RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 KATNAL2Q8IYT4 538 aa17.07■□□□□ 0.32
PDLIM4-202ENST00000379018 RCOR2Q8IZ40 523 aa17.07■□□□□ 0.32
PDLIM4-202ENST00000379018 DTWD1Q8N5C7 304 aa17.07■□□□□ 0.32
PDLIM4-202ENST00000379018 BCORP1Q8N888 145 aa17.07■□□□□ 0.32
PDLIM4-202ENST00000379018 OR1N1Q8NGS0 311 aa17.07■□□□□ 0.32
PDLIM4-202ENST00000379018 FKBP10Q96AY3 582 aa17.07■□□□□ 0.32
PDLIM4-202ENST00000379018 SPSB2Q99619 263 aa17.07■□□□□ 0.32
PDLIM4-202ENST00000379018 RUBCNLQ9H714 662 aa17.07■□□□□ 0.32
PDLIM4-202ENST00000379018 CUTCQ9NTM9 273 aa17.07■□□□□ 0.32
PDLIM4-202ENST00000379018 PIH1D1Q9NWS0 290 aaKnown RBP17.07■□□□□ 0.32
PDLIM4-202ENST00000379018 OR6C2Q9NZP2 312 aa17.07■□□□□ 0.32
PDLIM4-202ENST00000379018 POLG2Q9UHN1 485 aa17.07■□□□□ 0.32
PDLIM4-202ENST00000379018 OTOGQ6ZRI0 2925 aa17.07■□□□□ 0.32
PDLIM4-202ENST00000379018 TRBV5-4A0A0C4DH59 114 aa17.06■□□□□ 0.32
PDLIM4-202ENST00000379018 OR51F1A6NGY5 319 aa17.06■□□□□ 0.32
PDLIM4-202ENST00000379018 APOC4-APOC2K7ER74 178 aa17.06■□□□□ 0.32
PDLIM4-202ENST00000379018 STK10O94804 968 aaKnown RBP17.06■□□□□ 0.32
PDLIM4-202ENST00000379018 APOC2P02655 101 aa17.06■□□□□ 0.32
PDLIM4-202ENST00000379018 TPM3P06753 285 aa17.06■□□□□ 0.32
PDLIM4-202ENST00000379018 UQCRHP07919 91 aa17.06■□□□□ 0.32
PDLIM4-202ENST00000379018 ACADLP28330 430 aa17.06■□□□□ 0.32
PDLIM4-202ENST00000379018 ARG2P78540 354 aa17.06■□□□□ 0.32
PDLIM4-202ENST00000379018 OTUD4Q01804 1114 aaKnown RBP17.06■□□□□ 0.32
PDLIM4-202ENST00000379018 SRSF11Q05519 484 aaKnown RBP17.06■□□□□ 0.32
PDLIM4-202ENST00000379018 MSLNQ13421 630 aaPredicted RBP17.06■□□□□ 0.32
PDLIM4-202ENST00000379018 POU6F1Q14863 301 aa17.06■□□□□ 0.32
PDLIM4-202ENST00000379018 B3GNTL1Q67FW5 361 aaPredicted RBP17.06■□□□□ 0.32
PDLIM4-202ENST00000379018 DENND5AQ6IQ26 1287 aa17.06■□□□□ 0.32
PDLIM4-202ENST00000379018 DARS2Q6PI48 645 aaKnown RBP17.06■□□□□ 0.32
PDLIM4-202ENST00000379018 IGFL2Q6UWQ7 119 aa17.06■□□□□ 0.32
PDLIM4-202ENST00000379018 ISLR2Q6UXK2 745 aa17.06■□□□□ 0.32
PDLIM4-202ENST00000379018 BBS12Q6ZW61 710 aa17.06■□□□□ 0.32
PDLIM4-202ENST00000379018 COX15Q7KZN9 410 aa17.06■□□□□ 0.32
PDLIM4-202ENST00000379018 OVCH1Q7RTY7 1134 aa17.06■□□□□ 0.32
PDLIM4-202ENST00000379018 CDKL3Q8IVW4 592 aaPredicted RBP17.06■□□□□ 0.32
PDLIM4-202ENST00000379018 OR5K2Q8NHB8 316 aa17.06■□□□□ 0.32
PDLIM4-202ENST00000379018 CFAP61Q8NHU2 1237 aa17.06■□□□□ 0.32
PDLIM4-202ENST00000379018 ACTL9Q8TC94 416 aa17.06■□□□□ 0.32
PDLIM4-202ENST00000379018 COG1Q8WTW3 980 aa17.06■□□□□ 0.32
PDLIM4-202ENST00000379018 KRT35Q92764 455 aa17.06■□□□□ 0.32
PDLIM4-202ENST00000379018 CHRNA10Q9GZZ6 450 aa17.06■□□□□ 0.32
PDLIM4-202ENST00000379018 ABHD10Q9NUJ1 306 aa17.06■□□□□ 0.32
PDLIM4-202ENST00000379018 SH3BGRL2Q9UJC5 107 aa17.06■□□□□ 0.32
PDLIM4-202ENST00000379018 ITGB1BP2Q9UKP3 347 aa17.06■□□□□ 0.32
PDLIM4-202ENST00000379018 KLHL18O94889 574 aa17.05■□□□□ 0.32
PDLIM4-202ENST00000379018 AP2A2O94973 939 aa17.05■□□□□ 0.32
PDLIM4-202ENST00000379018 AP2A1O95782 977 aa17.05■□□□□ 0.32
PDLIM4-202ENST00000379018 F10P00742 488 aa17.05■□□□□ 0.32
PDLIM4-202ENST00000379018 FTH1P02794 183 aa17.05■□□□□ 0.32
PDLIM4-202ENST00000379018 STSP08842 583 aa17.05■□□□□ 0.32
PDLIM4-202ENST00000379018 TPM1P09493 284 aa17.05■□□□□ 0.32
PDLIM4-202ENST00000379018 PIM1P11309 404 aaPredicted RBP17.05■□□□□ 0.32
PDLIM4-202ENST00000379018 ARSFP54793 590 aa17.05■□□□□ 0.32
PDLIM4-202ENST00000379018 RIPPLY3P57055 190 aa17.05■□□□□ 0.32
PDLIM4-202ENST00000379018 EIF3EP60228 445 aaKnown RBP17.05■□□□□ 0.32
PDLIM4-202ENST00000379018 CACNG1Q06432 222 aa17.05■□□□□ 0.32
PDLIM4-202ENST00000379018 Q0VFX4 171 aa17.05■□□□□ 0.32
PDLIM4-202ENST00000379018 KIR2DS3Q14952 304 aa17.05■□□□□ 0.32
PDLIM4-202ENST00000379018 TMTC1Q8IUR5 882 aa17.05■□□□□ 0.32
PDLIM4-202ENST00000379018 TTC29Q8NA56 475 aaPredicted RBP17.05■□□□□ 0.32
PDLIM4-202ENST00000379018 C8orf44Q96CB5 159 aa17.05■□□□□ 0.32
PDLIM4-202ENST00000379018 IL17FQ96PD4 163 aa17.05■□□□□ 0.32
PDLIM4-202ENST00000379018 ALS2CR12Q96Q35 445 aa17.05■□□□□ 0.32
PDLIM4-202ENST00000379018 SLX1AQ9BQ83 275 aa17.05■□□□□ 0.32
PDLIM4-202ENST00000379018 WDR54Q9H977 334 aa17.05■□□□□ 0.32
PDLIM4-202ENST00000379018 MRM3Q9HC36 420 aaKnown RBP17.05■□□□□ 0.32
PDLIM4-202ENST00000379018 ZNF160Q9HCG1 818 aa17.05■□□□□ 0.32
PDLIM4-202ENST00000379018 NLE1Q9NVX2 485 aaPredicted RBP17.05■□□□□ 0.32
PDLIM4-202ENST00000379018 PLA2G3Q9NZ20 509 aa17.05■□□□□ 0.32
PDLIM4-202ENST00000379018 PKDREJQ9NTG1 2253 aa17.05■□□□□ 0.32
PDLIM4-202ENST00000379018 TRGV8A0A0C4DH27 118 aa17.04■□□□□ 0.32
PDLIM4-202ENST00000379018 BHMG1C9JSJ3 638 aaPredicted RBP17.04■□□□□ 0.32
PDLIM4-202ENST00000379018 DSCR3O14972 297 aa17.04■□□□□ 0.32
PDLIM4-202ENST00000379018 KDM1AO60341 852 aa17.04■□□□□ 0.32
PDLIM4-202ENST00000379018 RBP3P10745 1247 aa17.04■□□□□ 0.32
PDLIM4-202ENST00000379018 PKLRP30613 574 aa17.04■□□□□ 0.32
PDLIM4-202ENST00000379018 MFAP5Q13361 173 aa17.04■□□□□ 0.32
PDLIM4-202ENST00000379018 TRIM14Q14142 442 aa17.04■□□□□ 0.32
PDLIM4-202ENST00000379018 ZXDCQ2QGD7 858 aaPredicted RBP17.04■□□□□ 0.32
PDLIM4-202ENST00000379018 GFRALQ6UXV0 394 aa17.04■□□□□ 0.32
PDLIM4-202ENST00000379018 ARHGEF18Q6ZSZ5 1173 aa17.04■□□□□ 0.32
PDLIM4-202ENST00000379018 TAB3Q8N5C8 712 aaPredicted RBP17.04■□□□□ 0.32
PDLIM4-202ENST00000379018 OR11G2Q8NGC1 345 aa17.04■□□□□ 0.32
PDLIM4-202ENST00000379018 LRRC45Q96CN5 670 aa17.04■□□□□ 0.32
PDLIM4-202ENST00000379018 SPATA13Q96N96 652 aa17.04■□□□□ 0.32
PDLIM4-202ENST00000379018 CRB3Q9BUF7 120 aa17.04■□□□□ 0.32
PDLIM4-202ENST00000379018 PTGFRNQ9P2B2 879 aa17.04■□□□□ 0.32
PDLIM4-202ENST00000379018 TFR2Q9UP52 801 aa17.04■□□□□ 0.32
PDLIM4-202ENST00000379018 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.04■□□□□ 0.32
PDLIM4-202ENST00000379018 FBN2P35556 2912 aa17.04■□□□□ 0.32
PDLIM4-202ENST00000379018 ALBP02768 609 aa17.03■□□□□ 0.32
PDLIM4-202ENST00000379018 GSTM1P09488 218 aa17.03■□□□□ 0.32
PDLIM4-202ENST00000379018 MSNP26038 577 aaKnown RBP17.03■□□□□ 0.32
PDLIM4-202ENST00000379018 NSG1P42857 185 aa17.03■□□□□ 0.32
PDLIM4-202ENST00000379018 GSTM4Q03013 218 aa17.03■□□□□ 0.32
PDLIM4-202ENST00000379018 CDKN2AIPNLQ96HQ2 116 aa17.03■□□□□ 0.32
PDLIM4-202ENST00000379018 VPS50Q96JG6 964 aa17.03■□□□□ 0.32
PDLIM4-202ENST00000379018 SELENOSQ9BQE4 189 aa17.03■□□□□ 0.32
PDLIM4-202ENST00000379018 SEMA3GQ9NS98 782 aa17.03■□□□□ 0.32
PDLIM4-202ENST00000379018 SUCOQ9UBS9 1254 aaKnown RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms