RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 CAVIN2O95810 425 aa5.06□□□□□ -1.6
RNU6-40P-201ENST00000384254 RLN1P04808 185 aa5.06□□□□□ -1.6
RNU6-40P-201ENST00000384254 ATP1A1P05023 1023 aaKnown RBP5.06□□□□□ -1.6
RNU6-40P-201ENST00000384254 FAM86B2P0C5J1 330 aa5.06□□□□□ -1.6
RNU6-40P-201ENST00000384254 TGFB3P10600 412 aa5.06□□□□□ -1.6
RNU6-40P-201ENST00000384254 HSPA8P11142 646 aaKnown RBP5.06□□□□□ -1.6
RNU6-40P-201ENST00000384254 FGF3P11487 239 aaPredicted RBP5.06□□□□□ -1.6
RNU6-40P-201ENST00000384254 JAK1P23458 1154 aa5.06□□□□□ -1.6
RNU6-40P-201ENST00000384254 OAS2P29728 719 aaKnown RBP5.06□□□□□ -1.6
RNU6-40P-201ENST00000384254 PTGER4P35408 488 aa5.06□□□□□ -1.6
RNU6-40P-201ENST00000384254 WNT5AP41221 380 aa5.06□□□□□ -1.6
RNU6-40P-201ENST00000384254 NR2C2P49116 596 aa5.06□□□□□ -1.6
RNU6-40P-201ENST00000384254 ALDH3A2P51648 485 aa5.06□□□□□ -1.6
RNU6-40P-201ENST00000384254 CDH11P55287 796 aa5.06□□□□□ -1.6
RNU6-40P-201ENST00000384254 UBASH3AP57075 661 aa5.06□□□□□ -1.6
RNU6-40P-201ENST00000384254 MAT1AQ00266 395 aaKnown RBP5.06□□□□□ -1.6
RNU6-40P-201ENST00000384254 COASYQ13057 564 aa5.06□□□□□ -1.6
RNU6-40P-201ENST00000384254 FHL1Q13642 323 aa5.06□□□□□ -1.6
RNU6-40P-201ENST00000384254 ITGA7Q13683 1181 aa5.06□□□□□ -1.6
RNU6-40P-201ENST00000384254 SLMAPQ14BN4 828 aa5.06□□□□□ -1.6
RNU6-40P-201ENST00000384254 NPTX1Q15818 432 aa5.06□□□□□ -1.6
RNU6-40P-201ENST00000384254 CDO1Q16878 200 aa5.06□□□□□ -1.6
RNU6-40P-201ENST00000384254 ODF4Q2M2E3 257 aa5.06□□□□□ -1.6
RNU6-40P-201ENST00000384254 ZRANB3Q5FWF4 1079 aa5.06□□□□□ -1.6
RNU6-40P-201ENST00000384254 ZNF324BQ6AW86 544 aaPredicted RBP5.06□□□□□ -1.6
RNU6-40P-201ENST00000384254 PRSS57Q6UWY2 283 aa5.06□□□□□ -1.6
RNU6-40P-201ENST00000384254 OTOAQ7RTW8 1153 aa5.06□□□□□ -1.6
RNU6-40P-201ENST00000384254 DSG4Q86SJ6 1040 aa5.06□□□□□ -1.6
RNU6-40P-201ENST00000384254 SAMD14Q8IZD0 417 aaPredicted RBP5.06□□□□□ -1.6
RNU6-40P-201ENST00000384254 POC1AQ8NBT0 407 aa5.06□□□□□ -1.6
RNU6-40P-201ENST00000384254 MSANTD4Q8NCY6 345 aa5.06□□□□□ -1.6
RNU6-40P-201ENST00000384254 OR1J1Q8NGS3 322 aa5.06□□□□□ -1.6
RNU6-40P-201ENST00000384254 VANGL1Q8TAA9 524 aaPredicted RBP5.06□□□□□ -1.6
RNU6-40P-201ENST00000384254 GRAPLQ8TC17 118 aaPredicted RBP5.06□□□□□ -1.6
RNU6-40P-201ENST00000384254 AFAP1L1Q8TED9 768 aa5.06□□□□□ -1.6
RNU6-40P-201ENST00000384254 DNASE1L2Q92874 299 aa5.06□□□□□ -1.6
RNU6-40P-201ENST00000384254 CD101Q93033 1021 aa5.06□□□□□ -1.6
RNU6-40P-201ENST00000384254 BSCL2Q96G97 398 aaPredicted RBP5.06□□□□□ -1.6
RNU6-40P-201ENST00000384254 MARK4Q96L34 752 aa5.06□□□□□ -1.6
RNU6-40P-201ENST00000384254 WACQ9BTA9 647 aa5.06□□□□□ -1.6
RNU6-40P-201ENST00000384254 URM1Q9BTM9 101 aaKnown RBP5.06□□□□□ -1.6
RNU6-40P-201ENST00000384254 S1PR5Q9H228 398 aa5.06□□□□□ -1.6
RNU6-40P-201ENST00000384254 ARRDC1-AS1Q9H2J1 176 aa5.06□□□□□ -1.6
RNU6-40P-201ENST00000384254 FAM118AQ9NWS6 357 aa5.06□□□□□ -1.6
RNU6-40P-201ENST00000384254 COQ3Q9NZJ6 369 aa5.06□□□□□ -1.6
RNU6-40P-201ENST00000384254 CACNG4Q9UBN1 327 aa5.06□□□□□ -1.6
RNU6-40P-201ENST00000384254 LRWD1Q9UFC0 647 aa5.06□□□□□ -1.6
RNU6-40P-201ENST00000384254 ZDHHC2Q9UIJ5 367 aa5.06□□□□□ -1.6
RNU6-40P-201ENST00000384254 TMED3Q9Y3Q3 217 aa5.06□□□□□ -1.6
RNU6-40P-201ENST00000384254 PLOD2O00469 737 aa5.05□□□□□ -1.6
RNU6-40P-201ENST00000384254 NR3C1P04150 777 aa5.05□□□□□ -1.6
RNU6-40P-201ENST00000384254 SPP1P10451 314 aa5.05□□□□□ -1.6
RNU6-40P-201ENST00000384254 FOXG1P55316 489 aaPredicted RBP5.05□□□□□ -1.6
RNU6-40P-201ENST00000384254 POU3F1Q03052 451 aaPredicted RBP5.05□□□□□ -1.6
RNU6-40P-201ENST00000384254 KLC1Q07866 573 aa5.05□□□□□ -1.6
RNU6-40P-201ENST00000384254 ILF2Q12905 390 aaKnown RBP5.05□□□□□ -1.6
RNU6-40P-201ENST00000384254 PHKG1Q16816 387 aa5.05□□□□□ -1.6
RNU6-40P-201ENST00000384254 ACCSLQ4AC99 568 aa5.05□□□□□ -1.6
RNU6-40P-201ENST00000384254 ZNF585BQ52M93 769 aa5.05□□□□□ -1.6
RNU6-40P-201ENST00000384254 CASC4Q6P4E1 433 aa5.05□□□□□ -1.6
RNU6-40P-201ENST00000384254 PIWIL3Q7Z3Z3 882 aaKnown RBP5.05□□□□□ -1.6
RNU6-40P-201ENST00000384254 PLD3Q8IV08 490 aa5.05□□□□□ -1.6
RNU6-40P-201ENST00000384254 UNC45BQ8IWX7 931 aa5.05□□□□□ -1.6
RNU6-40P-201ENST00000384254 NDUFAF2Q8N183 169 aa5.05□□□□□ -1.6
RNU6-40P-201ENST00000384254 DNAJC22Q8N4W6 341 aa5.05□□□□□ -1.6
RNU6-40P-201ENST00000384254 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.05□□□□□ -1.6
RNU6-40P-201ENST00000384254 NHLRC2Q8NBF2 726 aa5.05□□□□□ -1.6
RNU6-40P-201ENST00000384254 OR2T12Q8NG77 320 aa5.05□□□□□ -1.6
RNU6-40P-201ENST00000384254 FGFBP3Q8TAT2 258 aa5.05□□□□□ -1.6
RNU6-40P-201ENST00000384254 GRK7Q8WTQ7 553 aa5.05□□□□□ -1.6
RNU6-40P-201ENST00000384254 RAD54LQ92698 747 aa5.05□□□□□ -1.6
RNU6-40P-201ENST00000384254 SPATA33Q96N06 139 aa5.05□□□□□ -1.6
RNU6-40P-201ENST00000384254 RAD9AQ99638 391 aa5.05□□□□□ -1.6
RNU6-40P-201ENST00000384254 MMADHCQ9H3L0 296 aaPredicted RBP5.05□□□□□ -1.6
RNU6-40P-201ENST00000384254 ABCB8Q9NUT2 735 aa5.05□□□□□ -1.6
RNU6-40P-201ENST00000384254 DAPK2Q9UIK4 370 aa5.05□□□□□ -1.6
RNU6-40P-201ENST00000384254 ANKRD61A6NGH8 418 aa5.04□□□□□ -1.6
RNU6-40P-201ENST00000384254 OOEPA6NGQ2 149 aa5.04□□□□□ -1.6
RNU6-40P-201ENST00000384254 SMTNL1A8MU46 457 aa5.04□□□□□ -1.6
RNU6-40P-201ENST00000384254 DNM1LO00429 736 aa5.04□□□□□ -1.6
RNU6-40P-201ENST00000384254 C9P02748 559 aa5.04□□□□□ -1.6
RNU6-40P-201ENST00000384254 FGF5P12034 268 aa5.04□□□□□ -1.6
RNU6-40P-201ENST00000384254 AMD1P17707 334 aa5.04□□□□□ -1.6
RNU6-40P-201ENST00000384254 EPORP19235 508 aa5.04□□□□□ -1.6
RNU6-40P-201ENST00000384254 MSH3P20585 1137 aa5.04□□□□□ -1.6
RNU6-40P-201ENST00000384254 RGS7P49802 495 aa5.04□□□□□ -1.6
RNU6-40P-201ENST00000384254 MTCP1P56278 107 aa5.04□□□□□ -1.6
RNU6-40P-201ENST00000384254 DMP1Q13316 513 aaPredicted RBP5.04□□□□□ -1.6
RNU6-40P-201ENST00000384254 NFE2L1Q14494 772 aa5.04□□□□□ -1.6
RNU6-40P-201ENST00000384254 CA9Q16790 459 aa5.04□□□□□ -1.6
RNU6-40P-201ENST00000384254 MEP1BQ16820 701 aa5.04□□□□□ -1.6
RNU6-40P-201ENST00000384254 ANKRD20A4Q4UJ75 823 aa5.04□□□□□ -1.6
RNU6-40P-201ENST00000384254 ANKRD20A8PQ5CZ79 823 aa5.04□□□□□ -1.6
RNU6-40P-201ENST00000384254 ANKRD20A2Q5SQ80 823 aa5.04□□□□□ -1.6
RNU6-40P-201ENST00000384254 ANKRD20A1Q5TYW2 823 aa5.04□□□□□ -1.6
RNU6-40P-201ENST00000384254 ANKRD20A3Q5VUR7 823 aa5.04□□□□□ -1.6
RNU6-40P-201ENST00000384254 ZNF517Q6ZMY9 492 aaPredicted RBP5.04□□□□□ -1.6
RNU6-40P-201ENST00000384254 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.04□□□□□ -1.6
RNU6-40P-201ENST00000384254 FOXL2NBQ6ZUU3 175 aa5.04□□□□□ -1.6
RNU6-40P-201ENST00000384254 NRARPQ7Z6K4 114 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms