RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 LACRTQ9GZZ8 138 aa13.17□□□□□ -0.3
USP49-203ENST00000394253 POLR2J3Q9H1A7 115 aaKnown RBP13.17□□□□□ -0.3
USP49-203ENST00000394253 HTR3EA5X5Y0 456 aa13.17□□□□□ -0.3
USP49-203ENST00000394253 SULT2A1Q06520 285 aa13.17□□□□□ -0.3
USP49-203ENST00000394253 FAM43BQ6ZT52 329 aaPredicted RBP13.17□□□□□ -0.3
USP49-203ENST00000394253 SLC22A15Q8IZD6 547 aa13.17□□□□□ -0.3
USP49-203ENST00000394253 GADD45GO95257 159 aa13.17□□□□□ -0.3
USP49-203ENST00000394253 UCHL1P09936 223 aa13.17□□□□□ -0.3
USP49-203ENST00000394253 ELFN1P0C7U0 828 aa13.17□□□□□ -0.3
USP49-203ENST00000394253 EXOC3L2Q2M3D2 409 aa13.17□□□□□ -0.3
USP49-203ENST00000394253 DPY19L1Q2PZI1 675 aa13.17□□□□□ -0.3
USP49-203ENST00000394253 CHRFAM7AQ494W8 412 aa13.17□□□□□ -0.3
USP49-203ENST00000394253 POMZP3Q6PJE2 187 aa13.17□□□□□ -0.3
USP49-203ENST00000394253 PACRGLQ8N7B6 248 aa13.17□□□□□ -0.3
USP49-203ENST00000394253 TAS2R9Q9NYW1 312 aa13.17□□□□□ -0.3
USP49-203ENST00000394253 ZNF521Q96K83 1311 aa13.17□□□□□ -0.3
USP49-203ENST00000394253 CAPN14A8MX76 684 aa13.17□□□□□ -0.3
USP49-203ENST00000394253 E7EQ34 232 aa13.17□□□□□ -0.3
USP49-203ENST00000394253 ATP6AP2O75787 350 aa13.17□□□□□ -0.3
USP49-203ENST00000394253 FABP6P51161 128 aa13.17□□□□□ -0.3
USP49-203ENST00000394253 CLCN2P51788 898 aa13.17□□□□□ -0.3
USP49-203ENST00000394253 POGLUT1Q8NBL1 392 aa13.17□□□□□ -0.3
USP49-203ENST00000394253 C22orf15Q8WYQ4 148 aa13.17□□□□□ -0.3
USP49-203ENST00000394253 B3GAT2Q9NPZ5 323 aa13.17□□□□□ -0.3
USP49-203ENST00000394253 XPNPEP2O43895 674 aa13.17□□□□□ -0.3
USP49-203ENST00000394253 HLA-DPB1P04440 258 aa13.17□□□□□ -0.3
USP49-203ENST00000394253 SREBF2Q12772 1141 aa13.17□□□□□ -0.3
USP49-203ENST00000394253 GTF2H5Q6ZYL4 71 aa13.17□□□□□ -0.3
USP49-203ENST00000394253 WDR53Q7Z5U6 358 aaPredicted RBP13.17□□□□□ -0.3
USP49-203ENST00000394253 RBM12BQ8IXT5 1001 aaKnown RBP13.17□□□□□ -0.3
USP49-203ENST00000394253 C7orf34Q96L11 122 aa13.17□□□□□ -0.3
USP49-203ENST00000394253 MED14O60244 1454 aa13.17□□□□□ -0.3
USP49-203ENST00000394253 AHSA1O95433 338 aa13.17□□□□□ -0.3
USP49-203ENST00000394253 CLCN4P51793 760 aa13.17□□□□□ -0.3
USP49-203ENST00000394253 RAB41Q5JT25 222 aa13.17□□□□□ -0.3
USP49-203ENST00000394253 ZNF584Q8IVC4 421 aa13.17□□□□□ -0.3
USP49-203ENST00000394253 UNC5BQ8IZJ1 945 aa13.17□□□□□ -0.3
USP49-203ENST00000394253 TMEM86AQ8N2M4 240 aa13.17□□□□□ -0.3
USP49-203ENST00000394253 DAGLBQ8NCG7 672 aa13.17□□□□□ -0.3
USP49-203ENST00000394253 GEMIN6Q8WXD5 167 aaKnown RBP13.17□□□□□ -0.3
USP49-203ENST00000394253 RNF121Q9H920 327 aa13.17□□□□□ -0.3
USP49-203ENST00000394253 FOLH1BQ9HBA9 442 aa13.17□□□□□ -0.3
USP49-203ENST00000394253 SLCO1B3Q9NPD5 702 aa13.17□□□□□ -0.3
USP49-203ENST00000394253 ERVK-18Q9QC07 812 aa13.17□□□□□ -0.3
USP49-203ENST00000394253 TRIP12Q14669 1992 aaPredicted RBP13.17□□□□□ -0.3
USP49-203ENST00000394253 PXDNLA1KZ92 1463 aa13.17□□□□□ -0.3
USP49-203ENST00000394253 TRAV19A0A0A6YYK7 116 aa13.17□□□□□ -0.3
USP49-203ENST00000394253 SHBGP04278 402 aa13.17□□□□□ -0.3
USP49-203ENST00000394253 ALDH2P05091 517 aa13.17□□□□□ -0.3
USP49-203ENST00000394253 USP17L7P0C7H9 530 aa13.17□□□□□ -0.3
USP49-203ENST00000394253 KELP23276 732 aa13.17□□□□□ -0.3
USP49-203ENST00000394253 KCNIP4Q6PIL6 250 aa13.17□□□□□ -0.3
USP49-203ENST00000394253 SMIM15Q7Z3B0 74 aa13.17□□□□□ -0.3
USP49-203ENST00000394253 FTMTQ8N4E7 242 aa13.17□□□□□ -0.3
USP49-203ENST00000394253 BEST4Q8NFU0 473 aa13.17□□□□□ -0.3
USP49-203ENST00000394253 FAM86C1Q9NVL1 165 aa13.17□□□□□ -0.3
USP49-203ENST00000394253 PCDHB1Q9Y5F3 818 aa13.17□□□□□ -0.3
USP49-203ENST00000394253 DCDC2CA8MYV0 355 aa13.16□□□□□ -0.3
USP49-203ENST00000394253 EEF1A2Q05639 463 aaKnown RBP13.16□□□□□ -0.3
USP49-203ENST00000394253 RNF151Q2KHN1 245 aa13.16□□□□□ -0.3
USP49-203ENST00000394253 REP15Q6BDI9 236 aa13.16□□□□□ -0.3
USP49-203ENST00000394253 C3P1Q6ZMU1 363 aa13.16□□□□□ -0.3
USP49-203ENST00000394253 RALGPS2Q86X27 583 aaPredicted RBP13.16□□□□□ -0.3
USP49-203ENST00000394253 TLR10Q9BXR5 811 aa13.16□□□□□ -0.3
USP49-203ENST00000394253 CYP8B1Q9UNU6 501 aa13.16□□□□□ -0.3
USP49-203ENST00000394253 CD6P30203 668 aa13.16□□□□□ -0.3
USP49-203ENST00000394253 EEF1A1P68104 462 aaKnown RBP13.16□□□□□ -0.3
USP49-203ENST00000394253 SPATS1Q496A3 300 aa13.16□□□□□ -0.3
USP49-203ENST00000394253 CRB2Q5IJ48 1285 aa13.16□□□□□ -0.3
USP49-203ENST00000394253 EEF1A1P5Q5VTE0 462 aa13.16□□□□□ -0.3
USP49-203ENST00000394253 GAD1Q99259 594 aa13.16□□□□□ -0.3
USP49-203ENST00000394253 QPCTLQ9NXS2 382 aa13.16□□□□□ -0.3
USP49-203ENST00000394253 GXYLT2A0PJZ3 443 aa13.16□□□□□ -0.3
USP49-203ENST00000394253 ANGPTL7O43827 346 aa13.16□□□□□ -0.3
USP49-203ENST00000394253 RAD51DO75771 328 aa13.16□□□□□ -0.3
USP49-203ENST00000394253 PSMD10O75832 226 aa13.16□□□□□ -0.3
USP49-203ENST00000394253 SLC7A1P30825 629 aa13.16□□□□□ -0.3
USP49-203ENST00000394253 ZNF404Q494X3 552 aa13.16□□□□□ -0.3
USP49-203ENST00000394253 ANKRD52Q8NB46 1076 aa13.16□□□□□ -0.3
USP49-203ENST00000394253 IGDCC4Q8TDY8 1250 aa13.16□□□□□ -0.3
USP49-203ENST00000394253 TCRBV9S1A1TA0A576 114 aa13.16□□□□□ -0.3
USP49-203ENST00000394253 SCAMP1O15126 338 aa13.16□□□□□ -0.3
USP49-203ENST00000394253 SLC25A14O95258 325 aaPredicted RBP13.16□□□□□ -0.3
USP49-203ENST00000394253 RHOP08100 348 aa13.16□□□□□ -0.3
USP49-203ENST00000394253 S100A7P31151 101 aa13.16□□□□□ -0.3
USP49-203ENST00000394253 PRKAR1BP31321 381 aa13.16□□□□□ -0.3
USP49-203ENST00000394253 CCKBRP32239 447 aa13.16□□□□□ -0.3
USP49-203ENST00000394253 MSX2P35548 267 aaPredicted RBP13.16□□□□□ -0.3
USP49-203ENST00000394253 IFI44LQ53G44 452 aa13.16□□□□□ -0.3
USP49-203ENST00000394253 CRTC1Q6UUV9 634 aa13.16□□□□□ -0.3
USP49-203ENST00000394253 GPR149Q86SP6 731 aa13.16□□□□□ -0.3
USP49-203ENST00000394253 BTF3L4Q96K17 158 aa13.16□□□□□ -0.3
USP49-203ENST00000394253 PRMT6Q96LA8 375 aaPredicted RBP13.16□□□□□ -0.3
USP49-203ENST00000394253 SPTBN1Q01082 2364 aaKnown RBP13.16□□□□□ -0.3
USP49-203ENST00000394253 FAM149AA5PLN7 773 aa13.16□□□□□ -0.3
USP49-203ENST00000394253 ANXA8P13928 327 aa13.16□□□□□ -0.3
USP49-203ENST00000394253 CAMLGP49069 296 aa13.16□□□□□ -0.3
USP49-203ENST00000394253 LRRC38Q5VT99 294 aa13.16□□□□□ -0.3
USP49-203ENST00000394253 C16orf86Q6ZW13 317 aa13.16□□□□□ -0.3
USP49-203ENST00000394253 FERD3LQ96RJ6 166 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms