RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 HNF1BP35680 557 aa18.57■□□□□ 0.56
CCDC50-202ENST00000392456 CSRP3P50461 194 aa18.57■□□□□ 0.56
CCDC50-202ENST00000392456 POLR2GP62487 172 aaKnown RBP eCLIP18.57■□□□□ 0.56
CCDC50-202ENST00000392456 FLOT2Q14254 428 aa18.57■□□□□ 0.56
CCDC50-202ENST00000392456 DMC1Q14565 340 aa18.57■□□□□ 0.56
CCDC50-202ENST00000392456 USP10Q14694 798 aaKnown RBP18.57■□□□□ 0.56
CCDC50-202ENST00000392456 UTS2BQ765I0 119 aa18.57■□□□□ 0.56
CCDC50-202ENST00000392456 TSPAN33Q86UF1 283 aa18.57■□□□□ 0.56
CCDC50-202ENST00000392456 CLYBLQ8N0X4 340 aa18.57■□□□□ 0.56
CCDC50-202ENST00000392456 PARP8Q8N3A8 854 aa18.57■□□□□ 0.56
CCDC50-202ENST00000392456 SPATA6LQ8N4H0 392 aa18.57■□□□□ 0.56
CCDC50-202ENST00000392456 OR4L1Q8NH43 312 aa18.57■□□□□ 0.56
CCDC50-202ENST00000392456 ZSCAN5AQ9BUG6 496 aa18.57■□□□□ 0.56
CCDC50-202ENST00000392456 GON7Q9BXV9 100 aa18.57■□□□□ 0.56
CCDC50-202ENST00000392456 FAM96AQ9H5X1 160 aa18.57■□□□□ 0.56
CCDC50-202ENST00000392456 MTCH2Q9Y6C9 303 aa18.57■□□□□ 0.56
CCDC50-202ENST00000392456 A0A0J9YYE9 177 aa18.56■□□□□ 0.56
CCDC50-202ENST00000392456 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.56■□□□□ 0.56
CCDC50-202ENST00000392456 FAM95CA0A1B0GW59 222 aa18.56■□□□□ 0.56
CCDC50-202ENST00000392456 CD3EAPO15446 510 aaKnown RBP18.56■□□□□ 0.56
CCDC50-202ENST00000392456 CCNKO75909 580 aa18.56■□□□□ 0.56
CCDC50-202ENST00000392456 NFATC1O95644 943 aa18.56■□□□□ 0.56
CCDC50-202ENST00000392456 TRBC1P01850 177 aa18.56■□□□□ 0.56
CCDC50-202ENST00000392456 LAMP2P13473 410 aa18.56■□□□□ 0.56
CCDC50-202ENST00000392456 HOXB8P17481 243 aaPredicted RBP18.56■□□□□ 0.56
CCDC50-202ENST00000392456 ATF4P18848 351 aaPredicted RBP18.56■□□□□ 0.56
CCDC50-202ENST00000392456 LPOP22079 712 aaPredicted RBP18.56■□□□□ 0.56
CCDC50-202ENST00000392456 GSTM2P28161 218 aa18.56■□□□□ 0.56
CCDC50-202ENST00000392456 TAS2R39P59534 338 aa18.56■□□□□ 0.56
CCDC50-202ENST00000392456 CHI3L2Q15782 390 aa18.56■□□□□ 0.56
CCDC50-202ENST00000392456 N4BP2L1Q5TBK1 243 aaPredicted RBP18.56■□□□□ 0.56
CCDC50-202ENST00000392456 FRMD7Q6ZUT3 714 aa18.56■□□□□ 0.56
CCDC50-202ENST00000392456 PIANPQ8IYJ0 282 aa18.56■□□□□ 0.56
CCDC50-202ENST00000392456 MFSD4AQ8N468 514 aa18.56■□□□□ 0.56
CCDC50-202ENST00000392456 OR13F1Q8NGS4 319 aa18.56■□□□□ 0.56
CCDC50-202ENST00000392456 DLG3Q92796 817 aa18.56■□□□□ 0.56
CCDC50-202ENST00000392456 OMDQ99983 421 aa18.56■□□□□ 0.56
CCDC50-202ENST00000392456 CHID1Q9BWS9 393 aa18.56■□□□□ 0.56
CCDC50-202ENST00000392456 NSMCE4AQ9NXX6 385 aa18.56■□□□□ 0.56
CCDC50-202ENST00000392456 KCNK2O95069 426 aa18.56■□□□□ 0.56
CCDC50-202ENST00000392456 CLDN7O95471 211 aa18.56■□□□□ 0.56
CCDC50-202ENST00000392456 KRT20P35900 424 aa18.56■□□□□ 0.56
CCDC50-202ENST00000392456 MRPS15P82914 257 aaKnown RBP18.56■□□□□ 0.56
CCDC50-202ENST00000392456 CDKN3Q16667 212 aa18.56■□□□□ 0.56
CCDC50-202ENST00000392456 CES5AQ6NT32 575 aa18.56■□□□□ 0.56
CCDC50-202ENST00000392456 KCTD8Q6ZWB6 473 aa18.56■□□□□ 0.56
CCDC50-202ENST00000392456 CRLF3Q8IUI8 442 aa18.56■□□□□ 0.56
CCDC50-202ENST00000392456 PCDH20Q8N6Y1 951 aaKnown RBP18.56■□□□□ 0.56
CCDC50-202ENST00000392456 GALNT11Q8NCW6 608 aa18.56■□□□□ 0.56
CCDC50-202ENST00000392456 DACT3Q96B18 629 aaPredicted RBP18.56■□□□□ 0.56
CCDC50-202ENST00000392456 C20orf27Q9GZN8 174 aa18.56■□□□□ 0.56
CCDC50-202ENST00000392456 SUV39H2Q9H5I1 410 aa18.56■□□□□ 0.56
CCDC50-202ENST00000392456 DIABLOQ9NR28 239 aa18.56■□□□□ 0.56
CCDC50-202ENST00000392456 ZNF221Q9UK13 617 aa18.56■□□□□ 0.56
CCDC50-202ENST00000392456 COMMD10Q9Y6G5 202 aa18.56■□□□□ 0.56
CCDC50-202ENST00000392456 PDPK1O15530 556 aa18.55■□□□□ 0.56
CCDC50-202ENST00000392456 AKAP10O43572 662 aa18.55■□□□□ 0.56
CCDC50-202ENST00000392456 SNNO75324 88 aaPredicted RBP18.55■□□□□ 0.56
CCDC50-202ENST00000392456 PCNAP12004 261 aa18.55■□□□□ 0.56
CCDC50-202ENST00000392456 SERPINA4P29622 427 aa18.55■□□□□ 0.56
CCDC50-202ENST00000392456 CA5AP35218 305 aa18.55■□□□□ 0.56
CCDC50-202ENST00000392456 GRIA4P48058 902 aa18.55■□□□□ 0.56
CCDC50-202ENST00000392456 PEX6Q13608 980 aa18.55■□□□□ 0.56
CCDC50-202ENST00000392456 ZNF557Q8N988 423 aaPredicted RBP18.55■□□□□ 0.56
CCDC50-202ENST00000392456 CMTM5Q96DZ9 223 aa18.55■□□□□ 0.56
CCDC50-202ENST00000392456 ELOVL2Q9NXB9 296 aa18.55■□□□□ 0.56
CCDC50-202ENST00000392456 IL17CQ9P0M4 197 aa18.55■□□□□ 0.56
CCDC50-202ENST00000392456 PACSIN3Q9UKS6 424 aa18.55■□□□□ 0.56
CCDC50-202ENST00000392456 SLC27A6Q9Y2P4 619 aa18.55■□□□□ 0.56
CCDC50-202ENST00000392456 NPIPB15A6NHN6 443 aaPredicted RBP18.55■□□□□ 0.56
CCDC50-202ENST00000392456 SOCS5O75159 536 aa18.55■□□□□ 0.56
CCDC50-202ENST00000392456 POP4O95707 220 aaKnown RBP18.55■□□□□ 0.56
CCDC50-202ENST00000392456 CTSLP07711 333 aa18.55■□□□□ 0.56
CCDC50-202ENST00000392456 SLC35E2BP0CK96 405 aa18.55■□□□□ 0.56
CCDC50-202ENST00000392456 GFAPP14136 432 aa18.55■□□□□ 0.56
CCDC50-202ENST00000392456 PIK3R1P27986 724 aa18.55■□□□□ 0.56
CCDC50-202ENST00000392456 UGP2Q16851 508 aa18.55■□□□□ 0.56
CCDC50-202ENST00000392456 POM121L1PQ3SYA9 428 aa18.55■□□□□ 0.56
CCDC50-202ENST00000392456 RAB2BQ8WUD1 216 aa18.55■□□□□ 0.56
CCDC50-202ENST00000392456 PIK3R3Q92569 461 aa18.55■□□□□ 0.56
CCDC50-202ENST00000392456 ECHDC3Q96DC8 303 aa18.55■□□□□ 0.56
CCDC50-202ENST00000392456 ELMO2Q96JJ3 720 aa18.55■□□□□ 0.56
CCDC50-202ENST00000392456 CSF3RQ99062 836 aa18.55■□□□□ 0.56
CCDC50-202ENST00000392456 GPR63Q9BZJ6 419 aa18.55■□□□□ 0.56
CCDC50-202ENST00000392456 ATP6V1HQ9UI12 483 aa18.55■□□□□ 0.56
CCDC50-202ENST00000392456 HCN4Q9Y3Q4 1203 aa18.55■□□□□ 0.56
CCDC50-202ENST00000392456 CXorf51AA0A1B0GTR3 108 aa18.54■□□□□ 0.56
CCDC50-202ENST00000392456 STX7O15400 261 aaKnown RBP18.54■□□□□ 0.56
CCDC50-202ENST00000392456 DEAF1O75398 565 aaPredicted RBP18.54■□□□□ 0.56
CCDC50-202ENST00000392456 MAPK8P45983 427 aa18.54■□□□□ 0.56
CCDC50-202ENST00000392456 CENPAP49450 140 aa18.54■□□□□ 0.56
CCDC50-202ENST00000392456 AASDHQ4L235 1098 aaPredicted RBP18.54■□□□□ 0.56
CCDC50-202ENST00000392456 NHSL2Q5HYW2 709 aa18.54■□□□□ 0.56
CCDC50-202ENST00000392456 PSAPL1Q6NUJ1 521 aa18.54■□□□□ 0.56
CCDC50-202ENST00000392456 ZNF549Q6P9A3 640 aa18.54■□□□□ 0.56
CCDC50-202ENST00000392456 GALNT12Q8IXK2 581 aa18.54■□□□□ 0.56
CCDC50-202ENST00000392456 LINC00518Q8N0U6 118 aa18.54■□□□□ 0.56
CCDC50-202ENST00000392456 SNX31Q8N9S9 440 aa18.54■□□□□ 0.56
CCDC50-202ENST00000392456 ZFP90Q8TF47 636 aa18.54■□□□□ 0.56
CCDC50-202ENST00000392456 MARVELD3Q96A59 401 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms