RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 CLCA2Q9UQC9 943 aa11.4□□□□□ -0.59
DDR1-227ENST00000376570 KCNK6Q9Y257 313 aa11.4□□□□□ -0.59
DDR1-227ENST00000376570 DYRK1BQ9Y463 629 aa11.4□□□□□ -0.59
DDR1-227ENST00000376570 GMFGO60234 142 aa11.39□□□□□ -0.59
DDR1-227ENST00000376570 VNN2O95498 520 aa11.39□□□□□ -0.59
DDR1-227ENST00000376570 IGLV3-25P01717 112 aa11.39□□□□□ -0.59
DDR1-227ENST00000376570 ZNF140P52738 457 aaPredicted RBP11.39□□□□□ -0.59
DDR1-227ENST00000376570 CTSCP53634 463 aa11.39□□□□□ -0.59
DDR1-227ENST00000376570 RPS14P62263 151 aaKnown RBP11.39□□□□□ -0.59
DDR1-227ENST00000376570 ALDH6A1Q02252 535 aaKnown RBP11.39□□□□□ -0.59
DDR1-227ENST00000376570 MYBPC3Q14896 1274 aa11.39□□□□□ -0.59
DDR1-227ENST00000376570 MEP1AQ16819 746 aa11.39□□□□□ -0.59
DDR1-227ENST00000376570 NCEH1Q6PIU2 408 aa11.39□□□□□ -0.59
DDR1-227ENST00000376570 OR10G6Q8NH81 332 aa11.39□□□□□ -0.59
DDR1-227ENST00000376570 NACC2Q96BF6 587 aa11.39□□□□□ -0.59
DDR1-227ENST00000376570 UBXN10Q96LJ8 280 aa11.39□□□□□ -0.59
DDR1-227ENST00000376570 DACH2Q96NX9 599 aa11.39□□□□□ -0.59
DDR1-227ENST00000376570 INTS10Q9NVR2 710 aaKnown RBP11.39□□□□□ -0.59
DDR1-227ENST00000376570 DLGAP4Q9Y2H0 992 aa11.39□□□□□ -0.59
DDR1-227ENST00000376570 RLFQ13129 1914 aa11.39□□□□□ -0.59
DDR1-227ENST00000376570 GRM6O15303 877 aa11.39□□□□□ -0.59
DDR1-227ENST00000376570 TIE1P35590 1138 aa11.39□□□□□ -0.59
DDR1-227ENST00000376570 RPS9P46781 194 aaKnown RBP11.39□□□□□ -0.59
DDR1-227ENST00000376570 POLR2LP62875 67 aaKnown RBP11.39□□□□□ -0.59
DDR1-227ENST00000376570 CBX3Q13185 183 aa11.39□□□□□ -0.59
DDR1-227ENST00000376570 TBC1D25Q3MII6 688 aa11.39□□□□□ -0.59
DDR1-227ENST00000376570 CARD16Q5EG05 197 aa11.39□□□□□ -0.59
DDR1-227ENST00000376570 GDPD4Q6W3E5 623 aa11.39□□□□□ -0.59
DDR1-227ENST00000376570 CCDC149Q6ZUS6 474 aa11.39□□□□□ -0.59
DDR1-227ENST00000376570 LARP4Q71RC2 724 aaKnown RBP eCLIP11.39□□□□□ -0.59
DDR1-227ENST00000376570 OLIG3Q7RTU3 272 aa11.39□□□□□ -0.59
DDR1-227ENST00000376570 DLG3Q92796 817 aa11.39□□□□□ -0.59
DDR1-227ENST00000376570 GTPBP3Q969Y2 492 aaKnown RBP11.39□□□□□ -0.59
DDR1-227ENST00000376570 CLIP3Q96DZ5 547 aa11.39□□□□□ -0.59
DDR1-227ENST00000376570 APIPQ96GX9 242 aa11.39□□□□□ -0.59
DDR1-227ENST00000376570 PHOX2BQ99453 314 aa11.39□□□□□ -0.59
DDR1-227ENST00000376570 PKMYT1Q99640 499 aa11.39□□□□□ -0.59
DDR1-227ENST00000376570 C9orf16Q9BUW7 83 aa11.39□□□□□ -0.59
DDR1-227ENST00000376570 VN1R3Q9BXE9 311 aa11.39□□□□□ -0.59
DDR1-227ENST00000376570 KCTD5Q9NXV2 234 aa11.39□□□□□ -0.59
DDR1-227ENST00000376570 GPRC5BQ9NZH0 403 aa11.39□□□□□ -0.59
DDR1-227ENST00000376570 MAP10Q9P2G4 905 aa11.39□□□□□ -0.59
DDR1-227ENST00000376570 EBF1Q9UH73 591 aa11.39□□□□□ -0.59
DDR1-227ENST00000376570 DAPK2Q9UIK4 370 aa11.39□□□□□ -0.59
DDR1-227ENST00000376570 EPN2O95208 641 aa11.39□□□□□ -0.59
DDR1-227ENST00000376570 POP4O95707 220 aaKnown RBP11.39□□□□□ -0.59
DDR1-227ENST00000376570 PGRP06401 933 aa11.39□□□□□ -0.59
DDR1-227ENST00000376570 ACP5P13686 325 aa11.39□□□□□ -0.59
DDR1-227ENST00000376570 KIR3DL1P43629 444 aa11.39□□□□□ -0.59
DDR1-227ENST00000376570 HSPA13P48723 471 aa11.39□□□□□ -0.59
DDR1-227ENST00000376570 PCYT1AP49585 367 aa11.39□□□□□ -0.59
DDR1-227ENST00000376570 SLC16A1P53985 500 aa11.39□□□□□ -0.59
DDR1-227ENST00000376570 MYBPC1Q00872 1141 aa11.39□□□□□ -0.59
DDR1-227ENST00000376570 HSD11B1LQ7Z5J1 315 aa11.39□□□□□ -0.59
DDR1-227ENST00000376570 TMEM132CQ8N3T6 1108 aa11.39□□□□□ -0.59
DDR1-227ENST00000376570 KAT2AQ92830 837 aa11.39□□□□□ -0.59
DDR1-227ENST00000376570 ZSWIM3Q96MP5 696 aa11.39□□□□□ -0.59
DDR1-227ENST00000376570 HEPHQ9BQS7 1158 aa11.39□□□□□ -0.59
DDR1-227ENST00000376570 MEAF6Q9HAF1 191 aa11.39□□□□□ -0.59
DDR1-227ENST00000376570 CXorf21Q9HAI6 301 aa11.39□□□□□ -0.59
DDR1-227ENST00000376570 STOX2Q9P2F5 926 aaPredicted RBP11.39□□□□□ -0.59
DDR1-227ENST00000376570 DEC1Q9P2X7 70 aa11.39□□□□□ -0.59
DDR1-227ENST00000376570 MROH6A6NGR9 719 aa11.38□□□□□ -0.59
DDR1-227ENST00000376570 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.38□□□□□ -0.59
DDR1-227ENST00000376570 G3V2T6 193 aa11.38□□□□□ -0.59
DDR1-227ENST00000376570 H3BN98 237 aa11.38□□□□□ -0.59
DDR1-227ENST00000376570 H3BNX3 289 aa11.38□□□□□ -0.59
DDR1-227ENST00000376570 FADS2O95864 444 aaKnown RBP11.38□□□□□ -0.59
DDR1-227ENST00000376570 C8orf89P0DMQ9 161 aa11.38□□□□□ -0.59
DDR1-227ENST00000376570 GPX3P22352 226 aa11.38□□□□□ -0.59
DDR1-227ENST00000376570 CCR7P32248 378 aa11.38□□□□□ -0.59
DDR1-227ENST00000376570 CCR2P41597 374 aa11.38□□□□□ -0.59
DDR1-227ENST00000376570 NSG1P42857 185 aa11.38□□□□□ -0.59
DDR1-227ENST00000376570 SOX9P48436 509 aa11.38□□□□□ -0.59
DDR1-227ENST00000376570 NRIP1P48552 1158 aa11.38□□□□□ -0.59
DDR1-227ENST00000376570 CLK1P49759 484 aaKnown RBP11.38□□□□□ -0.59
DDR1-227ENST00000376570 AP1S1P61966 158 aa11.38□□□□□ -0.59
DDR1-227ENST00000376570 NR1D2Q14995 579 aa11.38□□□□□ -0.59
DDR1-227ENST00000376570 FAM129CQ86XR2 697 aa11.38□□□□□ -0.59
DDR1-227ENST00000376570 CLIP4Q8N3C7 705 aa11.38□□□□□ -0.59
DDR1-227ENST00000376570 TMEM151AQ8N4L1 468 aa11.38□□□□□ -0.59
DDR1-227ENST00000376570 DEFB119Q8N690 84 aa11.38□□□□□ -0.59
DDR1-227ENST00000376570 ADCY4Q8NFM4 1077 aa11.38□□□□□ -0.59
DDR1-227ENST00000376570 EID2BQ96D98 161 aa11.38□□□□□ -0.59
DDR1-227ENST00000376570 MUS81Q96NY9 551 aa11.38□□□□□ -0.59
DDR1-227ENST00000376570 RPF2Q9H7B2 306 aaKnown RBP11.38□□□□□ -0.59
DDR1-227ENST00000376570 FANCEQ9HB96 536 aa11.38□□□□□ -0.59
DDR1-227ENST00000376570 DNAJC11Q9NVH1 559 aa11.38□□□□□ -0.59
DDR1-227ENST00000376570 SMOXQ9NWM0 555 aa11.38□□□□□ -0.59
DDR1-227ENST00000376570 SNX6Q9UNH7 406 aa11.38□□□□□ -0.59
DDR1-227ENST00000376570 ZDBF2Q9HCK1 2354 aa11.38□□□□□ -0.59
DDR1-227ENST00000376570 TBC1D3DA0A087WVF3 549 aa11.38□□□□□ -0.59
DDR1-227ENST00000376570 TBC1D3IA0A087WXS9 549 aa11.38□□□□□ -0.59
DDR1-227ENST00000376570 TBC1D3EA0A087X179 549 aa11.38□□□□□ -0.59
DDR1-227ENST00000376570 TBC1D3KA0A087X1G2 549 aa11.38□□□□□ -0.59
DDR1-227ENST00000376570 A0A1W2PP18 115 aa11.38□□□□□ -0.59
DDR1-227ENST00000376570 ELOVL7A1L3X0 281 aa11.38□□□□□ -0.59
DDR1-227ENST00000376570 TBC1D3FA6NER0 549 aaPredicted RBP11.38□□□□□ -0.59
DDR1-227ENST00000376570 TBC1D3LB9A6J9 549 aa11.38□□□□□ -0.59
DDR1-227ENST00000376570 HTRA2O43464 458 aaPredicted RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms