RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 FKBP10Q96AY3 582 aa10.66□□□□□ -0.7
BEST1-201ENST00000378043 SDCCAG3Q96C92 435 aa10.66□□□□□ -0.7
BEST1-201ENST00000378043 EGLN2Q96KS0 407 aa10.66□□□□□ -0.7
BEST1-201ENST00000378043 RBM4BQ9BQ04 359 aaKnown RBP10.66□□□□□ -0.7
BEST1-201ENST00000378043 RBM4Q9BWF3 364 aaKnown RBP10.66□□□□□ -0.7
BEST1-201ENST00000378043 SLC29A3Q9BZD2 475 aa10.66□□□□□ -0.7
BEST1-201ENST00000378043 KCNH6Q9H252 994 aa10.66□□□□□ -0.7
BEST1-201ENST00000378043 SLC32A1Q9H598 525 aa10.66□□□□□ -0.7
BEST1-201ENST00000378043 IL21Q9HBE4 155 aa10.66□□□□□ -0.7
BEST1-201ENST00000378043 VNN3Q9NY84 501 aa10.66□□□□□ -0.7
BEST1-201ENST00000378043 INTS6Q9UL03 887 aaKnown RBP10.66□□□□□ -0.7
BEST1-201ENST00000378043 U3KQV3 271 aa10.66□□□□□ -0.7
BEST1-201ENST00000378043 COL4A6Q14031 1691 aa10.66□□□□□ -0.7
BEST1-201ENST00000378043 FAM220BPB1ANY3 271 aa10.66□□□□□ -0.7
BEST1-201ENST00000378043 GNGT2O14610 69 aa10.66□□□□□ -0.7
BEST1-201ENST00000378043 ERN1O75460 977 aaKnown RBP10.66□□□□□ -0.7
BEST1-201ENST00000378043 MYCLP1P12525 358 aaPredicted RBP10.66□□□□□ -0.7
BEST1-201ENST00000378043 CD70P32970 193 aa10.66□□□□□ -0.7
BEST1-201ENST00000378043 NSG1P42857 185 aa10.66□□□□□ -0.7
BEST1-201ENST00000378043 CSNK1DP48730 415 aa10.66□□□□□ -0.7
BEST1-201ENST00000378043 BMXP51813 675 aa10.66□□□□□ -0.7
BEST1-201ENST00000378043 LMAN2Q12907 356 aa10.66□□□□□ -0.7
BEST1-201ENST00000378043 TUBA3CQ13748 450 aa10.66□□□□□ -0.7
BEST1-201ENST00000378043 ATP13A5Q4VNC0 1218 aa10.66□□□□□ -0.7
BEST1-201ENST00000378043 TPGS2Q68CL5 300 aa10.66□□□□□ -0.7
BEST1-201ENST00000378043 GRAMD4Q6IC98 578 aa10.66□□□□□ -0.7
BEST1-201ENST00000378043 ZCCHC7Q8N3Z6 543 aaKnown RBP10.66□□□□□ -0.7
BEST1-201ENST00000378043 NAT16Q8N8M0 369 aa10.66□□□□□ -0.7
BEST1-201ENST00000378043 NCLNQ969V3 563 aa10.66□□□□□ -0.7
BEST1-201ENST00000378043 TSSK3Q96PN8 268 aa10.66□□□□□ -0.7
BEST1-201ENST00000378043 HHIPQ96QV1 700 aa10.66□□□□□ -0.7
BEST1-201ENST00000378043 LYSMD1Q96S90 227 aa10.66□□□□□ -0.7
BEST1-201ENST00000378043 PARVBQ9HBI1 364 aa10.66□□□□□ -0.7
BEST1-201ENST00000378043 ARL15Q9NXU5 204 aa10.66□□□□□ -0.7
BEST1-201ENST00000378043 PRRC2BQ5JSZ5 2229 aaKnown RBP10.66□□□□□ -0.7
BEST1-201ENST00000378043 A0A096LPI6 279 aa10.65□□□□□ -0.7
BEST1-201ENST00000378043 LOC100130705A0A1B0GUX0 176 aa10.65□□□□□ -0.7
BEST1-201ENST00000378043 ALDH1A1P00352 501 aa10.65□□□□□ -0.7
BEST1-201ENST00000378043 KRT6AP02538 564 aa10.65□□□□□ -0.7
BEST1-201ENST00000378043 KRT6BP04259 564 aa10.65□□□□□ -0.7
BEST1-201ENST00000378043 ANXA5P08758 320 aa10.65□□□□□ -0.7
BEST1-201ENST00000378043 SDC1P18827 310 aa10.65□□□□□ -0.7
BEST1-201ENST00000378043 LHCGRP22888 699 aa10.65□□□□□ -0.7
BEST1-201ENST00000378043 PPP3CCP48454 512 aa10.65□□□□□ -0.7
BEST1-201ENST00000378043 KRT6CP48668 564 aa10.65□□□□□ -0.7
BEST1-201ENST00000378043 PTSQ03393 145 aa10.65□□□□□ -0.7
BEST1-201ENST00000378043 LRRC66Q68CR7 880 aa10.65□□□□□ -0.7
BEST1-201ENST00000378043 CES5AQ6NT32 575 aa10.65□□□□□ -0.7
BEST1-201ENST00000378043 NEK5Q6P3R8 708 aa10.65□□□□□ -0.7
BEST1-201ENST00000378043 DET1Q7L5Y6 550 aa10.65□□□□□ -0.7
BEST1-201ENST00000378043 DCP2Q8IU60 420 aaKnown RBP10.65□□□□□ -0.7
BEST1-201ENST00000378043 VRK3Q8IV63 474 aa10.65□□□□□ -0.7
BEST1-201ENST00000378043 PAF1Q8N7H5 531 aa10.65□□□□□ -0.7
BEST1-201ENST00000378043 OR5K1Q8NHB7 308 aa10.65□□□□□ -0.7
BEST1-201ENST00000378043 CD99L2Q8TCZ2 262 aa10.65□□□□□ -0.7
BEST1-201ENST00000378043 PYCR2Q96C36 320 aa10.65□□□□□ -0.7
BEST1-201ENST00000378043 BARD1Q99728 777 aaKnown RBP10.65□□□□□ -0.7
BEST1-201ENST00000378043 MAGIXQ9H6Y5 334 aa10.65□□□□□ -0.7
BEST1-201ENST00000378043 ATP13A3Q9H7F0 1226 aa10.65□□□□□ -0.7
BEST1-201ENST00000378043 GPN2Q9H9Y4 310 aaPredicted RBP10.65□□□□□ -0.7
BEST1-201ENST00000378043 EXD2Q9NVH0 621 aa10.65□□□□□ -0.7
BEST1-201ENST00000378043 DNAAF2Q9NVR5 837 aaKnown RBP10.65□□□□□ -0.7
BEST1-201ENST00000378043 KCTD5Q9NXV2 234 aa10.65□□□□□ -0.7
BEST1-201ENST00000378043 GPRC5BQ9NZH0 403 aa10.65□□□□□ -0.7
BEST1-201ENST00000378043 TMPRSS11EQ9UL52 423 aa10.65□□□□□ -0.7
BEST1-201ENST00000378043 ERVK-11Q9UQG0 969 aa10.65□□□□□ -0.7
BEST1-201ENST00000378043 PITPNM1O00562 1244 aa10.65□□□□□ -0.7
BEST1-201ENST00000378043 AXIN1O15169 862 aa10.65□□□□□ -0.7
BEST1-201ENST00000378043 HS6ST1O60243 411 aa10.65□□□□□ -0.7
BEST1-201ENST00000378043 INHAP05111 366 aa10.65□□□□□ -0.7
BEST1-201ENST00000378043 IL1RNP18510 177 aa10.65□□□□□ -0.7
BEST1-201ENST00000378043 MAP4P27816 1152 aaKnown RBP10.65□□□□□ -0.7
BEST1-201ENST00000378043 CTSOP43234 321 aaPredicted RBP10.65□□□□□ -0.7
BEST1-201ENST00000378043 STK19P49842 368 aaPredicted RBP10.65□□□□□ -0.7
BEST1-201ENST00000378043 EPS8Q12929 822 aa10.65□□□□□ -0.7
BEST1-201ENST00000378043 VEPH1Q14D04 833 aa10.65□□□□□ -0.7
BEST1-201ENST00000378043 TTLL9Q3SXZ7 439 aa10.65□□□□□ -0.7
BEST1-201ENST00000378043 ADHFE1Q8IWW8 467 aa10.65□□□□□ -0.7
BEST1-201ENST00000378043 ZNF555Q8NEP9 628 aa10.65□□□□□ -0.7
BEST1-201ENST00000378043 SELENOMQ8WWX9 145 aa10.65□□□□□ -0.7
BEST1-201ENST00000378043 FAM120BQ96EK7 910 aaKnown RBP10.65□□□□□ -0.7
BEST1-201ENST00000378043 APIPQ96GX9 242 aa10.65□□□□□ -0.7
BEST1-201ENST00000378043 ITCHQ96J02 903 aa10.65□□□□□ -0.7
BEST1-201ENST00000378043 FAIMQ9NVQ4 179 aa10.65□□□□□ -0.7
BEST1-201ENST00000378043 TDRKHQ9Y2W6 561 aaKnown RBP10.65□□□□□ -0.7
BEST1-201ENST00000378043 UNC80Q8N2C7 3258 aa10.65□□□□□ -0.7
BEST1-201ENST00000378043 NRG2O14511 850 aaPredicted RBP10.64□□□□□ -0.71
BEST1-201ENST00000378043 PRRG1O14668 218 aa10.64□□□□□ -0.71
BEST1-201ENST00000378043 ARHGEF15O94989 841 aa10.64□□□□□ -0.71
BEST1-201ENST00000378043 SOD2P04179 222 aa10.64□□□□□ -0.71
BEST1-201ENST00000378043 CBSLP0DN79 551 aa10.64□□□□□ -0.71
BEST1-201ENST00000378043 S100A3P33764 101 aa10.64□□□□□ -0.71
BEST1-201ENST00000378043 CBSP35520 551 aa10.64□□□□□ -0.71
BEST1-201ENST00000378043 MAGEA2P43356 314 aa10.64□□□□□ -0.71
BEST1-201ENST00000378043 VAC14Q08AM6 782 aa10.64□□□□□ -0.71
BEST1-201ENST00000378043 AQP6Q13520 282 aa10.64□□□□□ -0.71
BEST1-201ENST00000378043 SPIDRQ14159 915 aa10.64□□□□□ -0.71
BEST1-201ENST00000378043 ZNF691Q5VV52 312 aa10.64□□□□□ -0.71
BEST1-201ENST00000378043 CPZQ66K79 652 aa10.64□□□□□ -0.71
BEST1-201ENST00000378043 SLC16A12Q6ZSM3 486 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms