RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 ZNF768Q9H5H4 540 aaKnown RBP18.13■□□□□ 0.49
SSU72-203ENST00000378725 SNX15Q9NRS6 342 aa18.13■□□□□ 0.49
SSU72-203ENST00000378725 C1GALT1Q9NS00 363 aa18.13■□□□□ 0.49
SSU72-203ENST00000378725 KLHL3Q9UH77 587 aa18.13■□□□□ 0.49
SSU72-203ENST00000378725 SPEGQ15772 3267 aa18.12■□□□□ 0.49
SSU72-203ENST00000378725 IGHV5-51A0A0C4DH38 117 aa18.12■□□□□ 0.49
SSU72-203ENST00000378725 GSAPA4D1B5 854 aa18.12■□□□□ 0.49
SSU72-203ENST00000378725 TRABD2BA6NFA1 517 aa18.12■□□□□ 0.49
SSU72-203ENST00000378725 TLCD2A6NGC4 264 aa18.12■□□□□ 0.49
SSU72-203ENST00000378725 CDC7O00311 574 aa18.12■□□□□ 0.49
SSU72-203ENST00000378725 SLC16A8O95907 504 aa18.12■□□□□ 0.49
SSU72-203ENST00000378725 ALDOAP04075 364 aaKnown RBP18.12■□□□□ 0.49
SSU72-203ENST00000378725 SHBGP04278 402 aa18.12■□□□□ 0.49
SSU72-203ENST00000378725 C2P06681 752 aa18.12■□□□□ 0.49
SSU72-203ENST00000378725 SNRPAP09012 282 aaKnown RBP18.12■□□□□ 0.49
SSU72-203ENST00000378725 ENO2P09104 434 aaPredicted RBP18.12■□□□□ 0.49
SSU72-203ENST00000378725 LSSP48449 732 aa18.12■□□□□ 0.49
SSU72-203ENST00000378725 LGSNQ5TDP6 509 aa18.12■□□□□ 0.49
SSU72-203ENST00000378725 SBSNQ6UWP8 590 aa18.12■□□□□ 0.49
SSU72-203ENST00000378725 RAPH1Q70E73 1250 aa18.12■□□□□ 0.49
SSU72-203ENST00000378725 KMT5CQ86Y97 462 aa18.12■□□□□ 0.49
SSU72-203ENST00000378725 MREGQ8N565 214 aa18.12■□□□□ 0.49
SSU72-203ENST00000378725 LMNTD1Q8N9Z9 388 aa18.12■□□□□ 0.49
SSU72-203ENST00000378725 ZNF480Q8WV37 535 aa18.12■□□□□ 0.49
SSU72-203ENST00000378725 SLC22A18Q96BI1 424 aa18.12■□□□□ 0.49
SSU72-203ENST00000378725 SLC41A2Q96JW4 573 aa18.12■□□□□ 0.49
SSU72-203ENST00000378725 PITPNM3Q9BZ71 974 aa18.12■□□□□ 0.49
SSU72-203ENST00000378725 POLR1BQ9H9Y6 1135 aa18.12■□□□□ 0.49
SSU72-203ENST00000378725 PPCSQ9HAB8 311 aa18.12■□□□□ 0.49
SSU72-203ENST00000378725 AKAP7Q9P0M2 348 aaPredicted RBP18.12■□□□□ 0.49
SSU72-203ENST00000378725 SATB2Q9UPW6 733 aa18.12■□□□□ 0.49
SSU72-203ENST00000378725 ACOT9Q9Y305 439 aa18.12■□□□□ 0.49
SSU72-203ENST00000378725 LOXL2Q9Y4K0 774 aa18.12■□□□□ 0.49
SSU72-203ENST00000378725 PCDHGA8Q9Y5G5 932 aa18.12■□□□□ 0.49
SSU72-203ENST00000378725 A0A087X1B8 175 aa18.11■□□□□ 0.49
SSU72-203ENST00000378725 A0A1W2PPV9 198 aa18.11■□□□□ 0.49
SSU72-203ENST00000378725 ZNF839A8K0R7 811 aa18.11■□□□□ 0.49
SSU72-203ENST00000378725 PLD2O14939 933 aa18.11■□□□□ 0.49
SSU72-203ENST00000378725 RASSF9O75901 435 aa18.11■□□□□ 0.49
SSU72-203ENST00000378725 KRT37O76014 449 aa18.11■□□□□ 0.49
SSU72-203ENST00000378725 HIST1H2AGP0C0S8 130 aaPredicted RBP18.11■□□□□ 0.49
SSU72-203ENST00000378725 CD1DP15813 335 aa18.11■□□□□ 0.49
SSU72-203ENST00000378725 UGT2B7P16662 529 aa18.11■□□□□ 0.49
SSU72-203ENST00000378725 HIST1H2ADP20671 130 aa18.11■□□□□ 0.49
SSU72-203ENST00000378725 TYK2P29597 1187 aa18.11■□□□□ 0.49
SSU72-203ENST00000378725 CSTF2P33240 577 aaKnown RBP eCLIP18.11■□□□□ 0.49
SSU72-203ENST00000378725 SERPINB8P50452 374 aa18.11■□□□□ 0.49
SSU72-203ENST00000378725 PNLIPRP1P54315 467 aa18.11■□□□□ 0.49
SSU72-203ENST00000378725 AP1S2P56377 157 aa18.11■□□□□ 0.49
SSU72-203ENST00000378725 ATP6V0D1P61421 351 aa18.11■□□□□ 0.49
SSU72-203ENST00000378725 DLG1Q12959 904 aa18.11■□□□□ 0.49
SSU72-203ENST00000378725 FASTKQ14296 549 aaKnown RBP18.11■□□□□ 0.49
SSU72-203ENST00000378725 PPP1R3AQ16821 1122 aa18.11■□□□□ 0.49
SSU72-203ENST00000378725 SLC5A12Q1EHB4 618 aa18.11■□□□□ 0.49
SSU72-203ENST00000378725 IGF2-ASQ6U949 168 aa18.11■□□□□ 0.49
SSU72-203ENST00000378725 SPESP1Q6UW49 350 aa18.11■□□□□ 0.49
SSU72-203ENST00000378725 TIFABQ6ZNK6 161 aa18.11■□□□□ 0.49
SSU72-203ENST00000378725 LRRC56Q8IYG6 542 aaPredicted RBP18.11■□□□□ 0.49
SSU72-203ENST00000378725 FBXO39Q8N4B4 442 aa18.11■□□□□ 0.49
SSU72-203ENST00000378725 SPATA6LQ8N4H0 392 aa18.11■□□□□ 0.49
SSU72-203ENST00000378725 C2orf73Q8N5S3 287 aaPredicted RBP18.11■□□□□ 0.49
SSU72-203ENST00000378725 MTBPQ96DY7 904 aa18.11■□□□□ 0.49
SSU72-203ENST00000378725 HIST1H2AHQ96KK5 128 aa18.11■□□□□ 0.49
SSU72-203ENST00000378725 PPM1MQ96MI6 270 aa18.11■□□□□ 0.49
SSU72-203ENST00000378725 HIST1H2AJQ99878 128 aa18.11■□□□□ 0.49
SSU72-203ENST00000378725 H2AFJQ9BTM1 129 aa18.11■□□□□ 0.49
SSU72-203ENST00000378725 TRIM54Q9BYV2 358 aa18.11■□□□□ 0.49
SSU72-203ENST00000378725 CTNNAL1Q9UBT7 734 aa18.11■□□□□ 0.49
SSU72-203ENST00000378725 TLK1Q9UKI8 766 aa18.11■□□□□ 0.49
SSU72-203ENST00000378725 UNC13CQ8NB66 2214 aa18.11■□□□□ 0.49
SSU72-203ENST00000378725 A0A096LPK6 155 aa18.1■□□□□ 0.49
SSU72-203ENST00000378725 ISM1B1AKI9 464 aa18.1■□□□□ 0.49
SSU72-203ENST00000378725 TRIM49D1C9J1S8 452 aa18.1■□□□□ 0.49
SSU72-203ENST00000378725 E7ENX8 843 aa18.1■□□□□ 0.49
SSU72-203ENST00000378725 SYF2O95926 243 aaKnown RBP18.1■□□□□ 0.49
SSU72-203ENST00000378725 NUDT17P0C025 328 aa18.1■□□□□ 0.49
SSU72-203ENST00000378725 NELFEP18615 380 aaKnown RBP18.1■□□□□ 0.49
SSU72-203ENST00000378725 IMPA1P29218 277 aa18.1■□□□□ 0.49
SSU72-203ENST00000378725 TAP2Q03519 686 aa18.1■□□□□ 0.49
SSU72-203ENST00000378725 CSHL1Q14406 222 aa18.1■□□□□ 0.49
SSU72-203ENST00000378725 RASA2Q15283 850 aa18.1■□□□□ 0.49
SSU72-203ENST00000378725 TSNQ15631 228 aaKnown RBP18.1■□□□□ 0.49
SSU72-203ENST00000378725 C3orf38Q5JPI3 329 aa18.1■□□□□ 0.49
SSU72-203ENST00000378725 TBC1D1Q86TI0 1168 aaPredicted RBP18.1■□□□□ 0.49
SSU72-203ENST00000378725 TDRPQ86YL5 185 aa18.1■□□□□ 0.49
SSU72-203ENST00000378725 BMPERQ8N8U9 685 aa18.1■□□□□ 0.49
SSU72-203ENST00000378725 SMPDL3AQ92484 453 aa18.1■□□□□ 0.49
SSU72-203ENST00000378725 GATA6Q92908 595 aa18.1■□□□□ 0.49
SSU72-203ENST00000378725 KIAA1191Q96A73 305 aa18.1■□□□□ 0.49
SSU72-203ENST00000378725 TMEM121BQ9BXQ6 578 aaPredicted RBP18.1■□□□□ 0.49
SSU72-203ENST00000378725 IGSF5Q9NSI5 407 aa18.1■□□□□ 0.49
SSU72-203ENST00000378725 STOX2Q9P2F5 926 aaPredicted RBP18.1■□□□□ 0.49
SSU72-203ENST00000378725 PSMC3IPQ9P2W1 217 aaPredicted RBP18.1■□□□□ 0.49
SSU72-203ENST00000378725 OARD1Q9Y530 152 aa18.1■□□□□ 0.49
SSU72-203ENST00000378725 PMS2P1A4D2B8 440 aa18.09■□□□□ 0.49
SSU72-203ENST00000378725 NPEPPSL1A6NEC2 478 aa18.09■□□□□ 0.49
SSU72-203ENST00000378725 B4E171 279 aa18.09■□□□□ 0.49
SSU72-203ENST00000378725 DXOO77932 396 aaKnown RBP18.09■□□□□ 0.49
SSU72-203ENST00000378725 FKBP9O95302 570 aa18.09■□□□□ 0.49
SSU72-203ENST00000378725 ZBTB11O95625 1053 aaPredicted RBP18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms