RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 MVB12BQ9H7P6 319 aa19.83■□□□□ 0.76
VCPKMT-202ENST00000395860 ABCF3Q9NUQ8 709 aa19.83■□□□□ 0.76
VCPKMT-202ENST00000395860 INTS7Q9NVH2 962 aaKnown RBP19.83■□□□□ 0.76
VCPKMT-202ENST00000395860 POLG2Q9UHN1 485 aa19.83■□□□□ 0.76
VCPKMT-202ENST00000395860 VILLO15195 856 aa19.82■□□□□ 0.76
VCPKMT-202ENST00000395860 DIAPH2O60879 1101 aa19.82■□□□□ 0.76
VCPKMT-202ENST00000395860 SKAP2O75563 359 aaPredicted RBP19.82■□□□□ 0.76
VCPKMT-202ENST00000395860 EML2O95834 649 aa19.82■□□□□ 0.76
VCPKMT-202ENST00000395860 F3P13726 295 aa19.82■□□□□ 0.76
VCPKMT-202ENST00000395860 CSNK1EP49674 416 aaKnown RBP19.82■□□□□ 0.76
VCPKMT-202ENST00000395860 AFF3P51826 1226 aaKnown RBP19.82■□□□□ 0.76
VCPKMT-202ENST00000395860 FOXA1P55317 472 aa19.82■□□□□ 0.76
VCPKMT-202ENST00000395860 C21orf59P57076 290 aa19.82■□□□□ 0.76
VCPKMT-202ENST00000395860 NXPH1P58417 271 aa19.82■□□□□ 0.76
VCPKMT-202ENST00000395860 KANK2Q63ZY3 851 aa19.82■□□□□ 0.76
VCPKMT-202ENST00000395860 EPGNQ6UW88 154 aa19.82■□□□□ 0.76
VCPKMT-202ENST00000395860 MILR1Q7Z6M3 343 aa19.82■□□□□ 0.76
VCPKMT-202ENST00000395860 TAF8Q7Z7C8 310 aa19.82■□□□□ 0.76
VCPKMT-202ENST00000395860 KLHDC8AQ8IYD2 350 aa19.82■□□□□ 0.76
VCPKMT-202ENST00000395860 OR4F6Q8NGB9 312 aa19.82■□□□□ 0.76
VCPKMT-202ENST00000395860 MAPK15Q8TD08 544 aa19.82■□□□□ 0.76
VCPKMT-202ENST00000395860 PPP1R36Q96LQ0 422 aa19.82■□□□□ 0.76
VCPKMT-202ENST00000395860 RILPQ96NA2 401 aa19.82■□□□□ 0.76
VCPKMT-202ENST00000395860 ZNF225Q9UK10 706 aa19.82■□□□□ 0.76
VCPKMT-202ENST00000395860 COLEC10Q9Y6Z7 277 aa19.82■□□□□ 0.76
VCPKMT-202ENST00000395860 TRPC5OSA6NMA1 111 aa19.81■□□□□ 0.76
VCPKMT-202ENST00000395860 EBAG9O00559 213 aa19.81■□□□□ 0.76
VCPKMT-202ENST00000395860 CSF2P04141 144 aa19.81■□□□□ 0.76
VCPKMT-202ENST00000395860 IDH3AP50213 366 aa19.81■□□□□ 0.76
VCPKMT-202ENST00000395860 ERVPABLB-1P60509 514 aa19.81■□□□□ 0.76
VCPKMT-202ENST00000395860 TBPL1P62380 186 aa19.81■□□□□ 0.76
VCPKMT-202ENST00000395860 TRAF3Q13114 568 aa19.81■□□□□ 0.76
VCPKMT-202ENST00000395860 TSTA3Q13630 321 aaPredicted RBP19.81■□□□□ 0.76
VCPKMT-202ENST00000395860 PRRT3Q5FWE3 981 aa19.81■□□□□ 0.76
VCPKMT-202ENST00000395860 CAPN13Q6MZZ7 669 aaPredicted RBP19.81■□□□□ 0.76
VCPKMT-202ENST00000395860 LETMD1Q6P1Q0 360 aa19.81■□□□□ 0.76
VCPKMT-202ENST00000395860 RAB42Q8N4Z0 105 aa19.81■□□□□ 0.76
VCPKMT-202ENST00000395860 CAMK1GQ96NX5 476 aa19.81■□□□□ 0.76
VCPKMT-202ENST00000395860 IL17FQ96PD4 163 aa19.81■□□□□ 0.76
VCPKMT-202ENST00000395860 NTMT1Q9BV86 223 aa19.81■□□□□ 0.76
VCPKMT-202ENST00000395860 SPATA7Q9P0W8 599 aa19.81■□□□□ 0.76
VCPKMT-202ENST00000395860 TAAR2Q9P1P5 351 aa19.81■□□□□ 0.76
VCPKMT-202ENST00000395860 APOBEC2Q9Y235 224 aaKnown RBP19.81■□□□□ 0.76
VCPKMT-202ENST00000395860 ATXN2Q99700 1313 aaKnown RBP19.81■□□□□ 0.76
VCPKMT-202ENST00000395860 GON4LQ3T8J9 2241 aa19.81■□□□□ 0.76
VCPKMT-202ENST00000395860 SPAG17Q6Q759 2223 aa19.81■□□□□ 0.76
VCPKMT-202ENST00000395860 PCM1Q15154 2024 aa19.8■□□□□ 0.76
VCPKMT-202ENST00000395860 UROSP10746 265 aa19.8■□□□□ 0.76
VCPKMT-202ENST00000395860 NME1P15531 152 aaKnown RBP19.8■□□□□ 0.76
VCPKMT-202ENST00000395860 SERPINB3P29508 390 aa19.8■□□□□ 0.76
VCPKMT-202ENST00000395860 HSD17B2P37059 387 aa19.8■□□□□ 0.76
VCPKMT-202ENST00000395860 CDC16Q13042 620 aa19.8■□□□□ 0.76
VCPKMT-202ENST00000395860 C1orf61Q13536 156 aa19.8■□□□□ 0.76
VCPKMT-202ENST00000395860 ARHGAP19Q14CB8 494 aa19.8■□□□□ 0.76
VCPKMT-202ENST00000395860 TEAD4Q15561 434 aa19.8■□□□□ 0.76
VCPKMT-202ENST00000395860 BMP8AQ7Z5Y6 402 aa19.8■□□□□ 0.76
VCPKMT-202ENST00000395860 CDYL2Q8N8U2 506 aa19.8■□□□□ 0.76
VCPKMT-202ENST00000395860 LRRC61Q9BV99 259 aa19.8■□□□□ 0.76
VCPKMT-202ENST00000395860 A6NCN8 305 aa19.8■□□□□ 0.76
VCPKMT-202ENST00000395860 ZNF839A8K0R7 811 aa19.8■□□□□ 0.76
VCPKMT-202ENST00000395860 E7ENX8 843 aa19.8■□□□□ 0.76
VCPKMT-202ENST00000395860 HRO43593 1189 aa19.8■□□□□ 0.76
VCPKMT-202ENST00000395860 KDM1AO60341 852 aa19.8■□□□□ 0.76
VCPKMT-202ENST00000395860 JUNP05412 331 aaKnown RBP19.8■□□□□ 0.76
VCPKMT-202ENST00000395860 CELA2BP08218 269 aaPredicted RBP19.8■□□□□ 0.76
VCPKMT-202ENST00000395860 EBLN1P0CF75 366 aa19.8■□□□□ 0.76
VCPKMT-202ENST00000395860 EPORP19235 508 aa19.8■□□□□ 0.76
VCPKMT-202ENST00000395860 TAP2Q03519 686 aa19.8■□□□□ 0.76
VCPKMT-202ENST00000395860 BTKQ06187 659 aa19.8■□□□□ 0.76
VCPKMT-202ENST00000395860 FASTKQ14296 549 aaKnown RBP19.8■□□□□ 0.76
VCPKMT-202ENST00000395860 UGT3A2Q3SY77 523 aa19.8■□□□□ 0.76
VCPKMT-202ENST00000395860 SLC9B1Q4ZJI4 515 aa19.8■□□□□ 0.76
VCPKMT-202ENST00000395860 FAM219BQ5XKK7 198 aa19.8■□□□□ 0.76
VCPKMT-202ENST00000395860 FOXR1Q6PIV2 292 aa19.8■□□□□ 0.76
VCPKMT-202ENST00000395860 LRRC56Q8IYG6 542 aaPredicted RBP19.8■□□□□ 0.76
VCPKMT-202ENST00000395860 TWIST2Q8WVJ9 160 aa19.8■□□□□ 0.76
VCPKMT-202ENST00000395860 CXorf40BQ96DE9 158 aa19.8■□□□□ 0.76
VCPKMT-202ENST00000395860 ACTR8Q9H981 624 aa19.8■□□□□ 0.76
VCPKMT-202ENST00000395860 CCDC177Q9NQR7 707 aaPredicted RBP19.8■□□□□ 0.76
VCPKMT-202ENST00000395860 HEY2Q9UBP5 337 aa19.8■□□□□ 0.76
VCPKMT-202ENST00000395860 TIMM22Q9Y584 194 aa19.8■□□□□ 0.76
VCPKMT-202ENST00000395860 DNAJC15Q9Y5T4 150 aa19.8■□□□□ 0.76
VCPKMT-202ENST00000395860 ARHGEF17Q96PE2 2063 aaPredicted RBP19.8■□□□□ 0.76
VCPKMT-202ENST00000395860 TRBV23OR9-2A0A075B6M9 112 aa19.79■□□□□ 0.76
VCPKMT-202ENST00000395860 ERICH4A6NGS2 130 aa19.79■□□□□ 0.76
VCPKMT-202ENST00000395860 HGSO14964 777 aaPredicted RBP19.79■□□□□ 0.76
VCPKMT-202ENST00000395860 DCTN3O75935 186 aa19.79■□□□□ 0.76
VCPKMT-202ENST00000395860 CLDN9O95484 217 aa19.79■□□□□ 0.76
VCPKMT-202ENST00000395860 CHEK2O96017 543 aa19.79■□□□□ 0.76
VCPKMT-202ENST00000395860 ENO1P06733 434 aaKnown RBP19.79■□□□□ 0.76
VCPKMT-202ENST00000395860 ERGP11308 486 aa19.79■□□□□ 0.76
VCPKMT-202ENST00000395860 HGFP14210 728 aa19.79■□□□□ 0.76
VCPKMT-202ENST00000395860 GNSP15586 552 aa19.79■□□□□ 0.76
VCPKMT-202ENST00000395860 NDUFS1P28331 727 aa19.79■□□□□ 0.76
VCPKMT-202ENST00000395860 ZSCAN26Q16670 478 aa19.79■□□□□ 0.76
VCPKMT-202ENST00000395860 PLK5Q496M5 336 aa19.79■□□□□ 0.76
VCPKMT-202ENST00000395860 SUSD1Q6UWL2 747 aa19.79■□□□□ 0.76
VCPKMT-202ENST00000395860 ZNF771Q7L3S4 317 aaPredicted RBP19.79■□□□□ 0.76
VCPKMT-202ENST00000395860 EFL1Q7Z2Z2 1120 aaKnown RBP19.79■□□□□ 0.76
VCPKMT-202ENST00000395860 MYLK4Q86YV6 388 aaPredicted RBP19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms