RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 OSCP1Q8WVF1 389 aa12.3□□□□□ -0.44
VPS16-202ENST00000380445 ATL1Q8WXF7 558 aa12.3□□□□□ -0.44
VPS16-202ENST00000380445 ING5Q8WYH8 240 aa12.3□□□□□ -0.44
VPS16-202ENST00000380445 NSMCE2Q96MF7 247 aa12.3□□□□□ -0.44
VPS16-202ENST00000380445 FAM83CQ9BQN1 747 aa12.3□□□□□ -0.44
VPS16-202ENST00000380445 OSBPL6Q9BZF3 934 aa12.3□□□□□ -0.44
VPS16-202ENST00000380445 TRIM8Q9BZR9 551 aa12.3□□□□□ -0.44
VPS16-202ENST00000380445 CLMPQ9H6B4 373 aa12.3□□□□□ -0.44
VPS16-202ENST00000380445 SLC27A6Q9Y2P4 619 aa12.3□□□□□ -0.44
VPS16-202ENST00000380445 HCFC2Q9Y5Z7 792 aa12.3□□□□□ -0.44
VPS16-202ENST00000380445 SMIM31A0A1B0GVY4 71 aa12.3□□□□□ -0.44
VPS16-202ENST00000380445 SERTM1A2A2V5 107 aa12.3□□□□□ -0.44
VPS16-202ENST00000380445 HOXC11O43248 304 aaPredicted RBP12.3□□□□□ -0.44
VPS16-202ENST00000380445 UGDHO60701 494 aa12.3□□□□□ -0.44
VPS16-202ENST00000380445 ATG13O75143 517 aa12.3□□□□□ -0.44
VPS16-202ENST00000380445 MTX2O75431 263 aa12.3□□□□□ -0.44
VPS16-202ENST00000380445 E2F6O75461 281 aa12.3□□□□□ -0.44
VPS16-202ENST00000380445 PDYNP01213 254 aa12.3□□□□□ -0.44
VPS16-202ENST00000380445 PRNPP04156 253 aa12.3□□□□□ -0.44
VPS16-202ENST00000380445 CYP17A1P05093 508 aa12.3□□□□□ -0.44
VPS16-202ENST00000380445 PGRP06401 933 aa12.3□□□□□ -0.44
VPS16-202ENST00000380445 CTSLP07711 333 aa12.3□□□□□ -0.44
VPS16-202ENST00000380445 CISD3P0C7P0 127 aa12.3□□□□□ -0.44
VPS16-202ENST00000380445 MTHFD1P11586 935 aaKnown RBP12.3□□□□□ -0.44
VPS16-202ENST00000380445 EPORP19235 508 aa12.3□□□□□ -0.44
VPS16-202ENST00000380445 TXNL4AP83876 142 aaKnown RBP12.3□□□□□ -0.44
VPS16-202ENST00000380445 FAM174BQ3ZCQ3 159 aa12.3□□□□□ -0.44
VPS16-202ENST00000380445 SYTL3Q4VX76 610 aa12.3□□□□□ -0.44
VPS16-202ENST00000380445 USP39Q53GS9 565 aaKnown RBP12.3□□□□□ -0.44
VPS16-202ENST00000380445 ZNF697Q5TEC3 545 aa12.3□□□□□ -0.44
VPS16-202ENST00000380445 GLYATQ6IB77 296 aa12.3□□□□□ -0.44
VPS16-202ENST00000380445 TECPR1Q7Z6L1 1165 aa12.3□□□□□ -0.44
VPS16-202ENST00000380445 SMYD1Q8NB12 490 aa12.3□□□□□ -0.44
VPS16-202ENST00000380445 MYLIPQ8WY64 445 aa12.3□□□□□ -0.44
VPS16-202ENST00000380445 TMEM159Q96B96 161 aa12.3□□□□□ -0.44
VPS16-202ENST00000380445 FBXL8Q96CD0 374 aa12.3□□□□□ -0.44
VPS16-202ENST00000380445 P2RY13Q9BPV8 354 aa12.3□□□□□ -0.44
VPS16-202ENST00000380445 ZNF696Q9H7X3 374 aa12.3□□□□□ -0.44
VPS16-202ENST00000380445 TCRBV5S2A0A599 114 aa12.3□□□□□ -0.44
VPS16-202ENST00000380445 C7orf72A4D263 438 aa12.3□□□□□ -0.44
VPS16-202ENST00000380445 NPIPB8E9PQR5 432 aa12.3□□□□□ -0.44
VPS16-202ENST00000380445 CLPTM1O96005 669 aa12.3□□□□□ -0.44
VPS16-202ENST00000380445 GSTM1P09488 218 aa12.3□□□□□ -0.44
VPS16-202ENST00000380445 C7P10643 843 aa12.3□□□□□ -0.44
VPS16-202ENST00000380445 RPS14P62263 151 aaKnown RBP12.3□□□□□ -0.44
VPS16-202ENST00000380445 GSTM4Q03013 218 aa12.3□□□□□ -0.44
VPS16-202ENST00000380445 TMTC4Q5T4D3 741 aa12.3□□□□□ -0.44
VPS16-202ENST00000380445 SERPINA13PQ6UXR4 307 aa12.3□□□□□ -0.44
VPS16-202ENST00000380445 LIPIQ6XZB0 460 aa12.3□□□□□ -0.44
VPS16-202ENST00000380445 GLYATL1Q969I3 302 aa12.3□□□□□ -0.44
VPS16-202ENST00000380445 ABTB1Q969K4 478 aaPredicted RBP12.3□□□□□ -0.44
VPS16-202ENST00000380445 MTFMTQ96DP5 389 aaKnown RBP12.3□□□□□ -0.44
VPS16-202ENST00000380445 CMTM7Q96FZ5 175 aa12.3□□□□□ -0.44
VPS16-202ENST00000380445 ACPTQ9BZG2 426 aa12.3□□□□□ -0.44
VPS16-202ENST00000380445 NOTCH4Q99466 2003 aa12.29□□□□□ -0.44
VPS16-202ENST00000380445 SGTAO43765 313 aa12.29□□□□□ -0.44
VPS16-202ENST00000380445 TULP3O75386 442 aa12.29□□□□□ -0.44
VPS16-202ENST00000380445 BCKDHAP12694 445 aa12.29□□□□□ -0.44
VPS16-202ENST00000380445 ACPPP15309 386 aa12.29□□□□□ -0.44
VPS16-202ENST00000380445 FUT4P22083 530 aa12.29□□□□□ -0.44
VPS16-202ENST00000380445 MMP12P39900 470 aa12.29□□□□□ -0.44
VPS16-202ENST00000380445 RPL5P46777 297 aaKnown RBP12.29□□□□□ -0.44
VPS16-202ENST00000380445 CLDN8P56748 225 aa12.29□□□□□ -0.44
VPS16-202ENST00000380445 CAMK1Q14012 370 aa12.29□□□□□ -0.44
VPS16-202ENST00000380445 ACOX1Q15067 660 aa12.29□□□□□ -0.44
VPS16-202ENST00000380445 LIPJQ5W064 366 aa12.29□□□□□ -0.44
VPS16-202ENST00000380445 MFSD2AQ8NA29 543 aa12.29□□□□□ -0.44
VPS16-202ENST00000380445 GTF2H4Q92759 462 aa12.29□□□□□ -0.44
VPS16-202ENST00000380445 PPP1R14BQ96C90 147 aa12.29□□□□□ -0.44
VPS16-202ENST00000380445 AP2M1Q96CW1 435 aa12.29□□□□□ -0.44
VPS16-202ENST00000380445 SLC29A1Q99808 456 aa12.29□□□□□ -0.44
VPS16-202ENST00000380445 MRPS26Q9BYN8 205 aaKnown RBP12.29□□□□□ -0.44
VPS16-202ENST00000380445 MBD1Q9UIS9 605 aaPredicted RBP12.29□□□□□ -0.44
VPS16-202ENST00000380445 SLC22A14Q9Y267 594 aa12.29□□□□□ -0.44
VPS16-202ENST00000380445 KCNE1BA0A087WTH5 132 aa12.29□□□□□ -0.44
VPS16-202ENST00000380445 RNF103-CHMP3A0A140T963 221 aa12.29□□□□□ -0.44
VPS16-202ENST00000380445 OR2AG2A6NM03 316 aa12.29□□□□□ -0.44
VPS16-202ENST00000380445 FADS2P1A8MWK0 482 aa12.29□□□□□ -0.44
VPS16-202ENST00000380445 H0Y858 1186 aa12.29□□□□□ -0.44
VPS16-202ENST00000380445 WNT9AO14904 365 aa12.29□□□□□ -0.44
VPS16-202ENST00000380445 NCK1P16333 377 aa12.29□□□□□ -0.44
VPS16-202ENST00000380445 CKMT2P17540 419 aa12.29□□□□□ -0.44
VPS16-202ENST00000380445 OXTRP30559 389 aa12.29□□□□□ -0.44
VPS16-202ENST00000380445 GRIA2P42262 883 aa12.29□□□□□ -0.44
VPS16-202ENST00000380445 CCT8P50990 548 aa12.29□□□□□ -0.44
VPS16-202ENST00000380445 MYBPC1Q00872 1141 aa12.29□□□□□ -0.44
VPS16-202ENST00000380445 CHERPQ8IWX8 916 aaKnown RBP12.29□□□□□ -0.44
VPS16-202ENST00000380445 GLMNQ92990 594 aa12.29□□□□□ -0.44
VPS16-202ENST00000380445 ZNF707Q96C28 371 aaPredicted RBP12.29□□□□□ -0.44
VPS16-202ENST00000380445 BIRC7Q96CA5 298 aa12.29□□□□□ -0.44
VPS16-202ENST00000380445 CCDC138Q96M89 665 aa12.29□□□□□ -0.44
VPS16-202ENST00000380445 FOPNLQ96NB1 174 aa12.29□□□□□ -0.44
VPS16-202ENST00000380445 OR52E6Q96RD3 313 aa12.29□□□□□ -0.44
VPS16-202ENST00000380445 CCM2Q9BSQ5 444 aa12.29□□□□□ -0.44
VPS16-202ENST00000380445 EPB41L1Q9H4G0 881 aa12.29□□□□□ -0.44
VPS16-202ENST00000380445 RMND5AQ9H871 391 aa12.29□□□□□ -0.44
VPS16-202ENST00000380445 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.29□□□□□ -0.44
VPS16-202ENST00000380445 PADI4Q9UM07 663 aa12.29□□□□□ -0.44
VPS16-202ENST00000380445 ZFC3H1O60293 1989 aaKnown RBP12.29□□□□□ -0.44
VPS16-202ENST00000380445 PLXNA2O75051 1894 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 150.3 ms