RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 EVPLLA8MZ36 301 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 WNT10BO00744 389 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 NEMP1O14524 444 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 KLF11O14901 512 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 SLC31A2O15432 143 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 ZNF862O60290 1169 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 AKR7A3O95154 331 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 PIGRP01833 764 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 CRYABP02511 175 aaKnown RBP6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 CFHP08603 1231 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 CSH1P0DML2 217 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 CSH2P0DML3 217 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 MCF2P10911 925 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 TCF4P15884 667 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 TGM1P22735 817 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 KDELR1P24390 212 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 CD40LGP29965 261 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 ELK3P41970 407 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 CCR4P51679 360 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 ACTR2P61160 394 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 FLI1Q01543 452 aaPredicted RBP6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 DGKZQ13574 1117 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 FAM187BQ17R55 369 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 FAM110CQ1W6H9 321 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 ZNF699Q32M78 642 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 ACSBG2Q5FVE4 666 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 FNBP1LQ5T0N5 605 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 FAM91A1Q658Y4 838 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 RFWD3Q6PCD5 774 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 TTC7BQ86TV6 843 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 PLCZ1Q86YW0 608 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 NUDCD3Q8IVD9 361 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 PRSS58Q8IYP2 241 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 ATG16L2Q8NAA4 619 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 OR2L3Q8NG85 312 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 DPF1Q92782 380 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 PTCD3Q96EY7 689 aaKnown RBP6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 CITED4Q96RK1 184 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 MIPEPQ99797 713 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 SLC19A3Q9BZV2 496 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 TMEM39BQ9GZU3 492 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 C11orf49Q9H6J7 331 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 XPNPEP1Q9NQW7 623 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 CISHQ9NSE2 258 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 PAK5Q9P286 719 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 RIPK3Q9Y572 518 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 A0A1W2PQ72 361 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 TRIM49D1C9J1S8 452 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 ACOX3O15254 700 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 NDUFS2O75306 463 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 ENO1P06733 434 aaKnown RBP6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 MSX1P28360 303 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 OR3A3P47888 321 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 GRIA4P48058 902 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 EFNA5P52803 228 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 SEMA5AQ13591 1074 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 ANKRD22Q5VYY1 191 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 IL20RBQ6UXL0 311 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 RNF19BQ6ZMZ0 732 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 HORMAD1Q86X24 394 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 METTL23Q86XA0 190 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 CLYBLQ8N0X4 340 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 PPP1R35Q8TAP8 253 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 CHPT1Q8WUD6 406 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 KBTBD7Q8WVZ9 684 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 TMEM143Q96AN5 459 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 MTBPQ96DY7 904 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 C5orf34Q96MH7 638 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 DERL2Q9GZP9 239 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 FAM96AQ9H5X1 160 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 EXO5Q9H790 373 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 SEPSECSQ9HD40 501 aaKnown RBP6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 MYOZ2Q9NPC6 264 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 EIF2B3Q9NR50 452 aaKnown RBP6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 FBXO6Q9NRD1 293 aaPredicted RBP6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 CENPMQ9NSP4 180 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 TAS2R1Q9NYW7 299 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 DHRS7Q9Y394 339 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 PCDHGA5Q9Y5G8 931 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 WDFY4Q6ZS81 3184 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 A0A1W2PRG6 482 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 TCRBV9S1A1TA0A576 114 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 CHADO15335 359 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 TOX3O15405 576 aaPredicted RBP6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 EIF1BO60739 113 aaKnown RBP6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 ZFPL1O95159 310 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 FUCA1P04066 466 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 LCKP06239 509 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 GSTP1P09211 210 aaKnown RBP6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 HOXD8P13378 290 aaPredicted RBP6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 RAB3AP20336 220 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 LCN1P31025 176 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 EIF1P41567 113 aaKnown RBP6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 AP1S1P61966 158 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 DSG1Q02413 1049 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 MAP3K10Q02779 954 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 SLC18A2Q05940 514 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 RASGEF1BQ0VAM2 473 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms