RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 CHST15Q7LFX5 561 aaPredicted RBP17.9■□□□□ 0.46
CHRFAM7A-202ENST00000397827 SLC22A15Q8IZD6 547 aa17.9■□□□□ 0.46
CHRFAM7A-202ENST00000397827 AURKBQ96GD4 344 aaPredicted RBP17.9■□□□□ 0.46
CHRFAM7A-202ENST00000397827 C1orf109Q9NX04 203 aa17.9■□□□□ 0.46
CHRFAM7A-202ENST00000397827 ZNF639Q9UID6 485 aa17.9■□□□□ 0.46
CHRFAM7A-202ENST00000397827 ATP11BQ9Y2G3 1177 aa17.9■□□□□ 0.46
CHRFAM7A-202ENST00000397827 DLGAP4Q9Y2H0 992 aa17.9■□□□□ 0.46
CHRFAM7A-202ENST00000397827 A0A087WXM4 84 aa17.9■□□□□ 0.46
CHRFAM7A-202ENST00000397827 TRAV19A0A0A6YYK7 116 aa17.9■□□□□ 0.46
CHRFAM7A-202ENST00000397827 RAP2AP10114 183 aa17.9■□□□□ 0.46
CHRFAM7A-202ENST00000397827 LAG3P18627 525 aa17.9■□□□□ 0.46
CHRFAM7A-202ENST00000397827 BCAP31P51572 246 aa17.9■□□□□ 0.46
CHRFAM7A-202ENST00000397827 BOP1Q14137 746 aaKnown RBP17.9■□□□□ 0.46
CHRFAM7A-202ENST00000397827 NKG7Q16617 165 aa17.9■□□□□ 0.46
CHRFAM7A-202ENST00000397827 FAM98BQ52LJ0 330 aaKnown RBP17.9■□□□□ 0.46
CHRFAM7A-202ENST00000397827 USP39Q53GS9 565 aaKnown RBP17.9■□□□□ 0.46
CHRFAM7A-202ENST00000397827 TMEM25Q86YD3 366 aa17.9■□□□□ 0.46
CHRFAM7A-202ENST00000397827 CHST14Q8NCH0 376 aa17.9■□□□□ 0.46
CHRFAM7A-202ENST00000397827 TNIP2Q8NFZ5 429 aa17.9■□□□□ 0.46
CHRFAM7A-202ENST00000397827 ECHDC3Q96DC8 303 aa17.9■□□□□ 0.46
CHRFAM7A-202ENST00000397827 CLIP3Q96DZ5 547 aa17.9■□□□□ 0.46
CHRFAM7A-202ENST00000397827 NEURL2Q9BR09 285 aa17.9■□□□□ 0.46
CHRFAM7A-202ENST00000397827 SLC32A1Q9H598 525 aa17.9■□□□□ 0.46
CHRFAM7A-202ENST00000397827 CLMPQ9H6B4 373 aa17.9■□□□□ 0.46
CHRFAM7A-202ENST00000397827 LIMD1Q9UGP4 676 aa17.9■□□□□ 0.46
CHRFAM7A-202ENST00000397827 ADGRE2Q9UHX3 823 aa17.9■□□□□ 0.46
CHRFAM7A-202ENST00000397827 TMPRSS11EQ9UL52 423 aa17.9■□□□□ 0.46
CHRFAM7A-202ENST00000397827 DENND4CQ5VZ89 1909 aa17.89■□□□□ 0.46
CHRFAM7A-202ENST00000397827 PLXNB3Q9ULL4 1909 aa17.89■□□□□ 0.46
CHRFAM7A-202ENST00000397827 GMNNO75496 209 aa17.89■□□□□ 0.45
CHRFAM7A-202ENST00000397827 WDR47O94967 919 aa17.89■□□□□ 0.45
CHRFAM7A-202ENST00000397827 C1SP09871 688 aa17.89■□□□□ 0.45
CHRFAM7A-202ENST00000397827 C7P10643 843 aa17.89■□□□□ 0.45
CHRFAM7A-202ENST00000397827 MTHFRP42898 656 aa17.89■□□□□ 0.45
CHRFAM7A-202ENST00000397827 PHC1P78364 1004 aa17.89■□□□□ 0.45
CHRFAM7A-202ENST00000397827 CHRNB3Q05901 458 aa17.89■□□□□ 0.45
CHRFAM7A-202ENST00000397827 ABRAXAS1Q6UWZ7 409 aa17.89■□□□□ 0.45
CHRFAM7A-202ENST00000397827 SERPINA13PQ6UXR4 307 aa17.89■□□□□ 0.45
CHRFAM7A-202ENST00000397827 Q6ZVU0 165 aa17.89■□□□□ 0.45
CHRFAM7A-202ENST00000397827 ANKRD46Q86W74 232 aa17.89■□□□□ 0.45
CHRFAM7A-202ENST00000397827 ZNF548Q8NEK5 533 aaPredicted RBP17.89■□□□□ 0.45
CHRFAM7A-202ENST00000397827 C19orf43Q9BQ61 176 aa17.89■□□□□ 0.45
CHRFAM7A-202ENST00000397827 CD320Q9NPF0 282 aa17.89■□□□□ 0.45
CHRFAM7A-202ENST00000397827 TRNAU1APQ9NX07 287 aaKnown RBP17.89■□□□□ 0.45
CHRFAM7A-202ENST00000397827 FAM8A1Q9UBU6 413 aa17.89■□□□□ 0.45
CHRFAM7A-202ENST00000397827 OGDHLQ9ULD0 1010 aa17.89■□□□□ 0.45
CHRFAM7A-202ENST00000397827 NUP214P35658 2090 aaPredicted RBP17.89■□□□□ 0.45
CHRFAM7A-202ENST00000397827 TULP3O75386 442 aa17.89■□□□□ 0.45
CHRFAM7A-202ENST00000397827 IL6P05231 212 aa17.89■□□□□ 0.45
CHRFAM7A-202ENST00000397827 GSNP06396 782 aa17.89■□□□□ 0.45
CHRFAM7A-202ENST00000397827 LAPTM5Q13571 262 aa17.89■□□□□ 0.45
CHRFAM7A-202ENST00000397827 GCNT7Q6ZNI0 430 aa17.89■□□□□ 0.45
CHRFAM7A-202ENST00000397827 STK32CQ86UX6 486 aa17.89■□□□□ 0.45
CHRFAM7A-202ENST00000397827 C10orf111Q8N326 155 aa17.89■□□□□ 0.45
CHRFAM7A-202ENST00000397827 CHCHD4Q8N4Q1 142 aa17.89■□□□□ 0.45
CHRFAM7A-202ENST00000397827 SLC22A17Q8WUG5 538 aa17.89■□□□□ 0.45
CHRFAM7A-202ENST00000397827 SELENOMQ8WWX9 145 aa17.89■□□□□ 0.45
CHRFAM7A-202ENST00000397827 LMLNQ96KR4 655 aa17.89■□□□□ 0.45
CHRFAM7A-202ENST00000397827 BRD9Q9H8M2 597 aa17.89■□□□□ 0.45
CHRFAM7A-202ENST00000397827 C8orf4Q9NR00 106 aa17.89■□□□□ 0.45
CHRFAM7A-202ENST00000397827 B4GALT6Q9UBX8 382 aa17.89■□□□□ 0.45
CHRFAM7A-202ENST00000397827 PCDHGA11Q9Y5H2 935 aa17.89■□□□□ 0.45
CHRFAM7A-202ENST00000397827 H0Y858 1186 aa17.88■□□□□ 0.45
CHRFAM7A-202ENST00000397827 LILRB3O75022 631 aa17.88■□□□□ 0.45
CHRFAM7A-202ENST00000397827 DEAF1O75398 565 aaPredicted RBP17.88■□□□□ 0.45
CHRFAM7A-202ENST00000397827 C8AP07357 584 aa17.88■□□□□ 0.45
CHRFAM7A-202ENST00000397827 TACR1P25103 407 aa17.88■□□□□ 0.45
CHRFAM7A-202ENST00000397827 CDK9P50750 372 aaKnown RBP17.88■□□□□ 0.45
CHRFAM7A-202ENST00000397827 ARSFP54793 590 aa17.88■□□□□ 0.45
CHRFAM7A-202ENST00000397827 PPP1R8Q12972 351 aaKnown RBP17.88■□□□□ 0.45
CHRFAM7A-202ENST00000397827 TSSK3Q96PN8 268 aa17.88■□□□□ 0.45
CHRFAM7A-202ENST00000397827 TPK1Q9H3S4 243 aa17.88■□□□□ 0.45
CHRFAM7A-202ENST00000397827 PARVBQ9HBI1 364 aa17.88■□□□□ 0.45
CHRFAM7A-202ENST00000397827 TBC1D23Q9NUY8 699 aa17.88■□□□□ 0.45
CHRFAM7A-202ENST00000397827 TMEM39AQ9NV64 488 aa17.88■□□□□ 0.45
CHRFAM7A-202ENST00000397827 HCFC1R1Q9NWW0 138 aa17.88■□□□□ 0.45
CHRFAM7A-202ENST00000397827 HS3ST2Q9Y278 367 aa17.88■□□□□ 0.45
CHRFAM7A-202ENST00000397827 INVSQ9Y283 1065 aa17.88■□□□□ 0.45
CHRFAM7A-202ENST00000397827 KRT6AP02538 564 aa17.88■□□□□ 0.45
CHRFAM7A-202ENST00000397827 KRT6BP04259 564 aa17.88■□□□□ 0.45
CHRFAM7A-202ENST00000397827 CCR2P41597 374 aa17.88■□□□□ 0.45
CHRFAM7A-202ENST00000397827 KRT6CP48668 564 aa17.88■□□□□ 0.45
CHRFAM7A-202ENST00000397827 GPR141Q7Z602 305 aa17.88■□□□□ 0.45
CHRFAM7A-202ENST00000397827 METTL3Q86U44 580 aaKnown RBP17.88■□□□□ 0.45
CHRFAM7A-202ENST00000397827 CLVS1Q8IUQ0 354 aaPredicted RBP17.88■□□□□ 0.45
CHRFAM7A-202ENST00000397827 HS3ST5Q8IZT8 346 aa17.88■□□□□ 0.45
CHRFAM7A-202ENST00000397827 CLEC4FQ8N1N0 589 aa17.88■□□□□ 0.45
CHRFAM7A-202ENST00000397827 RNF175Q8N4F7 328 aa17.88■□□□□ 0.45
CHRFAM7A-202ENST00000397827 GLB1L3Q8NCI6 653 aaPredicted RBP17.88■□□□□ 0.45
CHRFAM7A-202ENST00000397827 SCAMP4Q969E2 229 aa17.88■□□□□ 0.45
CHRFAM7A-202ENST00000397827 MUS81Q96NY9 551 aa17.88■□□□□ 0.45
CHRFAM7A-202ENST00000397827 PCDHB14Q9Y5E9 798 aa17.88■□□□□ 0.45
CHRFAM7A-202ENST00000397827 NEDD8-MDP1E9PL57 170 aa17.87■□□□□ 0.45
CHRFAM7A-202ENST00000397827 FOXD2O60548 495 aaPredicted RBP17.87■□□□□ 0.45
CHRFAM7A-202ENST00000397827 FUCA1P04066 466 aa17.87■□□□□ 0.45
CHRFAM7A-202ENST00000397827 OR56A5P0C7T3 313 aa17.87■□□□□ 0.45
CHRFAM7A-202ENST00000397827 CBSLP0DN79 551 aa17.87■□□□□ 0.45
CHRFAM7A-202ENST00000397827 AOAHP28039 575 aa17.87■□□□□ 0.45
CHRFAM7A-202ENST00000397827 CBSP35520 551 aa17.87■□□□□ 0.45
CHRFAM7A-202ENST00000397827 ADARB1P78563 741 aaKnown RBP17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms