RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 TEKT5Q96M29 485 aa12.31□□□□□ -0.44
CHRNA1-203ENST00000409219 TMEM121Q9BTD3 319 aa12.31□□□□□ -0.44
CHRNA1-203ENST00000409219 CRB3Q9BUF7 120 aa12.31□□□□□ -0.44
CHRNA1-203ENST00000409219 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.31□□□□□ -0.44
CHRNA1-203ENST00000409219 ASB8Q9H765 288 aa12.31□□□□□ -0.44
CHRNA1-203ENST00000409219 FAM153AQ9UHL3 310 aa12.31□□□□□ -0.44
CHRNA1-203ENST00000409219 ARL5AQ9Y689 179 aa12.31□□□□□ -0.44
CHRNA1-203ENST00000409219 FAM221AA4D161 298 aa12.3□□□□□ -0.44
CHRNA1-203ENST00000409219 MAP2K7O14733 419 aa12.3□□□□□ -0.44
CHRNA1-203ENST00000409219 STX7O15400 261 aaKnown RBP12.3□□□□□ -0.44
CHRNA1-203ENST00000409219 CBFA2T2O43439 604 aa12.3□□□□□ -0.44
CHRNA1-203ENST00000409219 FAM155BO75949 473 aa12.3□□□□□ -0.44
CHRNA1-203ENST00000409219 SRP72O76094 671 aaKnown RBP12.3□□□□□ -0.44
CHRNA1-203ENST00000409219 CYP1A2P05177 515 aa12.3□□□□□ -0.44
CHRNA1-203ENST00000409219 PIM1P11309 404 aaPredicted RBP12.3□□□□□ -0.44
CHRNA1-203ENST00000409219 DRD2P14416 443 aa12.3□□□□□ -0.44
CHRNA1-203ENST00000409219 NFKB1P19838 968 aa12.3□□□□□ -0.44
CHRNA1-203ENST00000409219 MCM3P25205 808 aa12.3□□□□□ -0.44
CHRNA1-203ENST00000409219 PTPN3P26045 913 aa12.3□□□□□ -0.44
CHRNA1-203ENST00000409219 SHMT2P34897 504 aa12.3□□□□□ -0.44
CHRNA1-203ENST00000409219 PDK1Q15118 436 aa12.3□□□□□ -0.44
CHRNA1-203ENST00000409219 SLC1A5Q15758 541 aa12.3□□□□□ -0.44
CHRNA1-203ENST00000409219 SLC9A4Q6AI14 798 aa12.3□□□□□ -0.44
CHRNA1-203ENST00000409219 DTWD1Q8N5C7 304 aa12.3□□□□□ -0.44
CHRNA1-203ENST00000409219 METTL27Q8N6F8 245 aaPredicted RBP12.3□□□□□ -0.44
CHRNA1-203ENST00000409219 OR5AR1Q8NGP9 310 aa12.3□□□□□ -0.44
CHRNA1-203ENST00000409219 CCDC110Q8TBZ0 833 aa12.3□□□□□ -0.44
CHRNA1-203ENST00000409219 TFGQ92734 400 aaPredicted RBP12.3□□□□□ -0.44
CHRNA1-203ENST00000409219 CUTCQ9NTM9 273 aa12.3□□□□□ -0.44
CHRNA1-203ENST00000409219 FKBPLQ9UIM3 349 aa12.3□□□□□ -0.44
CHRNA1-203ENST00000409219 MEMO1Q9Y316 297 aa12.3□□□□□ -0.44
CHRNA1-203ENST00000409219 AGAP14A8MT82 685 aa12.29□□□□□ -0.44
CHRNA1-203ENST00000409219 PPP1R12AO14974 1030 aaPredicted RBP12.29□□□□□ -0.44
CHRNA1-203ENST00000409219 WDPCPO95876 746 aa12.29□□□□□ -0.44
CHRNA1-203ENST00000409219 EPOP01588 193 aa12.29□□□□□ -0.44
CHRNA1-203ENST00000409219 TPBGLP0DKB5 382 aa12.29□□□□□ -0.44
CHRNA1-203ENST00000409219 COX6A1P12074 109 aa12.29□□□□□ -0.44
CHRNA1-203ENST00000409219 MAGP20916 626 aa12.29□□□□□ -0.44
CHRNA1-203ENST00000409219 KDELR1P24390 212 aa12.29□□□□□ -0.44
CHRNA1-203ENST00000409219 XIAPP98170 497 aa12.29□□□□□ -0.44
CHRNA1-203ENST00000409219 KLC1Q07866 573 aa12.29□□□□□ -0.44
CHRNA1-203ENST00000409219 Q6ZPB1 254 aaPredicted RBP12.29□□□□□ -0.44
CHRNA1-203ENST00000409219 DCUN1D1Q96GG9 259 aa12.29□□□□□ -0.44
CHRNA1-203ENST00000409219 OXNAD1Q96HP4 312 aaPredicted RBP12.29□□□□□ -0.44
CHRNA1-203ENST00000409219 MAGED4Q96JG8 741 aa12.29□□□□□ -0.44
CHRNA1-203ENST00000409219 GPAMQ9HCL2 828 aa12.29□□□□□ -0.44
CHRNA1-203ENST00000409219 IFNKQ9P0W0 207 aa12.29□□□□□ -0.44
CHRNA1-203ENST00000409219 CRLS1Q9UJA2 301 aa12.29□□□□□ -0.44
CHRNA1-203ENST00000409219 PYCARDQ9ULZ3 195 aa12.29□□□□□ -0.44
CHRNA1-203ENST00000409219 KLHL20Q9Y2M5 609 aa12.29□□□□□ -0.44
CHRNA1-203ENST00000409219 ZNF835Q9Y2P0 537 aa12.29□□□□□ -0.44
CHRNA1-203ENST00000409219 MRPS2Q9Y399 296 aaKnown RBP12.29□□□□□ -0.44
CHRNA1-203ENST00000409219 PCDHGB6Q9Y5F9 930 aa12.29□□□□□ -0.44
CHRNA1-203ENST00000409219 NSG1A0A0A6YYJ2 146 aa12.28□□□□□ -0.44
CHRNA1-203ENST00000409219 PROSCO94903 275 aa12.28□□□□□ -0.44
CHRNA1-203ENST00000409219 CELA2AP08217 269 aa12.28□□□□□ -0.44
CHRNA1-203ENST00000409219 RALBP11234 206 aa12.28□□□□□ -0.44
CHRNA1-203ENST00000409219 ATP1B2P14415 290 aaPredicted RBP12.28□□□□□ -0.44
CHRNA1-203ENST00000409219 FDXRP22570 491 aa12.28□□□□□ -0.44
CHRNA1-203ENST00000409219 NSG1P42857 185 aa12.28□□□□□ -0.44
CHRNA1-203ENST00000409219 OR1D4P47884 311 aa12.28□□□□□ -0.44
CHRNA1-203ENST00000409219 CACNG1Q06432 222 aa12.28□□□□□ -0.44
CHRNA1-203ENST00000409219 ATG9BQ674R7 924 aa12.28□□□□□ -0.44
CHRNA1-203ENST00000409219 HIBCHQ6NVY1 386 aaPredicted RBP12.28□□□□□ -0.44
CHRNA1-203ENST00000409219 NLRP9Q7RTR0 991 aa12.28□□□□□ -0.44
CHRNA1-203ENST00000409219 TGIF2LYQ8IUE0 185 aa12.28□□□□□ -0.44
CHRNA1-203ENST00000409219 LRRC8AQ8IWT6 810 aa12.28□□□□□ -0.44
CHRNA1-203ENST00000409219 IPMKQ8NFU5 416 aa12.28□□□□□ -0.44
CHRNA1-203ENST00000409219 OR4K2Q8NGD2 314 aa12.28□□□□□ -0.44
CHRNA1-203ENST00000409219 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.28□□□□□ -0.44
CHRNA1-203ENST00000409219 DENND1AQ8TEH3 1009 aa12.28□□□□□ -0.44
CHRNA1-203ENST00000409219 RNF32Q9H0A6 362 aa12.28□□□□□ -0.44
CHRNA1-203ENST00000409219 OR6C2Q9NZP2 312 aa12.28□□□□□ -0.44
CHRNA1-203ENST00000409219 TNFRSF10DQ9UBN6 386 aa12.28□□□□□ -0.44
CHRNA1-203ENST00000409219 PLAGL1Q9UM63 463 aa12.28□□□□□ -0.44
CHRNA1-203ENST00000409219 MAU2Q9Y6X3 613 aa12.28□□□□□ -0.44
CHRNA1-203ENST00000409219 GTF3C1Q12789 2109 aa12.28□□□□□ -0.44
CHRNA1-203ENST00000409219 ABCA4P78363 2273 aa12.28□□□□□ -0.44
CHRNA1-203ENST00000409219 INTS1Q8N201 2190 aaKnown RBP12.28□□□□□ -0.44
CHRNA1-203ENST00000409219 LRRD1A4D1F6 860 aa12.27□□□□□ -0.44
CHRNA1-203ENST00000409219 OR5H15A6NDH6 313 aa12.27□□□□□ -0.44
CHRNA1-203ENST00000409219 ISM1B1AKI9 464 aa12.27□□□□□ -0.44
CHRNA1-203ENST00000409219 APOL1O14791 398 aa12.27□□□□□ -0.44
CHRNA1-203ENST00000409219 PRAMEF2O60811 474 aa12.27□□□□□ -0.44
CHRNA1-203ENST00000409219 UQCRHP07919 91 aa12.27□□□□□ -0.44
CHRNA1-203ENST00000409219 DNAJA1P31689 397 aaKnown RBP12.27□□□□□ -0.44
CHRNA1-203ENST00000409219 TNNT3P45378 269 aaPredicted RBP12.27□□□□□ -0.44
CHRNA1-203ENST00000409219 CARSP49589 748 aaKnown RBP12.27□□□□□ -0.44
CHRNA1-203ENST00000409219 RPA4Q13156 261 aa12.27□□□□□ -0.44
CHRNA1-203ENST00000409219 LONRF1Q17RB8 773 aa12.27□□□□□ -0.44
CHRNA1-203ENST00000409219 SPPL2CQ8IUH8 684 aa12.27□□□□□ -0.44
CHRNA1-203ENST00000409219 MCATQ8IVS2 390 aaKnown RBP12.27□□□□□ -0.44
CHRNA1-203ENST00000409219 PRSS58Q8IYP2 241 aa12.27□□□□□ -0.44
CHRNA1-203ENST00000409219 STT3BQ8TCJ2 826 aa12.27□□□□□ -0.44
CHRNA1-203ENST00000409219 NRGNQ92686 78 aa12.27□□□□□ -0.44
CHRNA1-203ENST00000409219 CXXC4Q9H2H0 198 aa12.27□□□□□ -0.44
CHRNA1-203ENST00000409219 GSX1Q9H4S2 264 aaPredicted RBP12.27□□□□□ -0.44
CHRNA1-203ENST00000409219 C3orf18Q9UK00 162 aa12.27□□□□□ -0.44
CHRNA1-203ENST00000409219 MAP1AP78559 2803 aaPredicted RBP12.27□□□□□ -0.44
CHRNA1-203ENST00000409219 HCFC1P51610 2035 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms