□ 0.01
LIMS2-205ENST00000409455 NR6A1Q15406 480 aa15.11■□□□□ 0.01
LIMS2-205ENST00000409455 FAM171A1Q5VUB5 890 aa15.11■□□□□ 0.01
LIMS2-205ENST00000409455 TTC23LQ6PF05 361 aa15.11■□□□□ 0.01
LIMS2-205ENST00000409455 SHQ1Q6PI26 577 aaKnown RBP15.11■□□□□ 0.01
LIMS2-205ENST00000409455 PARP16Q8N5Y8 322 aa15.11■□□□□ 0.01
LIMS2-205ENST00000409455 RTL3Q8N8U3 475 aaKnown RBP15.11■□□□□ 0.01
LIMS2-205ENST00000409455 SLC38A4Q969I6 547 aa15.11■□□□□ 0.01
LIMS2-205ENST00000409455 TOX2Q96NM4 488 aa15.11■□□□□ 0.01
LIMS2-205ENST00000409455 ZBTB18Q99592 522 aa15.11■□□□□ 0.01
LIMS2-205ENST00000409455 PKP3Q9Y446 797 aa15.11■□□□□ 0.01
LIMS2-205ENST00000409455 POLR3HQ9Y535 204 aaPredicted RBP15.11■□□□□ 0.01
LIMS2-205ENST00000409455 TTC3P53804 2025 aa15.1■□□□□ 0.01
LIMS2-205ENST00000409455 NYNRINQ9P2P1 1898 aaKnown RBP15.1■□□□□ 0.01
LIMS2-205ENST00000409455 NPEPPSL1A6NEC2 478 aa15.1■□□□□ 0.01
LIMS2-205ENST00000409455 CDC7O00311 574 aa15.1■□□□□ 0.01
LIMS2-205ENST00000409455 BTN3A1O00481 513 aa15.1■□□□□ 0.01
LIMS2-205ENST00000409455 LCKP06239 509 aa15.1■□□□□ 0.01
LIMS2-205ENST00000409455 AKT1P31749 480 aa15.1■□□□□ 0.01
LIMS2-205ENST00000409455 SLC11A1P49279 550 aa15.1■□□□□ 0.01
LIMS2-205ENST00000409455 ARHGDIAP52565 204 aa15.1■□□□□ 0.01
LIMS2-205ENST00000409455 STC1P52823 247 aa15.1■□□□□ 0.01
LIMS2-205ENST00000409455 DSC2Q02487 901 aa15.1■□□□□ 0.01
LIMS2-205ENST00000409455 PRKCDQ05655 676 aa15.1■□□□□ 0.01
LIMS2-205ENST00000409455 SEMA3AQ14563 771 aa15.1■□□□□ 0.01
LIMS2-205ENST00000409455 BRMS1LQ5PSV4 323 aa15.1■□□□□ 0.01
LIMS2-205ENST00000409455 MANEALQ5VSG8 457 aa15.1■□□□□ 0.01
LIMS2-205ENST00000409455 ZNF544Q6NX49 715 aa15.1■□□□□ 0.01
LIMS2-205ENST00000409455 UTS2BQ765I0 119 aa15.1■□□□□ 0.01
LIMS2-205ENST00000409455 GPR149Q86SP6 731 aa15.1■□□□□ 0.01
LIMS2-205ENST00000409455 SLC22A15Q8IZD6 547 aa15.1■□□□□ 0.01
LIMS2-205ENST00000409455 IPCEF1Q8WWN9 437 aaPredicted RBP15.1■□□□□ 0.01
LIMS2-205ENST00000409455 SNX18Q96RF0 628 aa15.1■□□□□ 0.01
LIMS2-205ENST00000409455 CDK5RAP1Q96SZ6 601 aaKnown RBP15.1■□□□□ 0.01
LIMS2-205ENST00000409455 UXTQ9UBK9 157 aaPredicted RBP15.1■□□□□ 0.01
LIMS2-205ENST00000409455 N6AMT1Q9Y5N5 214 aa15.1■□□□□ 0.01
LIMS2-205ENST00000409455 SCN5AQ14524 2016 aa15.1■□□□□ 0.01
LIMS2-205ENST00000409455 RECQL5O94762 991 aaPredicted RBP15.1■□□□□ 0.01
LIMS2-205ENST00000409455 SERPINA1P01009 418 aa15.1■□□□□ 0.01
LIMS2-205ENST00000409455 OGNP20774 298 aaKnown RBP15.1■□□□□ 0.01
LIMS2-205ENST00000409455 PPP3CCP48454 512 aa15.1■□□□□ 0.01
LIMS2-205ENST00000409455 SMN1Q16637 294 aaKnown RBP15.1■□□□□ 0.01
LIMS2-205ENST00000409455 MARC1Q5VT66 337 aa15.1■□□□□ 0.01
LIMS2-205ENST00000409455 AFMIDQ63HM1 303 aa15.1■□□□□ 0.01
LIMS2-205ENST00000409455 PPP2R2DQ66LE6 453 aa15.1■□□□□ 0.01
LIMS2-205ENST00000409455 IL27RAQ6UWB1 636 aa15.1■□□□□ 0.01
LIMS2-205ENST00000409455 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.1■□□□□ 0.01
LIMS2-205ENST00000409455 PRR23CQ6ZRP0 262 aa15.1■□□□□ 0.01
LIMS2-205ENST00000409455 NPAS4Q8IUM7 802 aa15.1■□□□□ 0.01
LIMS2-205ENST00000409455 BLOC1S5Q8TDH9 187 aa15.1■□□□□ 0.01
LIMS2-205ENST00000409455 FCGR1BQ92637 280 aa15.1■□□□□ 0.01
LIMS2-205ENST00000409455 ZNF382Q96SR6 550 aa15.1■□□□□ 0.01
LIMS2-205ENST00000409455 MARCH5Q9NX47 278 aa15.1■□□□□ 0.01
LIMS2-205ENST00000409455 ABI2Q9NYB9 513 aaPredicted RBP15.1■□□□□ 0.01
LIMS2-205ENST00000409455 MPP6Q9NZW5 540 aa15.1■□□□□ 0.01
LIMS2-205ENST00000409455 EIF2B4Q9UI10 523 aaKnown RBP15.1■□□□□ 0.01
LIMS2-205ENST00000409455 IKZF3Q9UKT9 509 aa15.1■□□□□ 0.01
LIMS2-205ENST00000409455 ARL5AQ9Y689 179 aa15.1■□□□□ 0.01
LIMS2-205ENST00000409455 EVPLLA8MZ36 301 aa15.09■□□□□ 0.01
LIMS2-205ENST00000409455 IRAK2O43187 625 aa15.09■□□□□ 0.01
LIMS2-205ENST00000409455 CREG1O75629 220 aa15.09■□□□□ 0.01
LIMS2-205ENST00000409455 RPP40O75818 363 aaKnown RBP15.09■□□□□ 0.01
LIMS2-205ENST00000409455 PGLSO95336 258 aa15.09■□□□□ 0.01
LIMS2-205ENST00000409455 DBTP11182 482 aaKnown RBP15.09■□□□□ 0.01
LIMS2-205ENST00000409455 CHRNB1P11230 501 aa15.09■□□□□ 0.01
LIMS2-205ENST00000409455 NRIP1P48552 1158 aa15.09■□□□□ 0.01
LIMS2-205ENST00000409455 CLK3P49761 638 aaKnown RBP15.09■□□□□ 0.01
LIMS2-205ENST00000409455 MAPKAPK3Q16644 382 aa15.09■□□□□ 0.01
LIMS2-205ENST00000409455 SYT16Q17RD7 645 aa15.09■□□□□ 0.01
LIMS2-205ENST00000409455 CPZQ66K79 652 aa15.09■□□□□ 0.01
LIMS2-205ENST00000409455 LAIR1Q6GTX8 287 aa15.09■□□□□ 0.01
LIMS2-205ENST00000409455 AHSA2Q719I0 299 aa15.09■□□□□ 0.01
LIMS2-205ENST00000409455 GDPD3Q7L5L3 318 aa15.09■□□□□ 0.01
LIMS2-205ENST00000409455 CYP4Z1Q86W10 505 aa15.09■□□□□ 0.01
LIMS2-205ENST00000409455 TMEM173Q86WV6 379 aaPredicted RBP15.09■□□□□ 0.01
LIMS2-205ENST00000409455 IL17RDQ8NFM7 739 aa15.09■□□□□ 0.01
LIMS2-205ENST00000409455 OR6F1Q8NGZ6 308 aa15.09■□□□□ 0.01
LIMS2-205ENST00000409455 NUDT8Q8WV74 236 aa15.09■□□□□ 0.01
LIMS2-205ENST00000409455 POP5Q969H6 163 aaKnown RBP15.09■□□□□ 0.01
LIMS2-205ENST00000409455 PYCR2Q96C36 320 aa15.09■□□□□ 0.01
LIMS2-205ENST00000409455 CDK15Q96Q40 435 aa15.09■□□□□ 0.01
LIMS2-205ENST00000409455 TRIM62Q9BVG3 475 aa15.09■□□□□ 0.01
LIMS2-205ENST00000409455 IKZF5Q9H5V7 419 aa15.09■□□□□ 0.01
LIMS2-205ENST00000409455 SYN3O14994 580 aa15.09■□□□□ 0.01
LIMS2-205ENST00000409455 ANKRD28O15084 1053 aa15.09■□□□□ 0.01
LIMS2-205ENST00000409455 GALTP07902 379 aa15.09■□□□□ 0.01
LIMS2-205ENST00000409455 MMP2P08253 660 aa15.09■□□□□ 0.01
LIMS2-205ENST00000409455 KRT20P35900 424 aa15.09■□□□□ 0.01
LIMS2-205ENST00000409455 ACVR1Q04771 509 aa15.09■□□□□ 0.01
LIMS2-205ENST00000409455 E2F2Q14209 437 aa15.09■□□□□ 0.01
LIMS2-205ENST00000409455 GBX1Q14549 363 aa15.09■□□□□ 0.01
LIMS2-205ENST00000409455 ATAD3CQ5T2N8 411 aa15.09■□□□□ 0.01
LIMS2-205ENST00000409455 SCN4BQ8IWT1 228 aa15.09■□□□□ 0.01
LIMS2-205ENST00000409455 CELF2-AS1Q8N7Q2 184 aa15.09■□□□□ 0.01
LIMS2-205ENST00000409455 OR4L1Q8NH43 312 aa15.09■□□□□ 0.01
LIMS2-205ENST00000409455 METTL6Q8TCB7 284 aa15.09■□□□□ 0.01
LIMS2-205ENST00000409455 PEX13Q92968 403 aa15.09■□□□□ 0.01
LIMS2-205ENST00000409455 ESAMQ96AP7 390 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms