RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 SUSD1Q6UWL2 747 aa8.14□□□□□ -1.11
SNX13-201ENST00000409076 SERPINA13PQ6UXR4 307 aa8.14□□□□□ -1.11
SNX13-201ENST00000409076 UBE2R2Q712K3 238 aaPredicted RBP8.14□□□□□ -1.11
SNX13-201ENST00000409076 STK40Q8N2I9 435 aa8.14□□□□□ -1.11
SNX13-201ENST00000409076 SLC16A10Q8TF71 515 aa8.14□□□□□ -1.11
SNX13-201ENST00000409076 SORCS1Q8WY21 1168 aa8.14□□□□□ -1.11
SNX13-201ENST00000409076 ARSGQ96EG1 525 aa8.14□□□□□ -1.11
SNX13-201ENST00000409076 MAELQ96JY0 434 aaKnown RBP8.14□□□□□ -1.11
SNX13-201ENST00000409076 TRMOQ9BU70 441 aa8.14□□□□□ -1.11
SNX13-201ENST00000409076 INTS10Q9NVR2 710 aaKnown RBP8.14□□□□□ -1.11
SNX13-201ENST00000409076 C3orf18Q9UK00 162 aa8.14□□□□□ -1.11
SNX13-201ENST00000409076 PPP2R3BQ9Y5P8 575 aa8.14□□□□□ -1.11
SNX13-201ENST00000409076 COL1A2P08123 1366 aa8.14□□□□□ -1.11
SNX13-201ENST00000409076 FPGTO14772 594 aa8.14□□□□□ -1.11
SNX13-201ENST00000409076 ACOX3O15254 700 aa8.14□□□□□ -1.11
SNX13-201ENST00000409076 BMP10O95393 424 aa8.14□□□□□ -1.11
SNX13-201ENST00000409076 FHP07954 510 aa8.14□□□□□ -1.11
SNX13-201ENST00000409076 IFI30P13284 250 aa8.14□□□□□ -1.11
SNX13-201ENST00000409076 ITGALP20701 1170 aa8.14□□□□□ -1.11
SNX13-201ENST00000409076 SSTR4P31391 388 aa8.14□□□□□ -1.11
SNX13-201ENST00000409076 CSKP41240 450 aa8.14□□□□□ -1.11
SNX13-201ENST00000409076 SLC14A1Q13336 389 aa8.14□□□□□ -1.11
SNX13-201ENST00000409076 ZNF829Q3KNS6 432 aaPredicted RBP8.14□□□□□ -1.11
SNX13-201ENST00000409076 USP39Q53GS9 565 aaKnown RBP8.14□□□□□ -1.11
SNX13-201ENST00000409076 CATSPEREQ5SY80 951 aa8.14□□□□□ -1.11
SNX13-201ENST00000409076 UBE2UQ5VVX9 321 aa8.14□□□□□ -1.11
SNX13-201ENST00000409076 RSPO2Q6UXX9 243 aaPredicted RBP8.14□□□□□ -1.11
SNX13-201ENST00000409076 BCDIN3DQ7Z5W3 292 aaKnown RBP8.14□□□□□ -1.11
SNX13-201ENST00000409076 ADHFE1Q8IWW8 467 aa8.14□□□□□ -1.11
SNX13-201ENST00000409076 GPR65Q8IYL9 337 aa8.14□□□□□ -1.11
SNX13-201ENST00000409076 DBF4BQ8NFT6 615 aa8.14□□□□□ -1.11
SNX13-201ENST00000409076 NACC2Q96BF6 587 aa8.14□□□□□ -1.11
SNX13-201ENST00000409076 RNF31Q96EP0 1072 aa8.14□□□□□ -1.11
SNX13-201ENST00000409076 ADGRE3Q9BY15 652 aa8.14□□□□□ -1.11
SNX13-201ENST00000409076 FBXO44Q9H4M3 255 aa8.14□□□□□ -1.11
SNX13-201ENST00000409076 REEP1Q9H902 201 aa8.14□□□□□ -1.11
SNX13-201ENST00000409076 VNN3Q9NY84 501 aa8.14□□□□□ -1.11
SNX13-201ENST00000409076 COQ3Q9NZJ6 369 aa8.14□□□□□ -1.11
SNX13-201ENST00000409076 MAGEL2Q9UJ55 1249 aa8.14□□□□□ -1.11
SNX13-201ENST00000409076 PCDHA9Q9Y5H5 950 aa8.14□□□□□ -1.11
SNX13-201ENST00000409076 SQORQ9Y6N5 450 aa8.14□□□□□ -1.11
SNX13-201ENST00000409076 PIKFYVEQ9Y2I7 2098 aa8.13□□□□□ -1.11
SNX13-201ENST00000409076 FAM234BA2RU67 622 aa8.13□□□□□ -1.11
SNX13-201ENST00000409076 GSAPA4D1B5 854 aa8.13□□□□□ -1.11
SNX13-201ENST00000409076 BBIP1A8MTZ0 92 aa8.13□□□□□ -1.11
SNX13-201ENST00000409076 ZNF99A8MXY4 864 aaPredicted RBP8.13□□□□□ -1.11
SNX13-201ENST00000409076 ANKRD66B4E2M5 251 aa8.13□□□□□ -1.11
SNX13-201ENST00000409076 CDH1P12830 882 aa8.13□□□□□ -1.11
SNX13-201ENST00000409076 PRKAR2AP13861 404 aaKnown RBP8.13□□□□□ -1.11
SNX13-201ENST00000409076 MVKQ03426 396 aa8.13□□□□□ -1.11
SNX13-201ENST00000409076 SYTL3Q4VX76 610 aa8.13□□□□□ -1.11
SNX13-201ENST00000409076 CCDC92Q53HC0 331 aaPredicted RBP8.13□□□□□ -1.11
SNX13-201ENST00000409076 CTSL3PQ5NE16 218 aa8.13□□□□□ -1.11
SNX13-201ENST00000409076 SIX5Q8N196 739 aa8.13□□□□□ -1.11
SNX13-201ENST00000409076 LILRA3Q8N6C8 439 aaPredicted RBP8.13□□□□□ -1.11
SNX13-201ENST00000409076 CD200R1Q8TD46 325 aa8.13□□□□□ -1.11
SNX13-201ENST00000409076 KAT2AQ92830 837 aa8.13□□□□□ -1.11
SNX13-201ENST00000409076 APIPQ96GX9 242 aa8.13□□□□□ -1.11
SNX13-201ENST00000409076 SLC22A12Q96S37 553 aa8.13□□□□□ -1.11
SNX13-201ENST00000409076 RAD18Q9NS91 495 aa8.13□□□□□ -1.11
SNX13-201ENST00000409076 SPEGQ15772 3267 aa8.13□□□□□ -1.11
SNX13-201ENST00000409076 SCN2AQ99250 2005 aa8.13□□□□□ -1.11
SNX13-201ENST00000409076 MGAT4DA6NG13 374 aa8.13□□□□□ -1.11
SNX13-201ENST00000409076 EFCAB9A8MZ26 197 aa8.13□□□□□ -1.11
SNX13-201ENST00000409076 ABCB7O75027 752 aa8.13□□□□□ -1.11
SNX13-201ENST00000409076 SNX4O95219 450 aa8.13□□□□□ -1.11
SNX13-201ENST00000409076 PDYNP01213 254 aa8.13□□□□□ -1.11
SNX13-201ENST00000409076 ALDH2P05091 517 aa8.13□□□□□ -1.11
SNX13-201ENST00000409076 KRT8P05787 483 aa8.13□□□□□ -1.11
SNX13-201ENST00000409076 ZNF7P17097 686 aaPredicted RBP8.13□□□□□ -1.11
SNX13-201ENST00000409076 ENGP17813 658 aa8.13□□□□□ -1.11
SNX13-201ENST00000409076 EPORP19235 508 aa8.13□□□□□ -1.11
SNX13-201ENST00000409076 TTPAP49638 278 aa8.13□□□□□ -1.11
SNX13-201ENST00000409076 BCL2L1Q07817 233 aa8.13□□□□□ -1.11
SNX13-201ENST00000409076 CHIT1Q13231 466 aa8.13□□□□□ -1.11
SNX13-201ENST00000409076 NAE1Q13564 534 aa8.13□□□□□ -1.11
SNX13-201ENST00000409076 RFX4Q33E94 735 aa8.13□□□□□ -1.11
SNX13-201ENST00000409076 TRIM48Q8IWZ4 208 aa8.13□□□□□ -1.11
SNX13-201ENST00000409076 DEPDC4Q8N2C3 294 aa8.13□□□□□ -1.11
SNX13-201ENST00000409076 CHDHQ8NE62 594 aaPredicted RBP8.13□□□□□ -1.11
SNX13-201ENST00000409076 TANKQ92844 425 aa8.13□□□□□ -1.11
SNX13-201ENST00000409076 CITED4Q96RK1 184 aa8.13□□□□□ -1.11
SNX13-201ENST00000409076 TCF25Q9BQ70 676 aa8.13□□□□□ -1.11
SNX13-201ENST00000409076 YIPF4Q9BSR8 244 aa8.13□□□□□ -1.11
SNX13-201ENST00000409076 CNPPD1Q9BV87 410 aa8.13□□□□□ -1.11
SNX13-201ENST00000409076 TRIM54Q9BYV2 358 aa8.13□□□□□ -1.11
SNX13-201ENST00000409076 ZFYVE1Q9HBF4 777 aa8.13□□□□□ -1.11
SNX13-201ENST00000409076 PLAGL1Q9UM63 463 aa8.13□□□□□ -1.11
SNX13-201ENST00000409076 TLR6Q9Y2C9 796 aa8.13□□□□□ -1.11
SNX13-201ENST00000409076 ARIH1Q9Y4X5 557 aaPredicted RBP8.13□□□□□ -1.11
SNX13-201ENST00000409076 SPAG17Q6Q759 2223 aa8.13□□□□□ -1.11
SNX13-201ENST00000409076 J3KTA2 159 aa8.13□□□□□ -1.11
SNX13-201ENST00000409076 AIREO43918 545 aa8.13□□□□□ -1.11
SNX13-201ENST00000409076 CBFA2T3O75081 653 aa8.13□□□□□ -1.11
SNX13-201ENST00000409076 OXSR1O95747 527 aaPredicted RBP8.13□□□□□ -1.11
SNX13-201ENST00000409076 OTCP00480 354 aa8.13□□□□□ -1.11
SNX13-201ENST00000409076 CHI3L1P36222 383 aaPredicted RBP8.13□□□□□ -1.11
SNX13-201ENST00000409076 SLC19A1P41440 591 aa8.13□□□□□ -1.11
SNX13-201ENST00000409076 HCAR3P49019 387 aa8.13□□□□□ -1.11
SNX13-201ENST00000409076 RPS14P62263 151 aaKnown RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms