RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 SIX5Q8N196 739 aa8.4□□□□□ -1.06
TDP1-203ENST00000393454 FNDC5Q8NAU1 212 aa8.4□□□□□ -1.06
TDP1-203ENST00000393454 FBXO15Q8NCQ5 510 aaPredicted RBP8.4□□□□□ -1.06
TDP1-203ENST00000393454 DENND6BQ8NEG7 585 aa8.4□□□□□ -1.06
TDP1-203ENST00000393454 OR5AR1Q8NGP9 310 aa8.4□□□□□ -1.06
TDP1-203ENST00000393454 RP9Q8TA86 221 aaKnown RBP8.4□□□□□ -1.06
TDP1-203ENST00000393454 TOE1Q96GM8 510 aaKnown RBP8.4□□□□□ -1.06
TDP1-203ENST00000393454 UHRF1Q96T88 793 aaPredicted RBP8.4□□□□□ -1.06
TDP1-203ENST00000393454 RTKNQ9BST9 563 aa8.4□□□□□ -1.06
TDP1-203ENST00000393454 C1orf50Q9BV19 199 aa8.4□□□□□ -1.06
TDP1-203ENST00000393454 SLC29A3Q9BZD2 475 aa8.4□□□□□ -1.06
TDP1-203ENST00000393454 ELOVL6Q9H5J4 265 aa8.4□□□□□ -1.06
TDP1-203ENST00000393454 C6orf106Q9H6K1 298 aaPredicted RBP8.4□□□□□ -1.06
TDP1-203ENST00000393454 RMI1Q9H9A7 625 aa8.4□□□□□ -1.06
TDP1-203ENST00000393454 CARS2Q9HA77 564 aaKnown RBP8.4□□□□□ -1.06
TDP1-203ENST00000393454 LTB4R2Q9NPC1 389 aa8.4□□□□□ -1.06
TDP1-203ENST00000393454 C2orf42Q9NWW7 574 aa8.4□□□□□ -1.06
TDP1-203ENST00000393454 CCDC167Q9P0B6 97 aa8.4□□□□□ -1.06
TDP1-203ENST00000393454 USP36Q9P275 1121 aaKnown RBP8.4□□□□□ -1.06
TDP1-203ENST00000393454 ACSL5Q9ULC5 683 aa8.4□□□□□ -1.06
TDP1-203ENST00000393454 ZNF490Q9ULM2 529 aaPredicted RBP8.4□□□□□ -1.06
TDP1-203ENST00000393454 PLAGL1Q9UM63 463 aa8.4□□□□□ -1.06
TDP1-203ENST00000393454 KCNK6Q9Y257 313 aa8.4□□□□□ -1.06
TDP1-203ENST00000393454 SLC17A4Q9Y2C5 497 aa8.4□□□□□ -1.06
TDP1-203ENST00000393454 KLHL33A6NCF5 533 aa8.39□□□□□ -1.07
TDP1-203ENST00000393454 CHURC1-FNTBB4DL54 471 aa8.39□□□□□ -1.07
TDP1-203ENST00000393454 SLC28A1O00337 649 aa8.39□□□□□ -1.07
TDP1-203ENST00000393454 RGS14O43566 566 aa8.39□□□□□ -1.07
TDP1-203ENST00000393454 RPN2P04844 631 aa8.39□□□□□ -1.07
TDP1-203ENST00000393454 C7P10643 843 aa8.39□□□□□ -1.07
TDP1-203ENST00000393454 THOP1P52888 689 aa8.39□□□□□ -1.07
TDP1-203ENST00000393454 HERC3Q15034 1050 aa8.39□□□□□ -1.07
TDP1-203ENST00000393454 MAPRE2Q15555 327 aa8.39□□□□□ -1.07
TDP1-203ENST00000393454 TCEA2Q15560 299 aa8.39□□□□□ -1.07
TDP1-203ENST00000393454 MMEL1Q495T6 779 aa8.39□□□□□ -1.07
TDP1-203ENST00000393454 PYCR3Q53H96 274 aa8.39□□□□□ -1.07
TDP1-203ENST00000393454 THEMIS2Q5TEJ8 643 aa8.39□□□□□ -1.07
TDP1-203ENST00000393454 FBXW10Q5XX13 1052 aa8.39□□□□□ -1.07
TDP1-203ENST00000393454 CAPN13Q6MZZ7 669 aaPredicted RBP8.39□□□□□ -1.07
TDP1-203ENST00000393454 PAOXQ6QHF9 649 aa8.39□□□□□ -1.07
TDP1-203ENST00000393454 ADHFE1Q8IWW8 467 aa8.39□□□□□ -1.07
TDP1-203ENST00000393454 ARHGAP24Q8N264 748 aa8.39□□□□□ -1.07
TDP1-203ENST00000393454 MIER2Q8N344 545 aa8.39□□□□□ -1.07
TDP1-203ENST00000393454 SFRP1Q8N474 314 aa8.39□□□□□ -1.07
TDP1-203ENST00000393454 CHCHD4Q8N4Q1 142 aa8.39□□□□□ -1.07
TDP1-203ENST00000393454 LMNTD1Q8N9Z9 388 aa8.39□□□□□ -1.07
TDP1-203ENST00000393454 OR56A3Q8NH54 315 aa8.39□□□□□ -1.07
TDP1-203ENST00000393454 ZNF480Q8WV37 535 aa8.39□□□□□ -1.07
TDP1-203ENST00000393454 SELENOMQ8WWX9 145 aa8.39□□□□□ -1.07
TDP1-203ENST00000393454 UTP4Q969X6 686 aaKnown RBP8.39□□□□□ -1.07
TDP1-203ENST00000393454 RAD51AP1Q96B01 352 aa8.39□□□□□ -1.07
TDP1-203ENST00000393454 FERD3LQ96RJ6 166 aa8.39□□□□□ -1.07
TDP1-203ENST00000393454 TIMM29Q9BSF4 260 aa8.39□□□□□ -1.07
TDP1-203ENST00000393454 THTPAQ9BU02 230 aa8.39□□□□□ -1.07
TDP1-203ENST00000393454 FGF22Q9HCT0 170 aa8.39□□□□□ -1.07
TDP1-203ENST00000393454 FARSBQ9NSD9 589 aaKnown RBP8.39□□□□□ -1.07
TDP1-203ENST00000393454 WNT16Q9UBV4 365 aa8.39□□□□□ -1.07
TDP1-203ENST00000393454 PRDM4Q9UKN5 801 aa8.39□□□□□ -1.07
TDP1-203ENST00000393454 SNX6Q9UNH7 406 aa8.39□□□□□ -1.07
TDP1-203ENST00000393454 ST14Q9Y5Y6 855 aa8.39□□□□□ -1.07
TDP1-203ENST00000393454 PRSS38A1L453 326 aa8.39□□□□□ -1.07
TDP1-203ENST00000393454 PDZK1P1A8MUH7 402 aa8.39□□□□□ -1.07
TDP1-203ENST00000393454 SLC2A4P14672 509 aa8.39□□□□□ -1.07
TDP1-203ENST00000393454 IDO1P14902 403 aa8.39□□□□□ -1.07
TDP1-203ENST00000393454 IDSP22304 550 aa8.39□□□□□ -1.07
TDP1-203ENST00000393454 KELP23276 732 aa8.39□□□□□ -1.07
TDP1-203ENST00000393454 HTR1BP28222 390 aa8.39□□□□□ -1.07
TDP1-203ENST00000393454 OXTRP30559 389 aa8.39□□□□□ -1.07
TDP1-203ENST00000393454 NUDT2P50583 147 aa8.39□□□□□ -1.07
TDP1-203ENST00000393454 ATP4BP51164 291 aa8.39□□□□□ -1.07
TDP1-203ENST00000393454 NEK2P51955 445 aa8.39□□□□□ -1.07
TDP1-203ENST00000393454 PNLIPRP1P54315 467 aa8.39□□□□□ -1.07
TDP1-203ENST00000393454 DIO3P55073 304 aa8.39□□□□□ -1.07
TDP1-203ENST00000393454 KIAA1024LP59773 190 aa8.39□□□□□ -1.07
TDP1-203ENST00000393454 ART3Q13508 389 aa8.39□□□□□ -1.07
TDP1-203ENST00000393454 GAS6Q14393 721 aa8.39□□□□□ -1.07
TDP1-203ENST00000393454 KRT33BQ14525 404 aa8.39□□□□□ -1.07
TDP1-203ENST00000393454 NFATC4Q14934 902 aa8.39□□□□□ -1.07
TDP1-203ENST00000393454 AP5B1Q2VPB7 878 aa8.39□□□□□ -1.07
TDP1-203ENST00000393454 HABP4Q5JVS0 413 aaKnown RBP8.39□□□□□ -1.07
TDP1-203ENST00000393454 C6orf136Q5SQH8 315 aa8.39□□□□□ -1.07
TDP1-203ENST00000393454 GPR153Q6NV75 609 aa8.39□□□□□ -1.07
TDP1-203ENST00000393454 Q6ZSR9 355 aa8.39□□□□□ -1.07
TDP1-203ENST00000393454 DCUN1D3Q8IWE4 304 aa8.39□□□□□ -1.07
TDP1-203ENST00000393454 ZNF687Q8N1G0 1237 aa8.39□□□□□ -1.07
TDP1-203ENST00000393454 C2orf73Q8N5S3 287 aaPredicted RBP8.39□□□□□ -1.07
TDP1-203ENST00000393454 OR9I1Q8NGQ6 314 aa8.39□□□□□ -1.07
TDP1-203ENST00000393454 RLN3Q8WXF3 142 aa8.39□□□□□ -1.07
TDP1-203ENST00000393454 SNX19Q92543 992 aa8.39□□□□□ -1.07
TDP1-203ENST00000393454 RCN3Q96D15 328 aa8.39□□□□□ -1.07
TDP1-203ENST00000393454 BMFQ96LC9 184 aa8.39□□□□□ -1.07
TDP1-203ENST00000393454 MAGEB10Q96LZ2 347 aaPredicted RBP8.39□□□□□ -1.07
TDP1-203ENST00000393454 C12orf66Q96MD2 445 aa8.39□□□□□ -1.07
TDP1-203ENST00000393454 WDR92Q96MX6 357 aa8.39□□□□□ -1.07
TDP1-203ENST00000393454 IL17FQ96PD4 163 aa8.39□□□□□ -1.07
TDP1-203ENST00000393454 GPR174Q9BXC1 333 aa8.39□□□□□ -1.07
TDP1-203ENST00000393454 MRPL1Q9BYD6 325 aaKnown RBP8.39□□□□□ -1.07
TDP1-203ENST00000393454 TPSD1Q9BZJ3 242 aa8.39□□□□□ -1.07
TDP1-203ENST00000393454 C1orf21Q9H246 121 aa8.39□□□□□ -1.07
TDP1-203ENST00000393454 TRIT1Q9H3H1 467 aaKnown RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms