RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 NUDT4Q9NZJ9 180 aa15.89■□□□□ 0.13
NKX3-1-201ENST00000380871 FTH1P02794 183 aa15.89■□□□□ 0.13
NKX3-1-201ENST00000380871 F11P03951 625 aa15.89■□□□□ 0.13
NKX3-1-201ENST00000380871 PGRP06401 933 aa15.89■□□□□ 0.13
NKX3-1-201ENST00000380871 PHC1P78364 1004 aa15.89■□□□□ 0.13
NKX3-1-201ENST00000380871 VAC14Q08AM6 782 aa15.89■□□□□ 0.13
NKX3-1-201ENST00000380871 ST13P5Q8NFI4 369 aaPredicted RBP15.89■□□□□ 0.13
NKX3-1-201ENST00000380871 PJA1Q8NG27 643 aa15.89■□□□□ 0.13
NKX3-1-201ENST00000380871 CCDC115Q96NT0 180 aa15.89■□□□□ 0.13
NKX3-1-201ENST00000380871 DAPK2Q9UIK4 370 aa15.89■□□□□ 0.13
NKX3-1-201ENST00000380871 ENPP5Q9UJA9 477 aa15.89■□□□□ 0.13
NKX3-1-201ENST00000380871 PLXNA4Q9HCM2 1894 aa15.89■□□□□ 0.13
NKX3-1-201ENST00000380871 CHD5Q8TDI0 1954 aa15.89■□□□□ 0.13
NKX3-1-201ENST00000380871 A0A1W2PRU2 124 aa15.88■□□□□ 0.13
NKX3-1-201ENST00000380871 DIRAS1O95057 198 aa15.88■□□□□ 0.13
NKX3-1-201ENST00000380871 HPRP00739 348 aa15.88■□□□□ 0.13
NKX3-1-201ENST00000380871 TGFBR1P36897 503 aa15.88■□□□□ 0.13
NKX3-1-201ENST00000380871 IL5RAQ01344 420 aa15.88■□□□□ 0.13
NKX3-1-201ENST00000380871 EMX1Q04741 257 aaPredicted RBP15.88■□□□□ 0.13
NKX3-1-201ENST00000380871 SFSWAPQ12872 951 aaKnown RBP15.88■□□□□ 0.13
NKX3-1-201ENST00000380871 DGCR6Q14129 220 aa15.88■□□□□ 0.13
NKX3-1-201ENST00000380871 SIM2Q14190 667 aaPredicted RBP15.88■□□□□ 0.13
NKX3-1-201ENST00000380871 BBS7Q8IWZ6 715 aa15.88■□□□□ 0.13
NKX3-1-201ENST00000380871 TTC30BQ8N4P2 665 aa15.88■□□□□ 0.13
NKX3-1-201ENST00000380871 TAMM41Q96BW9 452 aa15.88■□□□□ 0.13
NKX3-1-201ENST00000380871 PRSS21Q9Y6M0 314 aa15.88■□□□□ 0.13
NKX3-1-201ENST00000380871 TMEM221A6NGB7 291 aa15.88■□□□□ 0.13
NKX3-1-201ENST00000380871 ZBBXA8MT70 800 aa15.88■□□□□ 0.13
NKX3-1-201ENST00000380871 SOD2P04179 222 aa15.88■□□□□ 0.13
NKX3-1-201ENST00000380871 KCNC4Q03721 635 aa15.88■□□□□ 0.13
NKX3-1-201ENST00000380871 TRIM16LQ309B1 348 aa15.88■□□□□ 0.13
NKX3-1-201ENST00000380871 HHIPL1Q96JK4 782 aa15.88■□□□□ 0.13
NKX3-1-201ENST00000380871 RBM4BQ9BQ04 359 aaKnown RBP15.88■□□□□ 0.13
NKX3-1-201ENST00000380871 INPP5KQ9BT40 448 aa15.88■□□□□ 0.13
NKX3-1-201ENST00000380871 RBM4Q9BWF3 364 aaKnown RBP15.88■□□□□ 0.13
NKX3-1-201ENST00000380871 DPY30Q9C005 99 aa15.88■□□□□ 0.13
NKX3-1-201ENST00000380871 ERVK-18Q9QC07 812 aa15.88■□□□□ 0.13
NKX3-1-201ENST00000380871 LHX3Q9UBR4 397 aa15.88■□□□□ 0.13
NKX3-1-201ENST00000380871 SH3BP1Q9Y3L3 701 aa15.88■□□□□ 0.13
NKX3-1-201ENST00000380871 PCDHB14Q9Y5E9 798 aa15.88■□□□□ 0.13
NKX3-1-201ENST00000380871 INSL5Q9Y5Q6 135 aa15.88■□□□□ 0.13
NKX3-1-201ENST00000380871 CASP8AP2Q9UKL3 1982 aa15.88■□□□□ 0.13
NKX3-1-201ENST00000380871 KRBA1A5PL33 1030 aa15.88■□□□□ 0.13
NKX3-1-201ENST00000380871 TEX28O15482 410 aa15.88■□□□□ 0.13
NKX3-1-201ENST00000380871 SEC22BO75396 215 aa15.88■□□□□ 0.13
NKX3-1-201ENST00000380871 WEE1P30291 646 aa15.88■□□□□ 0.13
NKX3-1-201ENST00000380871 HPCAL1P37235 193 aa15.88■□□□□ 0.13
NKX3-1-201ENST00000380871 SLC14A1Q13336 389 aa15.88■□□□□ 0.13
NKX3-1-201ENST00000380871 PCBP2Q15366 365 aaKnown RBP eCLIP15.88■□□□□ 0.13
NKX3-1-201ENST00000380871 TMEM236Q5W0B7 351 aa15.88■□□□□ 0.13
NKX3-1-201ENST00000380871 NCEH1Q6PIU2 408 aa15.88■□□□□ 0.13
NKX3-1-201ENST00000380871 CCDC81Q6ZN84 652 aa15.88■□□□□ 0.13
NKX3-1-201ENST00000380871 TMEM150AQ86TG1 271 aa15.88■□□□□ 0.13
NKX3-1-201ENST00000380871 TSPAN33Q86UF1 283 aa15.88■□□□□ 0.13
NKX3-1-201ENST00000380871 ALPK1Q96QP1 1244 aa15.88■□□□□ 0.13
NKX3-1-201ENST00000380871 OR52E6Q96RD3 313 aa15.88■□□□□ 0.13
NKX3-1-201ENST00000380871 P2RY12Q9H244 342 aa15.88■□□□□ 0.13
NKX3-1-201ENST00000380871 PAIP2BQ9ULR5 123 aaKnown RBP15.88■□□□□ 0.13
NKX3-1-201ENST00000380871 SNX5Q9Y5X3 404 aa15.88■□□□□ 0.13
NKX3-1-201ENST00000380871 C16orf96A6NNT2 1141 aa15.87■□□□□ 0.13
NKX3-1-201ENST00000380871 NRG2O14511 850 aaPredicted RBP15.87■□□□□ 0.13
NKX3-1-201ENST00000380871 CREG1O75629 220 aa15.87■□□□□ 0.13
NKX3-1-201ENST00000380871 PRAMEF1O95521 474 aa15.87■□□□□ 0.13
NKX3-1-201ENST00000380871 OTCP00480 354 aa15.87■□□□□ 0.13
NKX3-1-201ENST00000380871 AKT1P31749 480 aa15.87■□□□□ 0.13
NKX3-1-201ENST00000380871 CTSOP43234 321 aaPredicted RBP15.87■□□□□ 0.13
NKX3-1-201ENST00000380871 VBP1P61758 197 aa15.87■□□□□ 0.13
NKX3-1-201ENST00000380871 SMN1Q16637 294 aaKnown RBP15.87■□□□□ 0.13
NKX3-1-201ENST00000380871 ADPRMQ3LIE5 342 aa15.87■□□□□ 0.13
NKX3-1-201ENST00000380871 NIPAL1Q6NVV3 410 aa15.87■□□□□ 0.13
NKX3-1-201ENST00000380871 RFLNAQ6ZTI6 216 aa15.87■□□□□ 0.13
NKX3-1-201ENST00000380871 SLCO6A1Q86UG4 719 aa15.87■□□□□ 0.13
NKX3-1-201ENST00000380871 SERPINA9Q86WD7 417 aa15.87■□□□□ 0.13
NKX3-1-201ENST00000380871 DCP2Q8IU60 420 aaKnown RBP15.87■□□□□ 0.13
NKX3-1-201ENST00000380871 CHPFQ8IZ52 775 aa15.87■□□□□ 0.13
NKX3-1-201ENST00000380871 RGL4Q8IZJ4 473 aa15.87■□□□□ 0.13
NKX3-1-201ENST00000380871 CMTM8Q8IZV2 173 aa15.87■□□□□ 0.13
NKX3-1-201ENST00000380871 MYO19Q96H55 970 aa15.87■□□□□ 0.13
NKX3-1-201ENST00000380871 CORO1BQ9BR76 489 aa15.87■□□□□ 0.13
NKX3-1-201ENST00000380871 MRPL17Q9NRX2 175 aaKnown RBP15.87■□□□□ 0.13
NKX3-1-201ENST00000380871 BLOC1S6Q9UL45 172 aa15.87■□□□□ 0.13
NKX3-1-201ENST00000380871 ZNF490Q9ULM2 529 aaPredicted RBP15.87■□□□□ 0.13
NKX3-1-201ENST00000380871 ESR1P03372 595 aa15.87■□□□□ 0.13
NKX3-1-201ENST00000380871 POM121L1PQ3SYA9 428 aa15.87■□□□□ 0.13
NKX3-1-201ENST00000380871 ZNF691Q5VV52 312 aa15.87■□□□□ 0.13
NKX3-1-201ENST00000380871 RNF168Q8IYW5 571 aaPredicted RBP15.87■□□□□ 0.13
NKX3-1-201ENST00000380871 CRIPAKQ8N1N5 446 aa15.87■□□□□ 0.13
NKX3-1-201ENST00000380871 FAR1Q8WVX9 515 aa15.87■□□□□ 0.13
NKX3-1-201ENST00000380871 MAGED4Q96JG8 741 aa15.87■□□□□ 0.13
NKX3-1-201ENST00000380871 YME1L1Q96TA2 773 aa15.87■□□□□ 0.13
NKX3-1-201ENST00000380871 ZBTB18Q99592 522 aa15.87■□□□□ 0.13
NKX3-1-201ENST00000380871 PRDM8Q9NQV8 689 aa15.87■□□□□ 0.13
NKX3-1-201ENST00000380871 DHRS7Q9Y394 339 aa15.87■□□□□ 0.13
NKX3-1-201ENST00000380871 BACE2Q9Y5Z0 518 aa15.87■□□□□ 0.13
NKX3-1-201ENST00000380871 BCKDKO14874 412 aa15.86■□□□□ 0.13
NKX3-1-201ENST00000380871 PFDN6O15212 129 aa15.86■□□□□ 0.13
NKX3-1-201ENST00000380871 NDUFS2O75306 463 aa15.86■□□□□ 0.13
NKX3-1-201ENST00000380871 CCL5P13501 91 aa15.86■□□□□ 0.13
NKX3-1-201ENST00000380871 CSF2RAP15509 400 aa15.86■□□□□ 0.13
NKX3-1-201ENST00000380871 EPHA2P29317 976 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms