RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 CARTPTQ16568 116 aa13.86□□□□□ -0.19
SHROOM1-203ENST00000378679 PROSER1Q86XN7 944 aa13.86□□□□□ -0.19
SHROOM1-203ENST00000378679 MDGA1Q8NFP4 955 aa13.86□□□□□ -0.19
SHROOM1-203ENST00000378679 BCL7CQ8WUZ0 217 aaPredicted RBP13.86□□□□□ -0.19
SHROOM1-203ENST00000378679 FGF13Q92913 245 aa13.86□□□□□ -0.19
SHROOM1-203ENST00000378679 ZBTB26Q9HCK0 441 aa13.86□□□□□ -0.19
SHROOM1-203ENST00000378679 TREX1Q9NSU2 369 aa13.86□□□□□ -0.19
SHROOM1-203ENST00000378679 PCDH10Q9P2E7 1040 aa13.86□□□□□ -0.19
SHROOM1-203ENST00000378679 CORO2BQ9UQ03 480 aa13.86□□□□□ -0.19
SHROOM1-203ENST00000378679 SAMHD1Q9Y3Z3 626 aaKnown RBP13.86□□□□□ -0.19
SHROOM1-203ENST00000378679 IL6P05231 212 aa13.86□□□□□ -0.19
SHROOM1-203ENST00000378679 PFKLP17858 780 aa13.86□□□□□ -0.19
SHROOM1-203ENST00000378679 NR4A1P22736 598 aa13.86□□□□□ -0.19
SHROOM1-203ENST00000378679 IDH2P48735 452 aaKnown RBP13.86□□□□□ -0.19
SHROOM1-203ENST00000378679 OR4D1Q15615 310 aa13.86□□□□□ -0.19
SHROOM1-203ENST00000378679 TLDC1Q6P9B6 456 aa13.86□□□□□ -0.19
SHROOM1-203ENST00000378679 LRRC70Q7Z2Q7 622 aa13.86□□□□□ -0.19
SHROOM1-203ENST00000378679 THOC6Q86W42 341 aaKnown RBP13.86□□□□□ -0.19
SHROOM1-203ENST00000378679 SRFBP1Q8NEF9 429 aaKnown RBP13.86□□□□□ -0.19
SHROOM1-203ENST00000378679 XAGE5Q8WWM1 108 aa13.86□□□□□ -0.19
SHROOM1-203ENST00000378679 CD244Q9BZW8 370 aa13.86□□□□□ -0.19
SHROOM1-203ENST00000378679 BTBD1Q9H0C5 482 aa13.86□□□□□ -0.19
SHROOM1-203ENST00000378679 KLHL3Q9UH77 587 aa13.86□□□□□ -0.19
SHROOM1-203ENST00000378679 ANGPT4Q9Y264 503 aa13.86□□□□□ -0.19
SHROOM1-203ENST00000378679 SCN1AP35498 2009 aa13.86□□□□□ -0.19
SHROOM1-203ENST00000378679 LOXHD1Q8IVV2 1947 aa13.86□□□□□ -0.19
SHROOM1-203ENST00000378679 GRID2O43424 1007 aa13.86□□□□□ -0.19
SHROOM1-203ENST00000378679 OR10H2O60403 315 aa13.86□□□□□ -0.19
SHROOM1-203ENST00000378679 IFNA16P05015 189 aa13.86□□□□□ -0.19
SHROOM1-203ENST00000378679 OCM2P0CE71 109 aa13.86□□□□□ -0.19
SHROOM1-203ENST00000378679 OCMP0CE72 109 aaPredicted RBP13.86□□□□□ -0.19
SHROOM1-203ENST00000378679 EIF2B5Q13144 721 aaKnown RBP13.86□□□□□ -0.19
SHROOM1-203ENST00000378679 ITGADQ13349 1161 aa13.86□□□□□ -0.19
SHROOM1-203ENST00000378679 TJAP1Q5JTD0 557 aa13.86□□□□□ -0.19
SHROOM1-203ENST00000378679 GIPC3Q8TF64 312 aa13.86□□□□□ -0.19
SHROOM1-203ENST00000378679 ZBP1Q9H171 429 aa13.86□□□□□ -0.19
SHROOM1-203ENST00000378679 KRT84Q9NSB2 600 aa13.86□□□□□ -0.19
SHROOM1-203ENST00000378679 DNMT3BQ9UBC3 853 aaKnown RBP13.86□□□□□ -0.19
SHROOM1-203ENST00000378679 G3V2L1 256 aa13.85□□□□□ -0.19
SHROOM1-203ENST00000378679 AXIN1O15169 862 aa13.85□□□□□ -0.19
SHROOM1-203ENST00000378679 CMPK1P30085 196 aa13.85□□□□□ -0.19
SHROOM1-203ENST00000378679 DGKEP52429 567 aa13.85□□□□□ -0.19
SHROOM1-203ENST00000378679 PNLIPRP1P54315 467 aa13.85□□□□□ -0.19
SHROOM1-203ENST00000378679 UFM1P61960 85 aa13.85□□□□□ -0.19
SHROOM1-203ENST00000378679 HERC3Q15034 1050 aa13.85□□□□□ -0.19
SHROOM1-203ENST00000378679 PRAMEF14Q5SWL7 426 aa13.85□□□□□ -0.19
SHROOM1-203ENST00000378679 PRAMEF13Q5VWM6 474 aa13.85□□□□□ -0.19
SHROOM1-203ENST00000378679 KLHL35Q6PF15 583 aa13.85□□□□□ -0.19
SHROOM1-203ENST00000378679 SUSD1Q6UWL2 747 aa13.85□□□□□ -0.19
SHROOM1-203ENST00000378679 PLD3Q8IV08 490 aa13.85□□□□□ -0.19
SHROOM1-203ENST00000378679 ZNF780BQ9Y6R6 833 aa13.85□□□□□ -0.19
SHROOM1-203ENST00000378679 E7ENX8 843 aa13.85□□□□□ -0.19
SHROOM1-203ENST00000378679 SUV39H1O43463 412 aa13.85□□□□□ -0.19
SHROOM1-203ENST00000378679 G6PDP11413 515 aa13.85□□□□□ -0.19
SHROOM1-203ENST00000378679 ARSAP15289 507 aa13.85□□□□□ -0.19
SHROOM1-203ENST00000378679 GPAT3Q53EU6 434 aa13.85□□□□□ -0.19
SHROOM1-203ENST00000378679 TTC23Q5W5X9 447 aa13.85□□□□□ -0.19
SHROOM1-203ENST00000378679 C16orf62Q7Z3J2 963 aa13.85□□□□□ -0.19
SHROOM1-203ENST00000378679 CWH43Q9H720 699 aa13.85□□□□□ -0.19
SHROOM1-203ENST00000378679 C3orf18Q9UK00 162 aa13.85□□□□□ -0.19
SHROOM1-203ENST00000378679 MAN1A2O60476 641 aa13.85□□□□□ -0.19
SHROOM1-203ENST00000378679 AP2A2O94973 939 aa13.85□□□□□ -0.19
SHROOM1-203ENST00000378679 UQCRBP14927 111 aa13.85□□□□□ -0.19
SHROOM1-203ENST00000378679 HOXC13P31276 330 aa13.85□□□□□ -0.19
SHROOM1-203ENST00000378679 GRIA2P42262 883 aa13.85□□□□□ -0.19
SHROOM1-203ENST00000378679 PSMD7P51665 324 aa13.85□□□□□ -0.19
SHROOM1-203ENST00000378679 SGSHP51688 502 aa13.85□□□□□ -0.19
SHROOM1-203ENST00000378679 LSM3P62310 102 aaKnown RBP13.85□□□□□ -0.19
SHROOM1-203ENST00000378679 SRSF11Q05519 484 aaKnown RBP13.85□□□□□ -0.19
SHROOM1-203ENST00000378679 DLG1Q12959 904 aa13.85□□□□□ -0.19
SHROOM1-203ENST00000378679 MBOAT1Q6ZNC8 495 aa13.85□□□□□ -0.19
SHROOM1-203ENST00000378679 ADCK1Q86TW2 530 aa13.85□□□□□ -0.19
SHROOM1-203ENST00000378679 PGBD5Q8N414 524 aa13.85□□□□□ -0.19
SHROOM1-203ENST00000378679 TSPAN14Q8NG11 270 aa13.85□□□□□ -0.19
SHROOM1-203ENST00000378679 SPPL3Q8TCT6 385 aa13.85□□□□□ -0.19
SHROOM1-203ENST00000378679 PCBD2Q9H0N5 130 aa13.85□□□□□ -0.19
SHROOM1-203ENST00000378679 SRMSQ9H3Y6 488 aa13.85□□□□□ -0.19
SHROOM1-203ENST00000378679 RIMKLBQ9ULI2 386 aa13.85□□□□□ -0.19
SHROOM1-203ENST00000378679 CCL26Q9Y258 94 aa13.85□□□□□ -0.19
SHROOM1-203ENST00000378679 ITM2BQ9Y287 266 aa13.85□□□□□ -0.19
SHROOM1-203ENST00000378679 CXCL10P02778 98 aa13.84□□□□□ -0.19
SHROOM1-203ENST00000378679 ENO2P09104 434 aaPredicted RBP13.84□□□□□ -0.19
SHROOM1-203ENST00000378679 EBLN1P0CF75 366 aa13.84□□□□□ -0.19
SHROOM1-203ENST00000378679 HOXC8P31273 242 aa13.84□□□□□ -0.19
SHROOM1-203ENST00000378679 MAGEA3P43357 314 aa13.84□□□□□ -0.19
SHROOM1-203ENST00000378679 RXRGP48443 463 aa13.84□□□□□ -0.19
SHROOM1-203ENST00000378679 ZC3H12BQ5HYM0 836 aaKnown RBP13.84□□□□□ -0.19
SHROOM1-203ENST00000378679 SNAP47Q5SQN1 464 aa13.84□□□□□ -0.19
SHROOM1-203ENST00000378679 TRAM1L1Q8N609 369 aa13.84□□□□□ -0.19
SHROOM1-203ENST00000378679 C1orf52Q8N6N3 182 aaKnown RBP13.84□□□□□ -0.19
SHROOM1-203ENST00000378679 TSTD1Q8NFU3 115 aa13.84□□□□□ -0.19
SHROOM1-203ENST00000378679 TAC3Q9UHF0 121 aa13.84□□□□□ -0.19
SHROOM1-203ENST00000378679 PLK4O00444 970 aa13.84□□□□□ -0.19
SHROOM1-203ENST00000378679 PCDH7O60245 1069 aa13.84□□□□□ -0.19
SHROOM1-203ENST00000378679 SNNO75324 88 aaPredicted RBP13.84□□□□□ -0.19
SHROOM1-203ENST00000378679 CCNDBP1O95273 360 aa13.84□□□□□ -0.19
SHROOM1-203ENST00000378679 ATXN1LP0C7T5 689 aaKnown RBP13.84□□□□□ -0.19
SHROOM1-203ENST00000378679 PLEKHS1Q5SXH7 462 aa13.84□□□□□ -0.19
SHROOM1-203ENST00000378679 ADCY4Q8NFM4 1077 aa13.84□□□□□ -0.19
SHROOM1-203ENST00000378679 LRRC58Q96CX6 371 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms