RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 DSELQ8IZU8 1212 aa13.46□□□□□ -0.25
SEC13-204ENST00000397099 PDIK1LQ8N165 341 aa13.46□□□□□ -0.25
SEC13-204ENST00000397099 ZBTB2Q8N680 514 aa13.46□□□□□ -0.25
SEC13-204ENST00000397099 CFAP61Q8NHU2 1237 aa13.46□□□□□ -0.25
SEC13-204ENST00000397099 LKAAEAR1Q8TD35 194 aa13.46□□□□□ -0.25
SEC13-204ENST00000397099 THAP4Q8WY91 577 aa13.46□□□□□ -0.25
SEC13-204ENST00000397099 ZUFSPQ96AP4 578 aa13.46□□□□□ -0.25
SEC13-204ENST00000397099 LRRC39Q96DD0 335 aa13.46□□□□□ -0.25
SEC13-204ENST00000397099 CLIP3Q96DZ5 547 aa13.46□□□□□ -0.25
SEC13-204ENST00000397099 SIGLEC10Q96LC7 697 aa13.46□□□□□ -0.25
SEC13-204ENST00000397099 DDX47Q9H0S4 455 aaKnown RBP13.46□□□□□ -0.25
SEC13-204ENST00000397099 ACTR5Q9H9F9 607 aaPredicted RBP13.46□□□□□ -0.25
SEC13-204ENST00000397099 STARD5Q9NSY2 213 aa13.46□□□□□ -0.25
SEC13-204ENST00000397099 C20orf96Q9NUD7 363 aaPredicted RBP13.46□□□□□ -0.25
SEC13-204ENST00000397099 IL17BQ9UHF5 180 aa13.46□□□□□ -0.25
SEC13-204ENST00000397099 SRPK3Q9UPE1 567 aa13.46□□□□□ -0.25
SEC13-204ENST00000397099 PLCL2Q9UPR0 1127 aa13.46□□□□□ -0.25
SEC13-204ENST00000397099 POLHQ9Y253 713 aa13.46□□□□□ -0.25
SEC13-204ENST00000397099 CRYL1Q9Y2S2 319 aa13.46□□□□□ -0.25
SEC13-204ENST00000397099 SEC16AO15027 2179 aa13.46□□□□□ -0.25
SEC13-204ENST00000397099 TARM1B6A8C7 271 aa13.45□□□□□ -0.26
SEC13-204ENST00000397099 GOLGA8KD6RF30 607 aa13.45□□□□□ -0.26
SEC13-204ENST00000397099 GOLGA8TH3BQL2 631 aa13.45□□□□□ -0.26
SEC13-204ENST00000397099 MEN1O00255 615 aa13.45□□□□□ -0.26
SEC13-204ENST00000397099 NKX2-8O15522 239 aa13.45□□□□□ -0.26
SEC13-204ENST00000397099 KATNA1O75449 491 aa13.45□□□□□ -0.26
SEC13-204ENST00000397099 CATP04040 527 aaKnown RBP13.45□□□□□ -0.26
SEC13-204ENST00000397099 CBSLP0DN79 551 aa13.45□□□□□ -0.26
SEC13-204ENST00000397099 CBSP35520 551 aa13.45□□□□□ -0.26
SEC13-204ENST00000397099 POLE2P56282 527 aa13.45□□□□□ -0.26
SEC13-204ENST00000397099 ILF2Q12905 390 aaKnown RBP13.45□□□□□ -0.26
SEC13-204ENST00000397099 ARHGAP19Q14CB8 494 aa13.45□□□□□ -0.26
SEC13-204ENST00000397099 ZC3H12BQ5HYM0 836 aaKnown RBP13.45□□□□□ -0.26
SEC13-204ENST00000397099 SPANXN3Q5MJ09 141 aa13.45□□□□□ -0.26
SEC13-204ENST00000397099 KIAA0408Q6ZU52 694 aa13.45□□□□□ -0.26
SEC13-204ENST00000397099 MICALCLQ6ZW33 695 aa13.45□□□□□ -0.26
SEC13-204ENST00000397099 CREG2Q8IUH2 290 aa13.45□□□□□ -0.26
SEC13-204ENST00000397099 PROKR1Q8TCW9 393 aa13.45□□□□□ -0.26
SEC13-204ENST00000397099 CT55Q8WUE5 264 aa13.45□□□□□ -0.26
SEC13-204ENST00000397099 DLG3Q92796 817 aa13.45□□□□□ -0.26
SEC13-204ENST00000397099 MR1Q95460 341 aa13.45□□□□□ -0.26
SEC13-204ENST00000397099 DHRS4Q9BTZ2 278 aa13.45□□□□□ -0.26
SEC13-204ENST00000397099 MENTQ9BUN1 341 aa13.45□□□□□ -0.26
SEC13-204ENST00000397099 NLNQ9BYT8 704 aa13.45□□□□□ -0.26
SEC13-204ENST00000397099 TRIM4Q9C037 500 aa13.45□□□□□ -0.26
SEC13-204ENST00000397099 SLC25A18Q9H1K4 315 aa13.45□□□□□ -0.26
SEC13-204ENST00000397099 SPHK1Q9NYA1 384 aa13.45□□□□□ -0.26
SEC13-204ENST00000397099 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.45□□□□□ -0.26
SEC13-204ENST00000397099 FARSAQ9Y285 508 aaKnown RBP13.45□□□□□ -0.26
SEC13-204ENST00000397099 PADI2Q9Y2J8 665 aa13.45□□□□□ -0.26
SEC13-204ENST00000397099 KLK4Q9Y5K2 254 aa13.45□□□□□ -0.26
SEC13-204ENST00000397099 PCM1Q15154 2024 aa13.44□□□□□ -0.26
SEC13-204ENST00000397099 C9J4A7 227 aa13.44□□□□□ -0.26
SEC13-204ENST00000397099 OR2B3O76000 313 aa13.44□□□□□ -0.26
SEC13-204ENST00000397099 TPBGLP0DKB5 382 aa13.44□□□□□ -0.26
SEC13-204ENST00000397099 OAS2P29728 719 aaKnown RBP13.44□□□□□ -0.26
SEC13-204ENST00000397099 RORAP35398 523 aa13.44□□□□□ -0.26
SEC13-204ENST00000397099 SKIV2L2P42285 1042 aaKnown RBP13.44□□□□□ -0.26
SEC13-204ENST00000397099 KCNAB2Q13303 367 aa13.44□□□□□ -0.26
SEC13-204ENST00000397099 TCTE1Q5JU00 501 aa13.44□□□□□ -0.26
SEC13-204ENST00000397099 YOD1Q5VVQ6 348 aaPredicted RBP13.44□□□□□ -0.26
SEC13-204ENST00000397099 C16orf46Q6P387 395 aa13.44□□□□□ -0.26
SEC13-204ENST00000397099 FBXO38Q6PIJ6 1188 aa13.44□□□□□ -0.26
SEC13-204ENST00000397099 ATG14Q6ZNE5 492 aa13.44□□□□□ -0.26
SEC13-204ENST00000397099 CDHR3Q6ZTQ4 885 aa13.44□□□□□ -0.26
SEC13-204ENST00000397099 GALNT7Q86SF2 657 aa13.44□□□□□ -0.26
SEC13-204ENST00000397099 LMNTD1Q8N9Z9 388 aa13.44□□□□□ -0.26
SEC13-204ENST00000397099 LINC01555Q8NAE3 123 aa13.44□□□□□ -0.26
SEC13-204ENST00000397099 FBXO15Q8NCQ5 510 aaPredicted RBP13.44□□□□□ -0.26
SEC13-204ENST00000397099 BBOF1Q8ND07 529 aa13.44□□□□□ -0.26
SEC13-204ENST00000397099 OR1L3Q8NH93 324 aa13.44□□□□□ -0.26
SEC13-204ENST00000397099 FLVCR1-AS1Q8TAF5 88 aa13.44□□□□□ -0.26
SEC13-204ENST00000397099 PPM1MQ96MI6 270 aa13.44□□□□□ -0.26
SEC13-204ENST00000397099 EBNA1BP2Q99848 306 aaKnown RBP13.44□□□□□ -0.26
SEC13-204ENST00000397099 ACTL8Q9H568 366 aa13.44□□□□□ -0.26
SEC13-204ENST00000397099 ENAMQ9NRM1 1142 aa13.44□□□□□ -0.26
SEC13-204ENST00000397099 UTP6Q9NYH9 597 aaKnown RBP13.44□□□□□ -0.26
SEC13-204ENST00000397099 FBXO5Q9UKT4 447 aa13.44□□□□□ -0.26
SEC13-204ENST00000397099 TENM4Q6N022 2769 aa13.43□□□□□ -0.26
SEC13-204ENST00000397099 SNRNP200O75643 2136 aaKnown RBP13.43□□□□□ -0.26
SEC13-204ENST00000397099 SPTBP11277 2137 aa13.43□□□□□ -0.26
SEC13-204ENST00000397099 USP27XA6NNY8 438 aa13.43□□□□□ -0.26
SEC13-204ENST00000397099 NIPSNAP2O75323 286 aa13.43□□□□□ -0.26
SEC13-204ENST00000397099 MPC1LP0DKB6 136 aa13.43□□□□□ -0.26
SEC13-204ENST00000397099 F8A1P23610 371 aa13.43□□□□□ -0.26
SEC13-204ENST00000397099 ARSFP54793 590 aa13.43□□□□□ -0.26
SEC13-204ENST00000397099 KCNC4Q03721 635 aa13.43□□□□□ -0.26
SEC13-204ENST00000397099 GPS2Q13227 327 aa13.43□□□□□ -0.26
SEC13-204ENST00000397099 GRB7Q14451 532 aa13.43□□□□□ -0.26
SEC13-204ENST00000397099 CRYMQ14894 314 aa13.43□□□□□ -0.26
SEC13-204ENST00000397099 SF1Q15637 639 aaKnown RBP13.43□□□□□ -0.26
SEC13-204ENST00000397099 UGT8Q16880 541 aa13.43□□□□□ -0.26
SEC13-204ENST00000397099 DEFB109BQ30KR1 87 aa13.43□□□□□ -0.26
SEC13-204ENST00000397099 ZNF789Q5FWF6 425 aa13.43□□□□□ -0.26
SEC13-204ENST00000397099 RHBDD2Q6NTF9 364 aa13.43□□□□□ -0.26
SEC13-204ENST00000397099 CNSTQ6PJW8 725 aa13.43□□□□□ -0.26
SEC13-204ENST00000397099 KCNMB4Q86W47 210 aa13.43□□□□□ -0.26
SEC13-204ENST00000397099 SYTL1Q8IYJ3 562 aa13.43□□□□□ -0.26
SEC13-204ENST00000397099 DNAJC22Q8N4W6 341 aa13.43□□□□□ -0.26
SEC13-204ENST00000397099 OR9A1PQ8NGU1 263 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms