RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 ARRDC3Q96B67 414 aa8.26□□□□□ -1.09
CRNKL1-202ENST00000377340 NECAB3Q96P71 396 aaPredicted RBP8.26□□□□□ -1.09
CRNKL1-202ENST00000377340 TFB2MQ9H5Q4 396 aaKnown RBP8.26□□□□□ -1.09
CRNKL1-202ENST00000377340 CLCA3PQ9Y6N3 262 aa8.26□□□□□ -1.09
CRNKL1-202ENST00000377340 WASF2Q9Y6W5 498 aa8.26□□□□□ -1.09
CRNKL1-202ENST00000377340 ZNFX1Q9P2E3 1918 aaKnown RBP8.26□□□□□ -1.09
CRNKL1-202ENST00000377340 MBTPS2O43462 519 aa8.26□□□□□ -1.09
CRNKL1-202ENST00000377340 B3GALT2O43825 422 aa8.26□□□□□ -1.09
CRNKL1-202ENST00000377340 VEGFDO43915 354 aa8.26□□□□□ -1.09
CRNKL1-202ENST00000377340 SLC22A3O75751 556 aa8.26□□□□□ -1.09
CRNKL1-202ENST00000377340 KCNH1O95259 989 aa8.26□□□□□ -1.09
CRNKL1-202ENST00000377340 NOS3P29474 1203 aa8.26□□□□□ -1.09
CRNKL1-202ENST00000377340 GSCP56915 257 aaPredicted RBP8.26□□□□□ -1.09
CRNKL1-202ENST00000377340 ZNF789Q5FWF6 425 aa8.26□□□□□ -1.09
CRNKL1-202ENST00000377340 BHLHB9Q6PI77 547 aa8.26□□□□□ -1.09
CRNKL1-202ENST00000377340 TRAF7Q6Q0C0 670 aa8.26□□□□□ -1.09
CRNKL1-202ENST00000377340 EID2Q8N6I1 236 aa8.26□□□□□ -1.09
CRNKL1-202ENST00000377340 MDGA1Q8NFP4 955 aa8.26□□□□□ -1.09
CRNKL1-202ENST00000377340 ATXN2LQ8WWM7 1075 aaKnown RBP8.26□□□□□ -1.09
CRNKL1-202ENST00000377340 BTBD9Q96Q07 612 aa8.26□□□□□ -1.09
CRNKL1-202ENST00000377340 DPH7Q9BTV6 452 aa8.26□□□□□ -1.09
CRNKL1-202ENST00000377340 SLC32A1Q9H598 525 aa8.26□□□□□ -1.09
CRNKL1-202ENST00000377340 C3orf14Q9HBI5 128 aa8.26□□□□□ -1.09
CRNKL1-202ENST00000377340 SNX7Q9UNH6 387 aa8.26□□□□□ -1.09
CRNKL1-202ENST00000377340 GTF2A1LQ9UNN4 478 aa8.26□□□□□ -1.09
CRNKL1-202ENST00000377340 HS3ST2Q9Y278 367 aa8.26□□□□□ -1.09
CRNKL1-202ENST00000377340 NFS1Q9Y697 457 aa8.26□□□□□ -1.09
CRNKL1-202ENST00000377340 MTCH2Q9Y6C9 303 aa8.26□□□□□ -1.09
CRNKL1-202ENST00000377340 HNRNPCL1O60812 293 aaKnown RBP8.26□□□□□ -1.09
CRNKL1-202ENST00000377340 CALB2P22676 271 aa8.26□□□□□ -1.09
CRNKL1-202ENST00000377340 TPMTP51580 245 aa8.26□□□□□ -1.09
CRNKL1-202ENST00000377340 SRP54P61011 504 aaKnown RBP8.26□□□□□ -1.09
CRNKL1-202ENST00000377340 GNA13Q14344 377 aa8.26□□□□□ -1.09
CRNKL1-202ENST00000377340 SCUBE1Q8IWY4 988 aa8.26□□□□□ -1.09
CRNKL1-202ENST00000377340 PLD6Q8N2A8 252 aaKnown RBP8.26□□□□□ -1.09
CRNKL1-202ENST00000377340 ZDHHC1Q8WTX9 485 aa8.26□□□□□ -1.09
CRNKL1-202ENST00000377340 MMABQ96EY8 250 aaPredicted RBP8.26□□□□□ -1.09
CRNKL1-202ENST00000377340 OLFM3Q96PB7 478 aa8.26□□□□□ -1.09
CRNKL1-202ENST00000377340 ARHGAP9Q9BRR9 750 aa8.26□□□□□ -1.09
CRNKL1-202ENST00000377340 MKRN2Q9H000 416 aaKnown RBP8.26□□□□□ -1.09
CRNKL1-202ENST00000377340 DHRS7Q9Y394 339 aa8.26□□□□□ -1.09
CRNKL1-202ENST00000377340 A8MT66 165 aa8.25□□□□□ -1.09
CRNKL1-202ENST00000377340 TMEM233B4DJY2 109 aa8.25□□□□□ -1.09
CRNKL1-202ENST00000377340 S1PR4O95977 384 aa8.25□□□□□ -1.09
CRNKL1-202ENST00000377340 CTSCP53634 463 aa8.25□□□□□ -1.09
CRNKL1-202ENST00000377340 NFKB2Q00653 900 aa8.25□□□□□ -1.09
CRNKL1-202ENST00000377340 SRSF11Q05519 484 aaKnown RBP8.25□□□□□ -1.09
CRNKL1-202ENST00000377340 IRF4Q15306 451 aa8.25□□□□□ -1.09
CRNKL1-202ENST00000377340 C12orf40Q86WS4 652 aa8.25□□□□□ -1.09
CRNKL1-202ENST00000377340 DOK4Q8TEW6 326 aa8.25□□□□□ -1.09
CRNKL1-202ENST00000377340 MYEOVQ96EZ4 313 aa8.25□□□□□ -1.09
CRNKL1-202ENST00000377340 ZDHHC12Q96GR4 267 aa8.25□□□□□ -1.09
CRNKL1-202ENST00000377340 GPR22Q99680 433 aa8.25□□□□□ -1.09
CRNKL1-202ENST00000377340 GDF15Q99988 308 aa8.25□□□□□ -1.09
CRNKL1-202ENST00000377340 EFCAB11Q9BUY7 163 aa8.25□□□□□ -1.09
CRNKL1-202ENST00000377340 PRDM6Q9NQX0 595 aa8.25□□□□□ -1.09
CRNKL1-202ENST00000377340 IMPAD1Q9NX62 359 aa8.25□□□□□ -1.09
CRNKL1-202ENST00000377340 THAP10Q9P2Z0 257 aaPredicted RBP8.25□□□□□ -1.09
CRNKL1-202ENST00000377340 INTS6Q9UL03 887 aaKnown RBP8.25□□□□□ -1.09
CRNKL1-202ENST00000377340 SUFUQ9UMX1 484 aa8.25□□□□□ -1.09
CRNKL1-202ENST00000377340 MAP4K5Q9Y4K4 846 aa8.25□□□□□ -1.09
CRNKL1-202ENST00000377340 MYO10Q9HD67 2058 aa8.25□□□□□ -1.09
CRNKL1-202ENST00000377340 ICE1Q9Y2F5 2266 aa8.25□□□□□ -1.09
CRNKL1-202ENST00000377340 MYO1CO00159 1063 aa8.25□□□□□ -1.09
CRNKL1-202ENST00000377340 DUX1O43812 170 aa8.25□□□□□ -1.09
CRNKL1-202ENST00000377340 SLC28A2O43868 658 aa8.25□□□□□ -1.09
CRNKL1-202ENST00000377340 DLX3O60479 287 aa8.25□□□□□ -1.09
CRNKL1-202ENST00000377340 TBX10O75333 385 aa8.25□□□□□ -1.09
CRNKL1-202ENST00000377340 KLK1P06870 262 aa8.25□□□□□ -1.09
CRNKL1-202ENST00000377340 CCNA2P20248 432 aa8.25□□□□□ -1.09
CRNKL1-202ENST00000377340 RRM2P31350 389 aa8.25□□□□□ -1.09
CRNKL1-202ENST00000377340 LAPTM5Q13571 262 aa8.25□□□□□ -1.09
CRNKL1-202ENST00000377340 LSM12Q3MHD2 195 aaKnown RBP8.25□□□□□ -1.09
CRNKL1-202ENST00000377340 C1orf189Q5VU69 101 aa8.25□□□□□ -1.09
CRNKL1-202ENST00000377340 VN1R5Q7Z5H4 357 aa8.25□□□□□ -1.09
CRNKL1-202ENST00000377340 SDR16C5Q8N3Y7 309 aa8.25□□□□□ -1.09
CRNKL1-202ENST00000377340 LMNTD1Q8N9Z9 388 aa8.25□□□□□ -1.09
CRNKL1-202ENST00000377340 OR4A15Q8NGL6 344 aa8.25□□□□□ -1.09
CRNKL1-202ENST00000377340 ARRDC2Q8TBH0 407 aa8.25□□□□□ -1.09
CRNKL1-202ENST00000377340 ISG20Q96AZ6 181 aaKnown RBP8.25□□□□□ -1.09
CRNKL1-202ENST00000377340 STRADBQ9C0K7 418 aa8.25□□□□□ -1.09
CRNKL1-202ENST00000377340 DOCK5Q9H7D0 1870 aa8.25□□□□□ -1.09
CRNKL1-202ENST00000377340 FAM221BA6H8Z2 402 aa8.25□□□□□ -1.09
CRNKL1-202ENST00000377340 CFAP73A6NFT4 308 aa8.25□□□□□ -1.09
CRNKL1-202ENST00000377340 PRR5-ARHGAP8B1AHC4 643 aa8.25□□□□□ -1.09
CRNKL1-202ENST00000377340 H0Y8X5 98 aa8.25□□□□□ -1.09
CRNKL1-202ENST00000377340 C8orf89P0DMQ9 161 aa8.25□□□□□ -1.09
CRNKL1-202ENST00000377340 ZNF37AP17032 561 aaPredicted RBP8.25□□□□□ -1.09
CRNKL1-202ENST00000377340 CTBSQ01459 385 aa8.25□□□□□ -1.09
CRNKL1-202ENST00000377340 HEPACAMQ14CZ8 416 aa8.25□□□□□ -1.09
CRNKL1-202ENST00000377340 RNF44Q7L0R7 432 aa8.25□□□□□ -1.09
CRNKL1-202ENST00000377340 TRIM73Q86UV7 250 aa8.25□□□□□ -1.09
CRNKL1-202ENST00000377340 AMIGO1Q86WK6 493 aa8.25□□□□□ -1.09
CRNKL1-202ENST00000377340 FAM20CQ8IXL6 584 aa8.25□□□□□ -1.09
CRNKL1-202ENST00000377340 C1orf52Q8N6N3 182 aaKnown RBP8.25□□□□□ -1.09
CRNKL1-202ENST00000377340 AVL9Q8NBF6 648 aa8.25□□□□□ -1.09
CRNKL1-202ENST00000377340 CAMKVQ8NCB2 501 aa8.25□□□□□ -1.09
CRNKL1-202ENST00000377340 C2CD4AQ8NCU7 369 aaPredicted RBP8.25□□□□□ -1.09
CRNKL1-202ENST00000377340 RCN3Q96D15 328 aa8.25□□□□□ -1.09
CRNKL1-202ENST00000377340 C17orf62Q9BQA9 187 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms