RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 TMEM71Q6P5X7 295 aa10.25□□□□□ -0.77
NUP98-205ENST00000397007 FAM129CQ86XR2 697 aa10.25□□□□□ -0.77
NUP98-205ENST00000397007 RSC1A1Q92681 617 aa10.25□□□□□ -0.77
NUP98-205ENST00000397007 CCDC138Q96M89 665 aa10.25□□□□□ -0.77
NUP98-205ENST00000397007 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.25□□□□□ -0.77
NUP98-205ENST00000397007 GPAMQ9HCL2 828 aa10.25□□□□□ -0.77
NUP98-205ENST00000397007 SLC6A20Q9NP91 592 aa10.25□□□□□ -0.77
NUP98-205ENST00000397007 GRID1Q9ULK0 1009 aa10.25□□□□□ -0.77
NUP98-205ENST00000397007 DNAJC16Q9Y2G8 782 aa10.25□□□□□ -0.77
NUP98-205ENST00000397007 ENTPD2Q9Y5L3 495 aa10.25□□□□□ -0.77
NUP98-205ENST00000397007 SDK2Q58EX2 2172 aa10.25□□□□□ -0.77
NUP98-205ENST00000397007 STX16-NPEPL1H3BU86 382 aa10.25□□□□□ -0.77
NUP98-205ENST00000397007 E2F3O00716 465 aa10.25□□□□□ -0.77
NUP98-205ENST00000397007 STX16O14662 325 aa10.25□□□□□ -0.77
NUP98-205ENST00000397007 TERTO14746 1132 aaKnown RBP10.25□□□□□ -0.77
NUP98-205ENST00000397007 DXOO77932 396 aaKnown RBP10.25□□□□□ -0.77
NUP98-205ENST00000397007 CCDC166P0CW27 439 aa10.25□□□□□ -0.77
NUP98-205ENST00000397007 HSD17B2P37059 387 aa10.25□□□□□ -0.77
NUP98-205ENST00000397007 TRA2AQ13595 282 aaKnown RBP eCLIP10.25□□□□□ -0.77
NUP98-205ENST00000397007 TMED2Q15363 201 aa10.25□□□□□ -0.77
NUP98-205ENST00000397007 GPATCH11Q8N954 259 aa10.25□□□□□ -0.77
NUP98-205ENST00000397007 ZNF483Q8TF39 744 aaPredicted RBP10.25□□□□□ -0.77
NUP98-205ENST00000397007 KCTD4Q8WVF5 259 aa10.25□□□□□ -0.77
NUP98-205ENST00000397007 SH3KBP1Q96B97 665 aa10.25□□□□□ -0.77
NUP98-205ENST00000397007 TM4SF19Q96DZ7 209 aa10.25□□□□□ -0.77
NUP98-205ENST00000397007 CD180Q99467 661 aa10.25□□□□□ -0.77
NUP98-205ENST00000397007 PPANQ9NQ55 473 aaKnown RBP10.25□□□□□ -0.77
NUP98-205ENST00000397007 HAO1Q9UJM8 370 aa10.25□□□□□ -0.77
NUP98-205ENST00000397007 RUVBL2Q9Y230 463 aaKnown RBP10.25□□□□□ -0.77
NUP98-205ENST00000397007 COLEC10Q9Y6Z7 277 aa10.25□□□□□ -0.77
NUP98-205ENST00000397007 SERTM1A2A2V5 107 aa10.25□□□□□ -0.77
NUP98-205ENST00000397007 OR2A25A4D2G3 310 aa10.25□□□□□ -0.77
NUP98-205ENST00000397007 FITM1A5D6W6 292 aa10.25□□□□□ -0.77
NUP98-205ENST00000397007 SLC16A8O95907 504 aa10.25□□□□□ -0.77
NUP98-205ENST00000397007 NPPBP16860 134 aa10.25□□□□□ -0.77
NUP98-205ENST00000397007 PBLDP30039 288 aaPredicted RBP10.25□□□□□ -0.77
NUP98-205ENST00000397007 SHMT2P34897 504 aa10.25□□□□□ -0.77
NUP98-205ENST00000397007 DUSP3P51452 185 aaPredicted RBP10.25□□□□□ -0.77
NUP98-205ENST00000397007 DNAJB13P59910 316 aa10.25□□□□□ -0.77
NUP98-205ENST00000397007 USP10Q14694 798 aaKnown RBP10.25□□□□□ -0.77
NUP98-205ENST00000397007 TSNQ15631 228 aaKnown RBP10.25□□□□□ -0.77
NUP98-205ENST00000397007 LCTLQ6UWM7 567 aa10.25□□□□□ -0.77
NUP98-205ENST00000397007 EFL1Q7Z2Z2 1120 aaKnown RBP10.25□□□□□ -0.77
NUP98-205ENST00000397007 D2HGDHQ8N465 521 aa10.25□□□□□ -0.77
NUP98-205ENST00000397007 PAF1Q8N7H5 531 aa10.25□□□□□ -0.77
NUP98-205ENST00000397007 DEFB124Q8NES8 71 aa10.25□□□□□ -0.77
NUP98-205ENST00000397007 UBLCP1Q8WVY7 318 aaPredicted RBP10.25□□□□□ -0.77
NUP98-205ENST00000397007 RAB11FIP5Q9BXF6 653 aa10.25□□□□□ -0.77
NUP98-205ENST00000397007 TMEM216Q9P0N5 145 aa10.25□□□□□ -0.77
NUP98-205ENST00000397007 DKK4Q9UBT3 224 aa10.25□□□□□ -0.77
NUP98-205ENST00000397007 ZNF225Q9UK10 706 aa10.25□□□□□ -0.77
NUP98-205ENST00000397007 IQANK1A0A1B0GTG1 560 aa10.24□□□□□ -0.77
NUP98-205ENST00000397007 NPEPPSL1A6NEC2 478 aa10.24□□□□□ -0.77
NUP98-205ENST00000397007 RPIAP49247 311 aa10.24□□□□□ -0.77
NUP98-205ENST00000397007 HNMTP50135 292 aa10.24□□□□□ -0.77
NUP98-205ENST00000397007 KIR2DS3Q14952 304 aa10.24□□□□□ -0.77
NUP98-205ENST00000397007 KIF26BQ2KJY2 2108 aa10.24□□□□□ -0.77
NUP98-205ENST00000397007 AGBL2Q5U5Z8 902 aa10.24□□□□□ -0.77
NUP98-205ENST00000397007 ZNF517Q6ZMY9 492 aaPredicted RBP10.24□□□□□ -0.77
NUP98-205ENST00000397007 KMT5CQ86Y97 462 aa10.24□□□□□ -0.77
NUP98-205ENST00000397007 DNAJC22Q8N4W6 341 aa10.24□□□□□ -0.77
NUP98-205ENST00000397007 RHBDD1Q8TEB9 315 aa10.24□□□□□ -0.77
NUP98-205ENST00000397007 NMRAL1Q9HBL8 299 aa10.24□□□□□ -0.77
NUP98-205ENST00000397007 NUDT4Q9NZJ9 180 aa10.24□□□□□ -0.77
NUP98-205ENST00000397007 ACOT9Q9Y305 439 aa10.24□□□□□ -0.77
NUP98-205ENST00000397007 PLLPQ9Y342 182 aa10.24□□□□□ -0.77
NUP98-205ENST00000397007 MATN2O00339 956 aa10.24□□□□□ -0.77
NUP98-205ENST00000397007 INHBAP08476 426 aa10.24□□□□□ -0.77
NUP98-205ENST00000397007 ARRB2P32121 409 aa10.24□□□□□ -0.77
NUP98-205ENST00000397007 PNLIPRP1P54315 467 aa10.24□□□□□ -0.77
NUP98-205ENST00000397007 TSNAXIP1Q2TAA8 658 aa10.24□□□□□ -0.77
NUP98-205ENST00000397007 MED25Q71SY5 747 aa10.24□□□□□ -0.77
NUP98-205ENST00000397007 ADAMTSL2Q86TH1 951 aa10.24□□□□□ -0.77
NUP98-205ENST00000397007 ATXN7L3BQ96GX2 97 aa10.24□□□□□ -0.77
NUP98-205ENST00000397007 APOPT1Q96IL0 206 aa10.24□□□□□ -0.77
NUP98-205ENST00000397007 AICDAQ9GZX7 198 aa10.24□□□□□ -0.77
NUP98-205ENST00000397007 CFAP20Q9Y6A4 193 aaKnown RBP10.24□□□□□ -0.77
NUP98-205ENST00000397007 PLIN3O60664 434 aa10.23□□□□□ -0.77
NUP98-205ENST00000397007 KRT37O76014 449 aa10.23□□□□□ -0.77
NUP98-205ENST00000397007 E2F1Q01094 437 aa10.23□□□□□ -0.77
NUP98-205ENST00000397007 PCLAFQ15004 111 aa10.23□□□□□ -0.77
NUP98-205ENST00000397007 SEPT7Q16181 437 aaKnown RBP10.23□□□□□ -0.77
NUP98-205ENST00000397007 ANKS6Q68DC2 871 aa10.23□□□□□ -0.77
NUP98-205ENST00000397007 MBOAT1Q6ZNC8 495 aa10.23□□□□□ -0.77
NUP98-205ENST00000397007 AMIGO1Q86WK6 493 aa10.23□□□□□ -0.77
NUP98-205ENST00000397007 PAQR7Q86WK9 346 aa10.23□□□□□ -0.77
NUP98-205ENST00000397007 SEMA6CQ9H3T2 930 aa10.23□□□□□ -0.77
NUP98-205ENST00000397007 EHD1Q9H4M9 534 aa10.23□□□□□ -0.77
NUP98-205ENST00000397007 TMCO1Q9UM00 188 aa10.23□□□□□ -0.77
NUP98-205ENST00000397007 CDRT15L2A8MXV6 281 aa10.23□□□□□ -0.77
NUP98-205ENST00000397007 UGT2B7P16662 529 aa10.23□□□□□ -0.77
NUP98-205ENST00000397007 CD22P20273 847 aa10.23□□□□□ -0.77
NUP98-205ENST00000397007 PDAP1Q13442 181 aaKnown RBP10.23□□□□□ -0.77
NUP98-205ENST00000397007 ZNF385CQ66K41 422 aaPredicted RBP10.23□□□□□ -0.77
NUP98-205ENST00000397007 SPESP1Q6UW49 350 aa10.23□□□□□ -0.77
NUP98-205ENST00000397007 UBE2R2Q712K3 238 aaPredicted RBP10.23□□□□□ -0.77
NUP98-205ENST00000397007 TMPRSS12Q86WS5 348 aa10.23□□□□□ -0.77
NUP98-205ENST00000397007 UHMK1Q8TAS1 419 aaKnown RBP10.23□□□□□ -0.77
NUP98-205ENST00000397007 RAD51AP1Q96B01 352 aa10.23□□□□□ -0.77
NUP98-205ENST00000397007 TRAPPC9Q96Q05 1148 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms