RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 ZNF778Q96MU6 729 aa14.72□□□□□ -0.05
NPHP4-201ENST00000378156 RIOK2Q9BVS4 552 aaKnown RBP14.72□□□□□ -0.05
NPHP4-201ENST00000378156 PCBD2Q9H0N5 130 aa14.72□□□□□ -0.05
NPHP4-201ENST00000378156 PFDN2Q9UHV9 154 aa14.72□□□□□ -0.05
NPHP4-201ENST00000378156 PHF11Q9UIL8 331 aa14.72□□□□□ -0.05
NPHP4-201ENST00000378156 TFECO14948 347 aaPredicted RBP14.72□□□□□ -0.05
NPHP4-201ENST00000378156 PDSS2Q86YH6 399 aa14.72□□□□□ -0.05
NPHP4-201ENST00000378156 MMAAQ8IVH4 418 aaKnown RBP14.72□□□□□ -0.05
NPHP4-201ENST00000378156 ZNF366Q8N895 744 aa14.72□□□□□ -0.05
NPHP4-201ENST00000378156 DCLK1O15075 740 aa14.72□□□□□ -0.05
NPHP4-201ENST00000378156 CLDN7O95471 211 aa14.72□□□□□ -0.05
NPHP4-201ENST00000378156 EPOP01588 193 aa14.72□□□□□ -0.05
NPHP4-201ENST00000378156 GDI1P31150 447 aa14.72□□□□□ -0.05
NPHP4-201ENST00000378156 IRF5Q13568 498 aa14.72□□□□□ -0.05
NPHP4-201ENST00000378156 TOMM20Q15388 145 aa14.72□□□□□ -0.05
NPHP4-201ENST00000378156 HKDC1Q2TB90 917 aa14.72□□□□□ -0.05
NPHP4-201ENST00000378156 DPY19L2P1Q6NXN4 242 aa14.72□□□□□ -0.05
NPHP4-201ENST00000378156 CEP68Q76N32 757 aa14.72□□□□□ -0.05
NPHP4-201ENST00000378156 TMEM40Q8WWA1 233 aa14.72□□□□□ -0.05
NPHP4-201ENST00000378156 IL36AQ9UHA7 158 aa14.72□□□□□ -0.05
NPHP4-201ENST00000378156 CHURC1-FNTBB4DL54 471 aa14.71□□□□□ -0.05
NPHP4-201ENST00000378156 CDC7O00311 574 aa14.71□□□□□ -0.05
NPHP4-201ENST00000378156 CHRNA1P02708 482 aa14.71□□□□□ -0.05
NPHP4-201ENST00000378156 GHRHRQ02643 423 aa14.71□□□□□ -0.05
NPHP4-201ENST00000378156 HEPACAMQ14CZ8 416 aa14.71□□□□□ -0.05
NPHP4-201ENST00000378156 NADK2Q4G0N4 442 aa14.71□□□□□ -0.05
NPHP4-201ENST00000378156 TPRG1Q6ZUI0 275 aa14.71□□□□□ -0.05
NPHP4-201ENST00000378156 FAM220AQ7Z4H9 259 aa14.71□□□□□ -0.05
NPHP4-201ENST00000378156 GRASPQ7Z6J2 395 aaPredicted RBP14.71□□□□□ -0.05
NPHP4-201ENST00000378156 HID1Q8IV36 788 aa14.71□□□□□ -0.05
NPHP4-201ENST00000378156 ARL10Q8N8L6 244 aa14.71□□□□□ -0.05
NPHP4-201ENST00000378156 MINDY2Q8NBR6 621 aa14.71□□□□□ -0.05
NPHP4-201ENST00000378156 BPIFB1Q8TDL5 484 aa14.71□□□□□ -0.05
NPHP4-201ENST00000378156 LRRC58Q96CX6 371 aa14.71□□□□□ -0.05
NPHP4-201ENST00000378156 TSGA13Q96PP4 275 aa14.71□□□□□ -0.05
NPHP4-201ENST00000378156 SLC2A13Q96QE2 648 aa14.71□□□□□ -0.05
NPHP4-201ENST00000378156 POLMQ9NP87 494 aaPredicted RBP14.71□□□□□ -0.05
NPHP4-201ENST00000378156 IFT80Q9P2H3 777 aaPredicted RBP14.71□□□□□ -0.05
NPHP4-201ENST00000378156 PCDHGB3Q9Y5G1 929 aa14.71□□□□□ -0.05
NPHP4-201ENST00000378156 DGKBQ9Y6T7 804 aa14.71□□□□□ -0.05
NPHP4-201ENST00000378156 MYADML2A6NDP7 307 aa14.71□□□□□ -0.05
NPHP4-201ENST00000378156 SCAMP1O15126 338 aa14.71□□□□□ -0.05
NPHP4-201ENST00000378156 CNMDO75829 334 aa14.71□□□□□ -0.05
NPHP4-201ENST00000378156 S100A6P06703 90 aa14.71□□□□□ -0.05
NPHP4-201ENST00000378156 SLC35G6P0C7Q6 338 aa14.71□□□□□ -0.05
NPHP4-201ENST00000378156 IGFBP5P24593 272 aa14.71□□□□□ -0.05
NPHP4-201ENST00000378156 FAM92BQ6ZTR7 304 aa14.71□□□□□ -0.05
NPHP4-201ENST00000378156 PYCR2Q96C36 320 aa14.71□□□□□ -0.05
NPHP4-201ENST00000378156 NUS1Q96E22 293 aa14.71□□□□□ -0.05
NPHP4-201ENST00000378156 C12orf66Q96MD2 445 aa14.71□□□□□ -0.05
NPHP4-201ENST00000378156 MTERF1Q99551 399 aaKnown RBP14.71□□□□□ -0.05
NPHP4-201ENST00000378156 S100A13Q99584 98 aa14.71□□□□□ -0.05
NPHP4-201ENST00000378156 EBPLQ9BY08 206 aa14.71□□□□□ -0.05
NPHP4-201ENST00000378156 MKS1Q9NXB0 559 aa14.71□□□□□ -0.05
NPHP4-201ENST00000378156 OAZ3Q9UMX2 235 aa14.71□□□□□ -0.05
NPHP4-201ENST00000378156 COQ6Q9Y2Z9 468 aa14.71□□□□□ -0.05
NPHP4-201ENST00000378156 PEX16Q9Y5Y5 336 aa14.71□□□□□ -0.05
NPHP4-201ENST00000378156 FAM92AA1XBS5 289 aa14.71□□□□□ -0.05
NPHP4-201ENST00000378156 H3BNH8 94 aa14.71□□□□□ -0.05
NPHP4-201ENST00000378156 MTX2O75431 263 aa14.71□□□□□ -0.05
NPHP4-201ENST00000378156 HLA-DQA2P01906 255 aa14.71□□□□□ -0.05
NPHP4-201ENST00000378156 FAUP35544 74 aaKnown RBP14.71□□□□□ -0.05
NPHP4-201ENST00000378156 ERVK-8P63133 956 aa14.71□□□□□ -0.05
NPHP4-201ENST00000378156 SCN1BQ07699 218 aa14.71□□□□□ -0.05
NPHP4-201ENST00000378156 SLC13A3Q8WWT9 602 aa14.71□□□□□ -0.05
NPHP4-201ENST00000378156 OVCA2Q8WZ82 227 aa14.71□□□□□ -0.05
NPHP4-201ENST00000378156 PAAF1Q9BRP4 392 aa14.71□□□□□ -0.05
NPHP4-201ENST00000378156 ZSCAN5AQ9BUG6 496 aa14.71□□□□□ -0.05
NPHP4-201ENST00000378156 ABCG4Q9H172 646 aa14.71□□□□□ -0.05
NPHP4-201ENST00000378156 SP140LQ9H930 580 aa14.71□□□□□ -0.05
NPHP4-201ENST00000378156 PDP1Q9P0J1 537 aaPredicted RBP14.71□□□□□ -0.05
NPHP4-201ENST00000378156 KERAO60938 352 aa14.71□□□□□ -0.06
NPHP4-201ENST00000378156 T-ENOLP0DO92 83 aa14.71□□□□□ -0.06
NPHP4-201ENST00000378156 TYRP14679 529 aa14.71□□□□□ -0.06
NPHP4-201ENST00000378156 EFNA1P20827 205 aaPredicted RBP14.71□□□□□ -0.06
NPHP4-201ENST00000378156 SRSF11Q05519 484 aaKnown RBP14.71□□□□□ -0.06
NPHP4-201ENST00000378156 CILP2Q8IUL8 1156 aa14.71□□□□□ -0.06
NPHP4-201ENST00000378156 OR10T2Q8NGX3 314 aa14.71□□□□□ -0.06
NPHP4-201ENST00000378156 BRINP2Q9C0B6 783 aa14.71□□□□□ -0.06
NPHP4-201ENST00000378156 ELAC1Q9H777 363 aaKnown RBP14.71□□□□□ -0.06
NPHP4-201ENST00000378156 NEK6Q9HC98 313 aa14.71□□□□□ -0.06
NPHP4-201ENST00000378156 TRPS1Q9UHF7 1281 aa14.71□□□□□ -0.06
NPHP4-201ENST00000378156 OGDHLQ9ULD0 1010 aa14.71□□□□□ -0.06
NPHP4-201ENST00000378156 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.71□□□□□ -0.06
NPHP4-201ENST00000378156 MAP4K5Q9Y4K4 846 aa14.71□□□□□ -0.06
NPHP4-201ENST00000378156 BCKDKO14874 412 aa14.7□□□□□ -0.06
NPHP4-201ENST00000378156 CDH15P55291 814 aa14.7□□□□□ -0.06
NPHP4-201ENST00000378156 RING1Q06587 406 aa14.7□□□□□ -0.06
NPHP4-201ENST00000378156 TEAD2Q15562 447 aa14.7□□□□□ -0.06
NPHP4-201ENST00000378156 NDUFA9Q16795 377 aa14.7□□□□□ -0.06
NPHP4-201ENST00000378156 PTCHD4Q6ZW05 846 aa14.7□□□□□ -0.06
NPHP4-201ENST00000378156 CLDN19Q8N6F1 224 aa14.7□□□□□ -0.06
NPHP4-201ENST00000378156 POF1BQ8WVV4 589 aa14.7□□□□□ -0.06
NPHP4-201ENST00000378156 KBTBD7Q8WVZ9 684 aa14.7□□□□□ -0.06
NPHP4-201ENST00000378156 CITED4Q96RK1 184 aa14.7□□□□□ -0.06
NPHP4-201ENST00000378156 KCNA7Q96RP8 456 aa14.7□□□□□ -0.06
NPHP4-201ENST00000378156 AQP12BA6NM10 295 aa14.7□□□□□ -0.06
NPHP4-201ENST00000378156 TAS2R41P59536 307 aa14.7□□□□□ -0.06
NPHP4-201ENST00000378156 HMGCS1Q01581 520 aa14.7□□□□□ -0.06
NPHP4-201ENST00000378156 GCNT6Q5T4J0 391 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms