RNA–Protein interactions for RNA: ENST00000392542.6

RFC5-201, Transcript of replication factor C subunit 5, humanhuman

TSL 2 BASIC

Gene RFC5, Length 2,449 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-201ENST00000392542 CNDP2Q96KP4 475 aaKnown RBP12□□□□□ -0.49
RFC5-201ENST00000392542 RMND5AQ9H871 391 aa12□□□□□ -0.49
RFC5-201ENST00000392542 SMURF2Q9HAU4 748 aa12□□□□□ -0.49
RFC5-201ENST00000392542 HS3ST2Q9Y278 367 aa12□□□□□ -0.49
RFC5-201ENST00000392542 TRAV19A0A0A6YYK7 116 aa11.99□□□□□ -0.49
RFC5-201ENST00000392542 H3BMQ9 156 aa11.99□□□□□ -0.49
RFC5-201ENST00000392542 GNGT2O14610 69 aa11.99□□□□□ -0.49
RFC5-201ENST00000392542 ATE1O95260 518 aa11.99□□□□□ -0.49
RFC5-201ENST00000392542 HIST1H2AGP0C0S8 130 aaPredicted RBP11.99□□□□□ -0.49
RFC5-201ENST00000392542 JUNBP17275 347 aaPredicted RBP11.99□□□□□ -0.49
RFC5-201ENST00000392542 IL1RNP18510 177 aa11.99□□□□□ -0.49
RFC5-201ENST00000392542 LAG3P18627 525 aa11.99□□□□□ -0.49
RFC5-201ENST00000392542 HIST1H2ADP20671 130 aa11.99□□□□□ -0.49
RFC5-201ENST00000392542 MAPK1P28482 360 aa11.99□□□□□ -0.49
RFC5-201ENST00000392542 HSPA14Q0VDF9 509 aa11.99□□□□□ -0.49
RFC5-201ENST00000392542 LAPTM5Q13571 262 aa11.99□□□□□ -0.49
RFC5-201ENST00000392542 BOP1Q14137 746 aaKnown RBP11.99□□□□□ -0.49
RFC5-201ENST00000392542 NEDD8Q15843 81 aa11.99□□□□□ -0.49
RFC5-201ENST00000392542 ZDHHC20Q5W0Z9 365 aa11.99□□□□□ -0.49
RFC5-201ENST00000392542 FAM117BQ6P1L5 589 aa11.99□□□□□ -0.49
RFC5-201ENST00000392542 TMEM26Q6ZUK4 368 aa11.99□□□□□ -0.49
RFC5-201ENST00000392542 TMCO2Q7Z6W1 182 aaPredicted RBP11.99□□□□□ -0.49
RFC5-201ENST00000392542 CMTM8Q8IZV2 173 aa11.99□□□□□ -0.49
RFC5-201ENST00000392542 C8orf59Q8N0T1 100 aaPredicted RBP11.99□□□□□ -0.49
RFC5-201ENST00000392542 BEND7Q8N7W2 519 aaPredicted RBP11.99□□□□□ -0.49
RFC5-201ENST00000392542 L3MBTL4Q8NA19 623 aa11.99□□□□□ -0.49
RFC5-201ENST00000392542 ASB11Q8WXH4 323 aa11.99□□□□□ -0.49
RFC5-201ENST00000392542 HIST1H2AHQ96KK5 128 aa11.99□□□□□ -0.49
RFC5-201ENST00000392542 COG8Q96MW5 612 aa11.99□□□□□ -0.49
RFC5-201ENST00000392542 MBOAT4Q96T53 435 aa11.99□□□□□ -0.49
RFC5-201ENST00000392542 HIST1H2AJQ99878 128 aa11.99□□□□□ -0.49
RFC5-201ENST00000392542 RBM4BQ9BQ04 359 aaKnown RBP11.99□□□□□ -0.49
RFC5-201ENST00000392542 H2AFJQ9BTM1 129 aa11.99□□□□□ -0.49
RFC5-201ENST00000392542 RBM4Q9BWF3 364 aaKnown RBP11.99□□□□□ -0.49
RFC5-201ENST00000392542 CPEB1Q9BZB8 566 aaKnown RBP11.99□□□□□ -0.49
RFC5-201ENST00000392542 ZDHHC6Q9H6R6 413 aa11.99□□□□□ -0.49
RFC5-201ENST00000392542 HPS4Q9NQG7 708 aa11.99□□□□□ -0.49
RFC5-201ENST00000392542 FAM118AQ9NWS6 357 aa11.99□□□□□ -0.49
RFC5-201ENST00000392542 PABPN1LA6NDY0 278 aaKnown RBP11.99□□□□□ -0.49
RFC5-201ENST00000392542 NPIPB8E9PQR5 432 aa11.99□□□□□ -0.49
RFC5-201ENST00000392542 LEFTY2O00292 366 aa11.99□□□□□ -0.49
RFC5-201ENST00000392542 PCSK2P16519 638 aa11.99□□□□□ -0.49
RFC5-201ENST00000392542 EEF1B2P24534 225 aaKnown RBP11.99□□□□□ -0.49
RFC5-201ENST00000392542 POLR2IP36954 125 aaKnown RBP11.99□□□□□ -0.49
RFC5-201ENST00000392542 SPINT3P49223 89 aa11.99□□□□□ -0.49
RFC5-201ENST00000392542 HNMTP50135 292 aa11.99□□□□□ -0.49
RFC5-201ENST00000392542 NEK2P51955 445 aa11.99□□□□□ -0.49
RFC5-201ENST00000392542 GRSF1Q12849 480 aaKnown RBP eCLIP11.99□□□□□ -0.49
RFC5-201ENST00000392542 SP140Q13342 867 aa11.99□□□□□ -0.49
RFC5-201ENST00000392542 DEFB115Q30KQ5 88 aa11.99□□□□□ -0.49
RFC5-201ENST00000392542 SLC44A4Q53GD3 710 aa11.99□□□□□ -0.49
RFC5-201ENST00000392542 CARD16Q5EG05 197 aa11.99□□□□□ -0.49
RFC5-201ENST00000392542 PLEKHS1Q5SXH7 462 aa11.99□□□□□ -0.49
RFC5-201ENST00000392542 BROXQ5VW32 411 aa11.99□□□□□ -0.49
RFC5-201ENST00000392542 NEK5Q6P3R8 708 aa11.99□□□□□ -0.49
RFC5-201ENST00000392542 ANKRD33Q7Z3H0 272 aa11.99□□□□□ -0.49
RFC5-201ENST00000392542 ADHFE1Q8IWW8 467 aa11.99□□□□□ -0.49
RFC5-201ENST00000392542 C10orf111Q8N326 155 aa11.99□□□□□ -0.49
RFC5-201ENST00000392542 ZNF555Q8NEP9 628 aa11.99□□□□□ -0.49
RFC5-201ENST00000392542 OR5K1Q8NHB7 308 aa11.99□□□□□ -0.49
RFC5-201ENST00000392542 SKA2Q8WVK7 121 aaPredicted RBP11.99□□□□□ -0.49
RFC5-201ENST00000392542 POP5Q969H6 163 aaKnown RBP11.99□□□□□ -0.49
RFC5-201ENST00000392542 TESCQ96BS2 214 aa11.99□□□□□ -0.49
RFC5-201ENST00000392542 TSSK3Q96PN8 268 aa11.99□□□□□ -0.49
RFC5-201ENST00000392542 INPP5KQ9BT40 448 aa11.99□□□□□ -0.49
RFC5-201ENST00000392542 DCUN1D5Q9BTE7 237 aa11.99□□□□□ -0.49
RFC5-201ENST00000392542 RC3H2Q9HBD1 1191 aaKnown RBP11.99□□□□□ -0.49
RFC5-201ENST00000392542 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.99□□□□□ -0.49
RFC5-201ENST00000392542 TMEM9Q9P0T7 183 aa11.99□□□□□ -0.49
RFC5-201ENST00000392542 B4GALT6Q9UBX8 382 aa11.99□□□□□ -0.49
RFC5-201ENST00000392542 CIDEBQ9UHD4 219 aa11.99□□□□□ -0.49
RFC5-201ENST00000392542 TMPRSS11EQ9UL52 423 aa11.99□□□□□ -0.49
RFC5-201ENST00000392542 PPT2Q9UMR5 302 aa11.99□□□□□ -0.49
RFC5-201ENST00000392542 TMED5Q9Y3A6 229 aa11.99□□□□□ -0.49
RFC5-201ENST00000392542 NRG2O14511 850 aaPredicted RBP11.98□□□□□ -0.49
RFC5-201ENST00000392542 WNT9AO14904 365 aa11.98□□□□□ -0.49
RFC5-201ENST00000392542 SLC16A5O15375 505 aa11.98□□□□□ -0.49
RFC5-201ENST00000392542 B4GAT1O43505 415 aa11.98□□□□□ -0.49
RFC5-201ENST00000392542 NOBOXO60393 691 aa11.98□□□□□ -0.49
RFC5-201ENST00000392542 SERPINA1P01009 418 aa11.98□□□□□ -0.49
RFC5-201ENST00000392542 UGT2B4P06133 528 aa11.98□□□□□ -0.49
RFC5-201ENST00000392542 HOXB6P17509 224 aaKnown RBP11.98□□□□□ -0.49
RFC5-201ENST00000392542 SDC1P18827 310 aa11.98□□□□□ -0.49
RFC5-201ENST00000392542 CYP2A7P20853 494 aa11.98□□□□□ -0.49
RFC5-201ENST00000392542 TACR1P25103 407 aa11.98□□□□□ -0.49
RFC5-201ENST00000392542 PTPN6P29350 595 aa11.98□□□□□ -0.49
RFC5-201ENST00000392542 HLA-FP30511 346 aa11.98□□□□□ -0.49
RFC5-201ENST00000392542 HNRNPFP52597 415 aaKnown RBP11.98□□□□□ -0.49
RFC5-201ENST00000392542 PRMT2P55345 433 aa11.98□□□□□ -0.49
RFC5-201ENST00000392542 ABHD18Q0P651 414 aa11.98□□□□□ -0.49
RFC5-201ENST00000392542 PTCHD3Q3KNS1 767 aa11.98□□□□□ -0.49
RFC5-201ENST00000392542 MSANTD1Q6ZTZ1 278 aa11.98□□□□□ -0.49
RFC5-201ENST00000392542 DET1Q7L5Y6 550 aa11.98□□□□□ -0.49
RFC5-201ENST00000392542 VRK3Q8IV63 474 aa11.98□□□□□ -0.49
RFC5-201ENST00000392542 HS3ST5Q8IZT8 346 aa11.98□□□□□ -0.49
RFC5-201ENST00000392542 EID3Q8N140 333 aa11.98□□□□□ -0.49
RFC5-201ENST00000392542 ZCCHC7Q8N3Z6 543 aaKnown RBP11.98□□□□□ -0.49
RFC5-201ENST00000392542 OR13F1Q8NGS4 319 aa11.98□□□□□ -0.49
RFC5-201ENST00000392542 NETO1Q8TDF5 533 aa11.98□□□□□ -0.49
RFC5-201ENST00000392542 HDAC2Q92769 488 aaKnown RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms