RNA–Protein interactions for RNA: ENST00000397066.8

CCNF-202, Transcript of cyclin F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNF, Length 4,283 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-202ENST00000397066 IDH2P48735 452 aaKnown RBP14.39□□□□□ -0.11
CCNF-202ENST00000397066 MRPL19P49406 292 aaKnown RBP14.39□□□□□ -0.11
CCNF-202ENST00000397066 PPP5CP53041 499 aa14.39□□□□□ -0.11
CCNF-202ENST00000397066 DEFA1P59665 94 aa14.39□□□□□ -0.11
CCNF-202ENST00000397066 DEFA3P59666 94 aa14.39□□□□□ -0.11
CCNF-202ENST00000397066 DMC1Q14565 340 aa14.39□□□□□ -0.11
CCNF-202ENST00000397066 PCBP2Q15366 365 aaKnown RBP eCLIP14.39□□□□□ -0.11
CCNF-202ENST00000397066 FAM110CQ1W6H9 321 aa14.39□□□□□ -0.11
CCNF-202ENST00000397066 FAM171A1Q5VUB5 890 aa14.39□□□□□ -0.11
CCNF-202ENST00000397066 ATG9BQ674R7 924 aa14.39□□□□□ -0.11
CCNF-202ENST00000397066 GPR153Q6NV75 609 aa14.39□□□□□ -0.11
CCNF-202ENST00000397066 GPR149Q86SP6 731 aa14.39□□□□□ -0.11
CCNF-202ENST00000397066 PANX1Q96RD7 426 aa14.39□□□□□ -0.11
CCNF-202ENST00000397066 PKMYT1Q99640 499 aa14.39□□□□□ -0.11
CCNF-202ENST00000397066 INPP5KQ9BT40 448 aa14.39□□□□□ -0.11
CCNF-202ENST00000397066 NDEL1Q9GZM8 345 aa14.39□□□□□ -0.11
CCNF-202ENST00000397066 ANKMY1Q9P2S6 941 aa14.39□□□□□ -0.11
CCNF-202ENST00000397066 MIA3Q5JRA6 1907 aa14.39□□□□□ -0.11
CCNF-202ENST00000397066 BCKDHAP12694 445 aa14.38□□□□□ -0.11
CCNF-202ENST00000397066 CD40LGP29965 261 aa14.38□□□□□ -0.11
CCNF-202ENST00000397066 RHOAP61586 193 aa14.38□□□□□ -0.11
CCNF-202ENST00000397066 KCNC4Q03721 635 aa14.38□□□□□ -0.11
CCNF-202ENST00000397066 ZNF404Q494X3 552 aa14.38□□□□□ -0.11
CCNF-202ENST00000397066 SHQ1Q6PI26 577 aaKnown RBP14.38□□□□□ -0.11
CCNF-202ENST00000397066 RNF19BQ6ZMZ0 732 aa14.38□□□□□ -0.11
CCNF-202ENST00000397066 NANOGNBQ7Z5D8 188 aa14.38□□□□□ -0.11
CCNF-202ENST00000397066 CYP4Z1Q86W10 505 aa14.38□□□□□ -0.11
CCNF-202ENST00000397066 SERPINA9Q86WD7 417 aa14.38□□□□□ -0.11
CCNF-202ENST00000397066 MAGIXQ9H6Y5 334 aa14.38□□□□□ -0.11
CCNF-202ENST00000397066 ARL15Q9NXU5 204 aa14.38□□□□□ -0.11
CCNF-202ENST00000397066 ABCG2Q9UNQ0 655 aa14.38□□□□□ -0.11
CCNF-202ENST00000397066 DHRS7Q9Y394 339 aa14.38□□□□□ -0.11
CCNF-202ENST00000397066 SLC16A6O15403 523 aa14.38□□□□□ -0.11
CCNF-202ENST00000397066 S100A1P23297 94 aa14.38□□□□□ -0.11
CCNF-202ENST00000397066 NEK2P51955 445 aa14.38□□□□□ -0.11
CCNF-202ENST00000397066 CACNG1Q06432 222 aa14.38□□□□□ -0.11
CCNF-202ENST00000397066 OR6K2Q8NGY2 324 aa14.38□□□□□ -0.11
CCNF-202ENST00000397066 COPS4Q9BT78 406 aa14.38□□□□□ -0.11
CCNF-202ENST00000397066 FLRT1Q9NZU1 646 aa14.38□□□□□ -0.11
CCNF-202ENST00000397066 MYLKQ15746 1914 aa14.38□□□□□ -0.11
CCNF-202ENST00000397066 TRIP12Q14669 1992 aaPredicted RBP14.38□□□□□ -0.11
CCNF-202ENST00000397066 MANBAO00462 879 aa14.38□□□□□ -0.11
CCNF-202ENST00000397066 AXIN1O15169 862 aa14.38□□□□□ -0.11
CCNF-202ENST00000397066 BNIP3LO60238 219 aa14.38□□□□□ -0.11
CCNF-202ENST00000397066 MED26O95402 600 aa14.38□□□□□ -0.11
CCNF-202ENST00000397066 COL6A1P12109 1028 aa14.38□□□□□ -0.11
CCNF-202ENST00000397066 GTF2E2P29084 291 aaKnown RBP14.38□□□□□ -0.11
CCNF-202ENST00000397066 AQP1P29972 269 aa14.38□□□□□ -0.11
CCNF-202ENST00000397066 DDX39BQ13838 428 aaKnown RBP14.38□□□□□ -0.11
CCNF-202ENST00000397066 FXNQ16595 210 aa14.38□□□□□ -0.11
CCNF-202ENST00000397066 RNF219Q5W0B1 726 aaPredicted RBP14.38□□□□□ -0.11
CCNF-202ENST00000397066 MBOAT1Q6ZNC8 495 aa14.38□□□□□ -0.11
CCNF-202ENST00000397066 CEP68Q76N32 757 aa14.38□□□□□ -0.11
CCNF-202ENST00000397066 UTP15Q8TED0 518 aaKnown RBP14.38□□□□□ -0.11
CCNF-202ENST00000397066 APOLD1Q96LR9 279 aa14.38□□□□□ -0.11
CCNF-202ENST00000397066 BARD1Q99728 777 aaKnown RBP14.38□□□□□ -0.11
CCNF-202ENST00000397066 MGME1Q9BQP7 344 aa14.38□□□□□ -0.11
CCNF-202ENST00000397066 ZBTB20Q9HC78 741 aaPredicted RBP14.38□□□□□ -0.11
CCNF-202ENST00000397066 PRDM8Q9NQV8 689 aa14.38□□□□□ -0.11
CCNF-202ENST00000397066 RPS6KA6Q9UK32 745 aa14.38□□□□□ -0.11
CCNF-202ENST00000397066 VPS4AQ9UN37 437 aa14.38□□□□□ -0.11
CCNF-202ENST00000397066 IGLV3-10A0A075B6K4 115 aa14.38□□□□□ -0.11
CCNF-202ENST00000397066 A0A0U1RQF3 1178 aa14.38□□□□□ -0.11
CCNF-202ENST00000397066 DRGXA6NNA5 263 aa14.38□□□□□ -0.11
CCNF-202ENST00000397066 FAM220BPB1ANY3 271 aa14.38□□□□□ -0.11
CCNF-202ENST00000397066 ZNF865P0CJ78 1059 aaPredicted RBP14.38□□□□□ -0.11
CCNF-202ENST00000397066 ITGALP20701 1170 aa14.38□□□□□ -0.11
CCNF-202ENST00000397066 EFNA1P20827 205 aaPredicted RBP14.38□□□□□ -0.11
CCNF-202ENST00000397066 DNAJA1P31689 397 aaKnown RBP14.38□□□□□ -0.11
CCNF-202ENST00000397066 MRPS15P82914 257 aaKnown RBP14.38□□□□□ -0.11
CCNF-202ENST00000397066 CARD16Q5EG05 197 aa14.38□□□□□ -0.11
CCNF-202ENST00000397066 C1QTNF12Q5T7M4 302 aa14.38□□□□□ -0.11
CCNF-202ENST00000397066 ATAD3BQ5T9A4 648 aa14.38□□□□□ -0.11
CCNF-202ENST00000397066 CPZQ66K79 652 aa14.38□□□□□ -0.11
CCNF-202ENST00000397066 ZNF683Q8IZ20 524 aa14.38□□□□□ -0.11
CCNF-202ENST00000397066 STX19Q8N4C7 294 aa14.38□□□□□ -0.11
CCNF-202ENST00000397066 UBE2FQ969M7 185 aa14.38□□□□□ -0.11
CCNF-202ENST00000397066 RHBDF1Q96CC6 855 aa14.38□□□□□ -0.11
CCNF-202ENST00000397066 BCL7BQ9BQE9 202 aa14.38□□□□□ -0.11
CCNF-202ENST00000397066 ACOT13Q9NPJ3 140 aa14.38□□□□□ -0.11
CCNF-202ENST00000397066 AASDHPPTQ9NRN7 309 aa14.38□□□□□ -0.11
CCNF-202ENST00000397066 TMEFF2Q9UIK5 374 aaPredicted RBP14.38□□□□□ -0.11
CCNF-202ENST00000397066 ZNF236Q9UL36 1845 aa14.38□□□□□ -0.11
CCNF-202ENST00000397066 PDCD11Q14690 1871 aaKnown RBP14.37□□□□□ -0.11
CCNF-202ENST00000397066 PRAMEF1O95521 474 aa14.37□□□□□ -0.11
CCNF-202ENST00000397066 TGM1P22735 817 aa14.37□□□□□ -0.11
CCNF-202ENST00000397066 DMPKQ09013 629 aa14.37□□□□□ -0.11
CCNF-202ENST00000397066 CATSPEREQ5SY80 951 aa14.37□□□□□ -0.11
CCNF-202ENST00000397066 VTCN1Q7Z7D3 282 aa14.37□□□□□ -0.11
CCNF-202ENST00000397066 ZNF280BQ86YH2 543 aa14.37□□□□□ -0.11
CCNF-202ENST00000397066 PHF10Q8WUB8 498 aaKnown RBP14.37□□□□□ -0.11
CCNF-202ENST00000397066 TRIB3Q96RU7 358 aa14.37□□□□□ -0.11
CCNF-202ENST00000397066 ITPAQ9BY32 194 aa14.37□□□□□ -0.11
CCNF-202ENST00000397066 FAM8A1Q9UBU6 413 aa14.37□□□□□ -0.11
CCNF-202ENST00000397066 ERVK-11Q9UQG0 969 aa14.37□□□□□ -0.11
CCNF-202ENST00000397066 PCDHB1Q9Y5F3 818 aa14.37□□□□□ -0.11
CCNF-202ENST00000397066 ANKRD28O15084 1053 aa14.37□□□□□ -0.11
CCNF-202ENST00000397066 STK16O75716 305 aa14.37□□□□□ -0.11
CCNF-202ENST00000397066 CLDN9O95484 217 aa14.37□□□□□ -0.11
CCNF-202ENST00000397066 ALPIP09923 528 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms