RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 IGLV5-37A0A075B6J1 123 aa4.54□□□□□ -1.68
HMGB3P18-201ENST00000406327 NEMP2A6NFY4 417 aa4.54□□□□□ -1.68
HMGB3P18-201ENST00000406327 YDJCA8MPS7 323 aa4.54□□□□□ -1.68
HMGB3P18-201ENST00000406327 PRR32B1ATL7 298 aa4.54□□□□□ -1.68
HMGB3P18-201ENST00000406327 DDX39AO00148 427 aaKnown RBP4.54□□□□□ -1.68
HMGB3P18-201ENST00000406327 MID1O15344 667 aa4.54□□□□□ -1.68
HMGB3P18-201ENST00000406327 ZNHIT1O43257 154 aa4.54□□□□□ -1.68
HMGB3P18-201ENST00000406327 AP5Z1O43299 807 aa4.54□□□□□ -1.68
HMGB3P18-201ENST00000406327 CSF2RAP15509 400 aa4.54□□□□□ -1.68
HMGB3P18-201ENST00000406327 SCP2P22307 547 aa4.54□□□□□ -1.68
HMGB3P18-201ENST00000406327 CBLP22681 906 aa4.54□□□□□ -1.68
HMGB3P18-201ENST00000406327 PSMC4P43686 418 aa4.54□□□□□ -1.68
HMGB3P18-201ENST00000406327 ABCG1P45844 678 aa4.54□□□□□ -1.68
HMGB3P18-201ENST00000406327 CRKLP46109 303 aaKnown RBP4.54□□□□□ -1.68
HMGB3P18-201ENST00000406327 ASIC1P78348 528 aa4.54□□□□□ -1.68
HMGB3P18-201ENST00000406327 DLK1P80370 383 aa4.54□□□□□ -1.68
HMGB3P18-201ENST00000406327 ZNF155Q12901 538 aaPredicted RBP4.54□□□□□ -1.68
HMGB3P18-201ENST00000406327 COASYQ13057 564 aa4.54□□□□□ -1.68
HMGB3P18-201ENST00000406327 RCN2Q14257 317 aa4.54□□□□□ -1.68
HMGB3P18-201ENST00000406327 ZNF789Q5FWF6 425 aa4.54□□□□□ -1.68
HMGB3P18-201ENST00000406327 CASC4Q6P4E1 433 aa4.54□□□□□ -1.68
HMGB3P18-201ENST00000406327 NOTUMQ6P988 496 aa4.54□□□□□ -1.68
HMGB3P18-201ENST00000406327 LINGO4Q6UY18 593 aa4.54□□□□□ -1.68
HMGB3P18-201ENST00000406327 PACS1Q6VY07 963 aa4.54□□□□□ -1.68
HMGB3P18-201ENST00000406327 C15orf39Q6ZRI6 1047 aa4.54□□□□□ -1.68
HMGB3P18-201ENST00000406327 C1orf87Q8N0U7 546 aa4.54□□□□□ -1.68
HMGB3P18-201ENST00000406327 GBGT1Q8N5D6 347 aa4.54□□□□□ -1.68
HMGB3P18-201ENST00000406327 ARL10Q8N8L6 244 aa4.54□□□□□ -1.68
HMGB3P18-201ENST00000406327 OR7G3Q8NG95 312 aa4.54□□□□□ -1.68
HMGB3P18-201ENST00000406327 MGARPQ8TDB4 240 aa4.54□□□□□ -1.68
HMGB3P18-201ENST00000406327 SSMEM1Q8WWF3 244 aa4.54□□□□□ -1.68
HMGB3P18-201ENST00000406327 SEMA4DQ92854 862 aa4.54□□□□□ -1.68
HMGB3P18-201ENST00000406327 EXOC4Q96A65 974 aa4.54□□□□□ -1.68
HMGB3P18-201ENST00000406327 TMEM19Q96HH6 336 aa4.54□□□□□ -1.68
HMGB3P18-201ENST00000406327 ABHD8Q96I13 439 aa4.54□□□□□ -1.68
HMGB3P18-201ENST00000406327 CSF3RQ99062 836 aa4.54□□□□□ -1.68
HMGB3P18-201ENST00000406327 PARK7Q99497 189 aaKnown RBP4.54□□□□□ -1.68
HMGB3P18-201ENST00000406327 SLA2Q9H6Q3 261 aa4.54□□□□□ -1.68
HMGB3P18-201ENST00000406327 FKRPQ9H9S5 495 aa4.54□□□□□ -1.68
HMGB3P18-201ENST00000406327 CDH20Q9HBT6 801 aa4.54□□□□□ -1.68
HMGB3P18-201ENST00000406327 TMEM30AQ9NV96 361 aa4.54□□□□□ -1.68
HMGB3P18-201ENST00000406327 MTUS1Q9ULD2 1270 aa4.54□□□□□ -1.68
HMGB3P18-201ENST00000406327 IFT172Q9UG01 1749 aa4.54□□□□□ -1.68
HMGB3P18-201ENST00000406327 A2ML1A8K2U0 1454 aa4.54□□□□□ -1.68
HMGB3P18-201ENST00000406327 PTPRMP28827 1452 aa4.54□□□□□ -1.68
HMGB3P18-201ENST00000406327 KDM5AP29375 1690 aaKnown RBP4.54□□□□□ -1.68
HMGB3P18-201ENST00000406327 RIMS2Q9UQ26 1411 aa4.54□□□□□ -1.68
HMGB3P18-201ENST00000406327 A0A1W2PP64 1363 aa4.53□□□□□ -1.68
HMGB3P18-201ENST00000406327 ABCC11Q96J66 1382 aa4.53□□□□□ -1.68
HMGB3P18-201ENST00000406327 TULP4Q9NRJ4 1543 aa4.53□□□□□ -1.68
HMGB3P18-201ENST00000406327 SIGLEC1Q9BZZ2 1709 aa4.53□□□□□ -1.68
HMGB3P18-201ENST00000406327 IGLV5-52A0A0A0MRZ9 124 aa4.53□□□□□ -1.68
HMGB3P18-201ENST00000406327 ZCWPW2A0A1B0GU75 182 aa4.53□□□□□ -1.68
HMGB3P18-201ENST00000406327 HYKKA2RU49 373 aa4.53□□□□□ -1.68
HMGB3P18-201ENST00000406327 C5orf52A6NGY3 159 aa4.53□□□□□ -1.68
HMGB3P18-201ENST00000406327 OR10H2O60403 315 aa4.53□□□□□ -1.68
HMGB3P18-201ENST00000406327 PDE9AO76083 593 aa4.53□□□□□ -1.68
HMGB3P18-201ENST00000406327 CLDN14O95500 239 aa4.53□□□□□ -1.68
HMGB3P18-201ENST00000406327 TOMM40O96008 361 aa4.53□□□□□ -1.68
HMGB3P18-201ENST00000406327 PNPP00491 289 aa4.53□□□□□ -1.68
HMGB3P18-201ENST00000406327 IGHV2-70P01814 119 aa4.53□□□□□ -1.68
HMGB3P18-201ENST00000406327 C9P02748 559 aa4.53□□□□□ -1.68
HMGB3P18-201ENST00000406327 INHBAP08476 426 aa4.53□□□□□ -1.68
HMGB3P18-201ENST00000406327 EEF2P13639 858 aaKnown RBP4.53□□□□□ -1.68
HMGB3P18-201ENST00000406327 CD22P20273 847 aa4.53□□□□□ -1.68
HMGB3P18-201ENST00000406327 CCKBRP32239 447 aa4.53□□□□□ -1.68
HMGB3P18-201ENST00000406327 WNT5AP41221 380 aa4.53□□□□□ -1.68
HMGB3P18-201ENST00000406327 PCYT1AP49585 367 aa4.53□□□□□ -1.68
HMGB3P18-201ENST00000406327 RPS18P62269 152 aaKnown RBP4.53□□□□□ -1.68
HMGB3P18-201ENST00000406327 POLR2LP62875 67 aaKnown RBP4.53□□□□□ -1.68
HMGB3P18-201ENST00000406327 ARF5P84085 180 aa4.53□□□□□ -1.68
HMGB3P18-201ENST00000406327 EGR4Q05215 589 aa4.53□□□□□ -1.68
HMGB3P18-201ENST00000406327 TROAPQ12815 778 aa4.53□□□□□ -1.68
HMGB3P18-201ENST00000406327 LEXMQ3ZCV2 418 aa4.53□□□□□ -1.68
HMGB3P18-201ENST00000406327 GRTP1Q5TC63 336 aa4.53□□□□□ -1.68
HMGB3P18-201ENST00000406327 C11orf63Q6NUN7 778 aa4.53□□□□□ -1.68
HMGB3P18-201ENST00000406327 GBP6Q6ZN66 633 aa4.53□□□□□ -1.68
HMGB3P18-201ENST00000406327 DSG4Q86SJ6 1040 aa4.53□□□□□ -1.68
HMGB3P18-201ENST00000406327 ZSCAN30Q86W11 494 aa4.53□□□□□ -1.68
HMGB3P18-201ENST00000406327 COMMD2Q86X83 199 aa4.53□□□□□ -1.68
HMGB3P18-201ENST00000406327 GPALPP1Q8IXQ4 340 aa4.53□□□□□ -1.68
HMGB3P18-201ENST00000406327 CLYBLQ8N0X4 340 aa4.53□□□□□ -1.68
HMGB3P18-201ENST00000406327 PGBD5Q8N414 524 aa4.53□□□□□ -1.68
HMGB3P18-201ENST00000406327 NEXN-AS1Q8NBZ9 246 aa4.53□□□□□ -1.68
HMGB3P18-201ENST00000406327 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.53□□□□□ -1.68
HMGB3P18-201ENST00000406327 ZFAND2BQ8WV99 257 aa4.53□□□□□ -1.68
HMGB3P18-201ENST00000406327 HEXDCQ8WVB3 486 aa4.53□□□□□ -1.68
HMGB3P18-201ENST00000406327 RAD54LQ92698 747 aa4.53□□□□□ -1.68
HMGB3P18-201ENST00000406327 DAZLQ92904 295 aaKnown RBP4.53□□□□□ -1.68
HMGB3P18-201ENST00000406327 ABTB1Q969K4 478 aaPredicted RBP4.53□□□□□ -1.68
HMGB3P18-201ENST00000406327 ANP32EQ9BTT0 268 aa4.53□□□□□ -1.68
HMGB3P18-201ENST00000406327 C1QTNF7Q9BXJ2 289 aa4.53□□□□□ -1.68
HMGB3P18-201ENST00000406327 TMEM206Q9H813 350 aa4.53□□□□□ -1.68
HMGB3P18-201ENST00000406327 MYNNQ9NPC7 610 aa4.53□□□□□ -1.68
HMGB3P18-201ENST00000406327 KLHL9Q9P2J3 617 aa4.53□□□□□ -1.68
HMGB3P18-201ENST00000406327 WNT16Q9UBV4 365 aa4.53□□□□□ -1.68
HMGB3P18-201ENST00000406327 SPIN1Q9Y657 262 aaPredicted RBP4.53□□□□□ -1.68
HMGB3P18-201ENST00000406327 MYOM1P52179 1685 aa4.53□□□□□ -1.68
HMGB3P18-201ENST00000406327 ZC3H13Q5T200 1668 aaKnown RBP4.53□□□□□ -1.68
HMGB3P18-201ENST00000406327 TMEM131LA2VDJ0 1609 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms