RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 ZNF667Q5HYK9 610 aa-0.99□□□□□ -2.57
RNU6-540P-201ENST00000384622 MRNIPQ6NTE8 343 aa-0.99□□□□□ -2.57
RNU6-540P-201ENST00000384622 ANKRD54Q6NXT1 300 aa-0.99□□□□□ -2.57
RNU6-540P-201ENST00000384622 DUS1LQ6P1R4 473 aaKnown RBP-0.99□□□□□ -2.57
RNU6-540P-201ENST00000384622 LCLAT1Q6UWP7 414 aa-0.99□□□□□ -2.57
RNU6-540P-201ENST00000384622 B3GNT9Q6UX72 402 aa-0.99□□□□□ -2.57
RNU6-540P-201ENST00000384622 BTN2A1Q7KYR7 527 aa-0.99□□□□□ -2.57
RNU6-540P-201ENST00000384622 BHLHA15Q7RTS1 189 aaPredicted RBP-0.99□□□□□ -2.57
RNU6-540P-201ENST00000384622 DNAJB7Q7Z6W7 309 aaPredicted RBP-0.99□□□□□ -2.57
RNU6-540P-201ENST00000384622 EGFL6Q8IUX8 553 aa-0.99□□□□□ -2.57
RNU6-540P-201ENST00000384622 FAM186BQ8IYM0 893 aa-0.99□□□□□ -2.57
RNU6-540P-201ENST00000384622 SDR16C5Q8N3Y7 309 aa-0.99□□□□□ -2.57
RNU6-540P-201ENST00000384622 PCDH20Q8N6Y1 951 aaKnown RBP-0.99□□□□□ -2.57
RNU6-540P-201ENST00000384622 THAP6Q8TBB0 222 aa-0.99□□□□□ -2.57
RNU6-540P-201ENST00000384622 GTSF1Q8WW33 167 aa-0.99□□□□□ -2.57
RNU6-540P-201ENST00000384622 ITLN1Q8WWA0 313 aa-0.99□□□□□ -2.57
RNU6-540P-201ENST00000384622 NSL1Q96IY1 281 aa-0.99□□□□□ -2.57
RNU6-540P-201ENST00000384622 ZNF570Q96NI8 536 aa-0.99□□□□□ -2.57
RNU6-540P-201ENST00000384622 TTC7AQ9ULT0 858 aaPredicted RBP-0.99□□□□□ -2.57
RNU6-540P-201ENST00000384622 CLCA3PQ9Y6N3 262 aa-0.99□□□□□ -2.57
RNU6-540P-201ENST00000384622 HTTP42858 3142 aa-0.99□□□□□ -2.57
RNU6-540P-201ENST00000384622 MTCL1Q9Y4B5 1905 aaKnown RBP-0.99□□□□□ -2.57
RNU6-540P-201ENST00000384622 ASXL3Q9C0F0 2248 aa-1□□□□□ -2.57
RNU6-540P-201ENST00000384622 TNKS1BP1Q9C0C2 1729 aaKnown RBP-1□□□□□ -2.57
RNU6-540P-201ENST00000384622 SMG1Q96Q15 3661 aaKnown RBP-1□□□□□ -2.57
RNU6-540P-201ENST00000384622 A0A1B0GUL7 405 aa-1□□□□□ -2.57
RNU6-540P-201ENST00000384622 A0A1W2PNN7 141 aa-1□□□□□ -2.57
RNU6-540P-201ENST00000384622 A0A1W2PR80 420 aa-1□□□□□ -2.57
RNU6-540P-201ENST00000384622 OR6C68A6NDL8 312 aa-1□□□□□ -2.57
RNU6-540P-201ENST00000384622 USP27XA6NNY8 438 aa-1□□□□□ -2.57
RNU6-540P-201ENST00000384622 ANKRD66B4E2M5 251 aa-1□□□□□ -2.57
RNU6-540P-201ENST00000384622 NBNO60934 754 aa-1□□□□□ -2.57
RNU6-540P-201ENST00000384622 VENTXO95231 258 aa-1□□□□□ -2.57
RNU6-540P-201ENST00000384622 IGHDP01880 384 aa-1□□□□□ -2.57
RNU6-540P-201ENST00000384622 SRGAP2BP0DMP2 458 aa-1□□□□□ -2.57
RNU6-540P-201ENST00000384622 BRAFP15056 766 aa-1□□□□□ -2.57
RNU6-540P-201ENST00000384622 ZNF8P17098 575 aaPredicted RBP-1□□□□□ -2.57
RNU6-540P-201ENST00000384622 ATF3P18847 181 aa-1□□□□□ -2.57
RNU6-540P-201ENST00000384622 CSRP1P21291 193 aaKnown RBP-1□□□□□ -2.57
RNU6-540P-201ENST00000384622 PLD1Q13393 1074 aa-1□□□□□ -2.57
RNU6-540P-201ENST00000384622 ZRSR2Q15696 482 aaKnown RBP-1□□□□□ -2.57
RNU6-540P-201ENST00000384622 CNGA2Q16280 664 aa-1□□□□□ -2.57
RNU6-540P-201ENST00000384622 DUSP5Q16690 384 aa-1□□□□□ -2.57
RNU6-540P-201ENST00000384622 INAVAQ3KP66 663 aa-1□□□□□ -2.57
RNU6-540P-201ENST00000384622 SLC22A6Q4U2R8 563 aa-1□□□□□ -2.57
RNU6-540P-201ENST00000384622 TOR1AIP1Q5JTV8 583 aa-1□□□□□ -2.57
RNU6-540P-201ENST00000384622 SAXO2Q658L1 398 aa-1□□□□□ -2.57
RNU6-540P-201ENST00000384622 CGB2Q6NT52 195 aa-1□□□□□ -2.57
RNU6-540P-201ENST00000384622 NOTUMQ6P988 496 aa-1□□□□□ -2.57
RNU6-540P-201ENST00000384622 ADAMTSL5Q6ZMM2 481 aa-1□□□□□ -2.57
RNU6-540P-201ENST00000384622 TMUB2Q71RG4 321 aa-1□□□□□ -2.57
RNU6-540P-201ENST00000384622 MTSS1LQ765P7 747 aa-1□□□□□ -2.57
RNU6-540P-201ENST00000384622 RNF44Q7L0R7 432 aa-1□□□□□ -2.57
RNU6-540P-201ENST00000384622 CATSPERDQ86XM0 798 aa-1□□□□□ -2.57
RNU6-540P-201ENST00000384622 FBXO16Q8IX29 292 aaPredicted RBP-1□□□□□ -2.57
RNU6-540P-201ENST00000384622 PIANPQ8IYJ0 282 aa-1□□□□□ -2.57
RNU6-540P-201ENST00000384622 MT1MQ8N339 61 aa-1□□□□□ -2.57
RNU6-540P-201ENST00000384622 ACVR1CQ8NER5 493 aa-1□□□□□ -2.57
RNU6-540P-201ENST00000384622 GDPD5Q8WTR4 605 aa-1□□□□□ -2.57
RNU6-540P-201ENST00000384622 PLAC4Q8WY50 150 aa-1□□□□□ -2.57
RNU6-540P-201ENST00000384622 MVB12AQ96EY5 273 aa-1□□□□□ -2.57
RNU6-540P-201ENST00000384622 C18orf15Q96N68 181 aa-1□□□□□ -2.57
RNU6-540P-201ENST00000384622 TECTBQ96PL2 329 aa-1□□□□□ -2.57
RNU6-540P-201ENST00000384622 SIGLEC12Q96PQ1 595 aa-1□□□□□ -2.57
RNU6-540P-201ENST00000384622 RIOK1Q9BRS2 568 aaKnown RBP-1□□□□□ -2.57
RNU6-540P-201ENST00000384622 GLT8D2Q9H1C3 349 aa-1□□□□□ -2.57
RNU6-540P-201ENST00000384622 CCDC134Q9H6E4 229 aa-1□□□□□ -2.57
RNU6-540P-201ENST00000384622 ESRP2Q9H6T0 727 aaKnown RBP-1□□□□□ -2.57
RNU6-540P-201ENST00000384622 IL1RL2Q9HB29 575 aa-1□□□□□ -2.57
RNU6-540P-201ENST00000384622 SH2D2AQ9NP31 389 aa-1□□□□□ -2.57
RNU6-540P-201ENST00000384622 ATP8A2Q9NTI2 1148 aa-1□□□□□ -2.57
RNU6-540P-201ENST00000384622 PLAGL1Q9UM63 463 aa-1□□□□□ -2.57
RNU6-540P-201ENST00000384622 WIPI2Q9Y4P8 454 aa-1□□□□□ -2.57
RNU6-540P-201ENST00000384622 MUC3AQ02505 3323 aa-1□□□□□ -2.57
RNU6-540P-201ENST00000384622 REV3LO60673 3130 aa-1□□□□□ -2.57
RNU6-540P-201ENST00000384622 SETD1AO15047 1707 aaKnown RBP-1.01□□□□□ -2.57
RNU6-540P-201ENST00000384622 CR1P17927 2039 aa-1.01□□□□□ -2.57
RNU6-540P-201ENST00000384622 CEP350Q5VT06 3117 aa-1.01□□□□□ -2.57
RNU6-540P-201ENST00000384622 ALPK2Q86TB3 2170 aa-1.01□□□□□ -2.57
RNU6-540P-201ENST00000384622 CEP250Q9BV73 2442 aa-1.01□□□□□ -2.57
RNU6-540P-201ENST00000384622 IGKV1OR2-108A0A075B7D4 117 aa-1.01□□□□□ -2.57
RNU6-540P-201ENST00000384622 PNMA6EA0A0J9YXQ4 647 aa-1.01□□□□□ -2.57
RNU6-540P-201ENST00000384622 OR2W5A6NFC9 320 aa-1.01□□□□□ -2.57
RNU6-540P-201ENST00000384622 C16orf90A8MZG2 172 aa-1.01□□□□□ -2.57
RNU6-540P-201ENST00000384622 F8VVB4 439 aa-1.01□□□□□ -2.57
RNU6-540P-201ENST00000384622 F8VWA3 439 aa-1.01□□□□□ -2.57
RNU6-540P-201ENST00000384622 H0YAA0 97 aa-1.01□□□□□ -2.57
RNU6-540P-201ENST00000384622 OVOL1O14753 267 aa-1.01□□□□□ -2.57
RNU6-540P-201ENST00000384622 SYN3O14994 580 aa-1.01□□□□□ -2.57
RNU6-540P-201ENST00000384622 TO15178 435 aa-1.01□□□□□ -2.57
RNU6-540P-201ENST00000384622 EMC8O43402 210 aa-1.01□□□□□ -2.57
RNU6-540P-201ENST00000384622 BUD23O43709 281 aaKnown RBP-1.01□□□□□ -2.57
RNU6-540P-201ENST00000384622 N4BP1O75113 896 aaKnown RBP-1.01□□□□□ -2.57
RNU6-540P-201ENST00000384622 TAF5LO75529 589 aa-1.01□□□□□ -2.57
RNU6-540P-201ENST00000384622 RECQL5O94762 991 aaPredicted RBP-1.01□□□□□ -2.57
RNU6-540P-201ENST00000384622 CER1O95813 267 aa-1.01□□□□□ -2.57
RNU6-540P-201ENST00000384622 MT2AP02795 61 aa-1.01□□□□□ -2.57
RNU6-540P-201ENST00000384622 MT-ND1P03886 318 aa-1.01□□□□□ -2.57
RNU6-540P-201ENST00000384622 MT1AP04731 61 aa-1.01□□□□□ -2.57
RNU6-540P-201ENST00000384622 CYC1P08574 325 aa-1.01□□□□□ -2.57
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms