RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 GABARAPL1Q9H0R8 117 aa9.6□□□□□ -0.87
MSH2-202ENST00000406134 ABCG8Q9H221 673 aa9.6□□□□□ -0.87
MSH2-202ENST00000406134 ACTR8Q9H981 624 aa9.6□□□□□ -0.87
MSH2-202ENST00000406134 H0Y626 953 aa9.6□□□□□ -0.87
MSH2-202ENST00000406134 SLC16A6O15403 523 aa9.6□□□□□ -0.87
MSH2-202ENST00000406134 XYLBO75191 536 aa9.6□□□□□ -0.87
MSH2-202ENST00000406134 TRIM16O95361 564 aa9.6□□□□□ -0.87
MSH2-202ENST00000406134 CST1P01037 141 aa9.6□□□□□ -0.87
MSH2-202ENST00000406134 IL6P05231 212 aa9.6□□□□□ -0.87
MSH2-202ENST00000406134 CTSAP10619 480 aa9.6□□□□□ -0.87
MSH2-202ENST00000406134 MAGEA8P43361 318 aa9.6□□□□□ -0.87
MSH2-202ENST00000406134 AP1S1P61966 158 aa9.6□□□□□ -0.87
MSH2-202ENST00000406134 ELAVL2Q12926 359 aaKnown RBP9.6□□□□□ -0.87
MSH2-202ENST00000406134 MAPKAPK3Q16644 382 aa9.6□□□□□ -0.87
MSH2-202ENST00000406134 PTRHD1Q6GMV3 140 aaKnown RBP9.6□□□□□ -0.87
MSH2-202ENST00000406134 DCP2Q8IU60 420 aaKnown RBP9.6□□□□□ -0.87
MSH2-202ENST00000406134 SLC15A4Q8N697 577 aa9.6□□□□□ -0.87
MSH2-202ENST00000406134 ZNF566Q969W8 418 aa9.6□□□□□ -0.87
MSH2-202ENST00000406134 SCLYQ96I15 445 aa9.6□□□□□ -0.87
MSH2-202ENST00000406134 IGSF21Q96ID5 467 aa9.6□□□□□ -0.87
MSH2-202ENST00000406134 HTATIP2Q9BUP3 242 aa9.6□□□□□ -0.87
MSH2-202ENST00000406134 CLPBQ9H078 707 aa9.6□□□□□ -0.87
MSH2-202ENST00000406134 MAGIXQ9H6Y5 334 aa9.6□□□□□ -0.87
MSH2-202ENST00000406134 PPIL1Q9Y3C6 166 aa9.6□□□□□ -0.87
MSH2-202ENST00000406134 SLC30A1Q9Y6M5 507 aa9.6□□□□□ -0.87
MSH2-202ENST00000406134 PMF1-BGLAPU3KQ54 211 aa9.6□□□□□ -0.87
MSH2-202ENST00000406134 CCDC88CQ9P219 2028 aa9.6□□□□□ -0.87
MSH2-202ENST00000406134 GLYATL1P3A0A0U1RQE8 302 aa9.6□□□□□ -0.87
MSH2-202ENST00000406134 SLC1A7O00341 560 aa9.6□□□□□ -0.87
MSH2-202ENST00000406134 RGS14O43566 566 aa9.6□□□□□ -0.87
MSH2-202ENST00000406134 SULT1C4O75897 302 aa9.6□□□□□ -0.87
MSH2-202ENST00000406134 LATS1O95835 1130 aa9.6□□□□□ -0.87
MSH2-202ENST00000406134 SERPINA1P01009 418 aa9.6□□□□□ -0.87
MSH2-202ENST00000406134 ZNF7P17097 686 aaPredicted RBP9.6□□□□□ -0.87
MSH2-202ENST00000406134 GNPDA1P46926 289 aa9.6□□□□□ -0.87
MSH2-202ENST00000406134 CSNK1DP48730 415 aa9.6□□□□□ -0.87
MSH2-202ENST00000406134 TUFMP49411 452 aaKnown RBP9.6□□□□□ -0.87
MSH2-202ENST00000406134 CLK3P49761 638 aaKnown RBP9.6□□□□□ -0.87
MSH2-202ENST00000406134 NEK2P51955 445 aa9.6□□□□□ -0.87
MSH2-202ENST00000406134 GABARAPL2P60520 117 aa9.6□□□□□ -0.87
MSH2-202ENST00000406134 LMAN2Q12907 356 aa9.6□□□□□ -0.87
MSH2-202ENST00000406134 BOP1Q14137 746 aaKnown RBP9.6□□□□□ -0.87
MSH2-202ENST00000406134 SKIV2LQ15477 1246 aaKnown RBP9.6□□□□□ -0.87
MSH2-202ENST00000406134 IMPG1Q17R60 797 aa9.6□□□□□ -0.87
MSH2-202ENST00000406134 GGTA1PQ4G0N0 100 aa9.6□□□□□ -0.87
MSH2-202ENST00000406134 ATP13A5Q4VNC0 1218 aa9.6□□□□□ -0.87
MSH2-202ENST00000406134 CPZQ66K79 652 aa9.6□□□□□ -0.87
MSH2-202ENST00000406134 ATG9BQ674R7 924 aa9.6□□□□□ -0.87
MSH2-202ENST00000406134 METTL2BQ6P1Q9 378 aaKnown RBP9.6□□□□□ -0.87
MSH2-202ENST00000406134 TSEN54Q7Z6J9 526 aaKnown RBP9.6□□□□□ -0.87
MSH2-202ENST00000406134 BPIFB6Q8NFQ5 453 aa9.6□□□□□ -0.87
MSH2-202ENST00000406134 SIGLEC11Q96RL6 698 aa9.6□□□□□ -0.87
MSH2-202ENST00000406134 STARD7Q9NQZ5 370 aa9.6□□□□□ -0.87
MSH2-202ENST00000406134 OPTCQ9UBM4 332 aa9.6□□□□□ -0.87
MSH2-202ENST00000406134 LIMD1Q9UGP4 676 aa9.6□□□□□ -0.87
MSH2-202ENST00000406134 BLOC1S6Q9UL45 172 aa9.6□□□□□ -0.87
MSH2-202ENST00000406134 DENND4AQ7Z401 1863 aa9.59□□□□□ -0.87
MSH2-202ENST00000406134 A0A096LPI6 279 aa9.59□□□□□ -0.87
MSH2-202ENST00000406134 SLC28A1O00337 649 aa9.59□□□□□ -0.87
MSH2-202ENST00000406134 INMTO95050 263 aa9.59□□□□□ -0.87
MSH2-202ENST00000406134 C1SP09871 688 aa9.59□□□□□ -0.87
MSH2-202ENST00000406134 MYCLP1P12525 358 aaPredicted RBP9.59□□□□□ -0.87
MSH2-202ENST00000406134 AOAHP28039 575 aa9.59□□□□□ -0.87
MSH2-202ENST00000406134 EPHA2P29317 976 aa9.59□□□□□ -0.87
MSH2-202ENST00000406134 HMOX2P30519 316 aa9.59□□□□□ -0.87
MSH2-202ENST00000406134 TTKP33981 857 aa9.59□□□□□ -0.87
MSH2-202ENST00000406134 STK19P49842 368 aaPredicted RBP9.59□□□□□ -0.87
MSH2-202ENST00000406134 CLDN8P56748 225 aa9.59□□□□□ -0.87
MSH2-202ENST00000406134 ESRRGP62508 458 aa9.59□□□□□ -0.87
MSH2-202ENST00000406134 SMAD3P84022 425 aaKnown RBP9.59□□□□□ -0.87
MSH2-202ENST00000406134 MTAPQ13126 283 aa9.59□□□□□ -0.87
MSH2-202ENST00000406134 TXNDC8Q6A555 127 aa9.59□□□□□ -0.87
MSH2-202ENST00000406134 ANKRD46Q86W74 232 aa9.59□□□□□ -0.87
MSH2-202ENST00000406134 PTOV1Q86YD1 416 aa9.59□□□□□ -0.87
MSH2-202ENST00000406134 ZCCHC7Q8N3Z6 543 aaKnown RBP9.59□□□□□ -0.87
MSH2-202ENST00000406134 GLB1L3Q8NCI6 653 aaPredicted RBP9.59□□□□□ -0.87
MSH2-202ENST00000406134 CNIH3Q8TBE1 160 aa9.59□□□□□ -0.87
MSH2-202ENST00000406134 FAR1Q8WVX9 515 aa9.59□□□□□ -0.87
MSH2-202ENST00000406134 TBC1D20Q96BZ9 403 aa9.59□□□□□ -0.87
MSH2-202ENST00000406134 FUNDC2Q9BWH2 189 aa9.59□□□□□ -0.87
MSH2-202ENST00000406134 NACA2Q9H009 215 aa9.59□□□□□ -0.87
MSH2-202ENST00000406134 C1orf109Q9NX04 203 aa9.59□□□□□ -0.87
MSH2-202ENST00000406134 SRRDQ9UH36 339 aa9.59□□□□□ -0.87
MSH2-202ENST00000406134 CXCL10P02778 98 aa9.59□□□□□ -0.87
MSH2-202ENST00000406134 DGKAP23743 735 aa9.59□□□□□ -0.87
MSH2-202ENST00000406134 IDUAP35475 653 aa9.59□□□□□ -0.87
MSH2-202ENST00000406134 MASP1P48740 699 aa9.59□□□□□ -0.87
MSH2-202ENST00000406134 DAPP51397 102 aa9.59□□□□□ -0.87
MSH2-202ENST00000406134 HNRNPFP52597 415 aaKnown RBP9.59□□□□□ -0.87
MSH2-202ENST00000406134 CHRNB3Q05901 458 aa9.59□□□□□ -0.87
MSH2-202ENST00000406134 RAPSNQ13702 412 aa9.59□□□□□ -0.87
MSH2-202ENST00000406134 LAPTM4AQ15012 233 aa9.59□□□□□ -0.87
MSH2-202ENST00000406134 ZNF829Q3KNS6 432 aaPredicted RBP9.59□□□□□ -0.87
MSH2-202ENST00000406134 ASTLQ6HA08 431 aaPredicted RBP9.59□□□□□ -0.87
MSH2-202ENST00000406134 CES5AQ6NT32 575 aa9.59□□□□□ -0.87
MSH2-202ENST00000406134 GALNT10Q86SR1 603 aa9.59□□□□□ -0.87
MSH2-202ENST00000406134 CBARPQ8N350 705 aaPredicted RBP9.59□□□□□ -0.87
MSH2-202ENST00000406134 BEND7Q8N7W2 519 aaPredicted RBP9.59□□□□□ -0.87
MSH2-202ENST00000406134 ARL14EPQ8N8R7 260 aaPredicted RBP9.59□□□□□ -0.87
MSH2-202ENST00000406134 TESCQ96BS2 214 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms