RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 AQP12AQ8IXF9 295 aa13.65□□□□□ -0.22
MSH5-202ENST00000375740 ADI1Q9BV57 179 aa13.65□□□□□ -0.22
MSH5-202ENST00000375740 TRIM15Q9C019 465 aa13.65□□□□□ -0.22
MSH5-202ENST00000375740 TPK1Q9H3S4 243 aa13.65□□□□□ -0.22
MSH5-202ENST00000375740 NANOGQ9H9S0 305 aa13.65□□□□□ -0.22
MSH5-202ENST00000375740 INTS7Q9NVH2 962 aaKnown RBP13.65□□□□□ -0.22
MSH5-202ENST00000375740 TMEM45AQ9NWC5 275 aa13.65□□□□□ -0.22
MSH5-202ENST00000375740 TUBA8Q9NY65 449 aaPredicted RBP13.65□□□□□ -0.22
MSH5-202ENST00000375740 POU2F3Q9UKI9 436 aa13.65□□□□□ -0.22
MSH5-202ENST00000375740 AURKCQ9UQB9 309 aa13.65□□□□□ -0.22
MSH5-202ENST00000375740 POLR3HQ9Y535 204 aaPredicted RBP13.65□□□□□ -0.22
MSH5-202ENST00000375740 LAMA2P24043 3122 aaKnown RBP13.65□□□□□ -0.22
MSH5-202ENST00000375740 RSL1D1O76021 490 aaKnown RBP13.65□□□□□ -0.22
MSH5-202ENST00000375740 DDX6P26196 483 aaKnown RBP eCLIP13.65□□□□□ -0.22
MSH5-202ENST00000375740 SOX11P35716 441 aa13.65□□□□□ -0.22
MSH5-202ENST00000375740 RPIAP49247 311 aa13.65□□□□□ -0.22
MSH5-202ENST00000375740 ARHGAP15Q53QZ3 475 aa13.65□□□□□ -0.22
MSH5-202ENST00000375740 SGO1Q5FBB7 561 aa13.65□□□□□ -0.22
MSH5-202ENST00000375740 LCN8Q6JVE9 175 aa13.65□□□□□ -0.22
MSH5-202ENST00000375740 UBTD2Q8WUN7 234 aa13.65□□□□□ -0.22
MSH5-202ENST00000375740 SORCS1Q8WY21 1168 aa13.65□□□□□ -0.22
MSH5-202ENST00000375740 HPS1Q92902 700 aa13.65□□□□□ -0.22
MSH5-202ENST00000375740 ALG2Q9H553 416 aa13.65□□□□□ -0.22
MSH5-202ENST00000375740 GIN1Q9NXP7 522 aa13.65□□□□□ -0.22
MSH5-202ENST00000375740 KLQ9UEF7 1012 aa13.65□□□□□ -0.22
MSH5-202ENST00000375740 HCFC2Q9Y5Z7 792 aa13.65□□□□□ -0.22
MSH5-202ENST00000375740 IGLV3-16A0A075B6K0 115 aa13.64□□□□□ -0.23
MSH5-202ENST00000375740 ANKRD28O15084 1053 aa13.64□□□□□ -0.23
MSH5-202ENST00000375740 ARPC2O15144 300 aa13.64□□□□□ -0.23
MSH5-202ENST00000375740 STK16O75716 305 aa13.64□□□□□ -0.23
MSH5-202ENST00000375740 OR56A5P0C7T3 313 aa13.64□□□□□ -0.23
MSH5-202ENST00000375740 MTHFD1P11586 935 aaKnown RBP13.64□□□□□ -0.23
MSH5-202ENST00000375740 EPB42P16452 691 aa13.64□□□□□ -0.23
MSH5-202ENST00000375740 NR4A1P22736 598 aa13.64□□□□□ -0.23
MSH5-202ENST00000375740 AOAHP28039 575 aa13.64□□□□□ -0.23
MSH5-202ENST00000375740 IDUAP35475 653 aa13.64□□□□□ -0.23
MSH5-202ENST00000375740 DGKQP52824 942 aa13.64□□□□□ -0.23
MSH5-202ENST00000375740 POLR2LP62875 67 aaKnown RBP13.64□□□□□ -0.23
MSH5-202ENST00000375740 HSPA14Q0VDF9 509 aa13.64□□□□□ -0.23
MSH5-202ENST00000375740 TRIM16LQ309B1 348 aa13.64□□□□□ -0.23
MSH5-202ENST00000375740 SPATS1Q496A3 300 aa13.64□□□□□ -0.23
MSH5-202ENST00000375740 TBCELQ5QJ74 424 aa13.64□□□□□ -0.23
MSH5-202ENST00000375740 CYB5D2Q8WUJ1 264 aa13.64□□□□□ -0.23
MSH5-202ENST00000375740 POF1BQ8WVV4 589 aa13.64□□□□□ -0.23
MSH5-202ENST00000375740 TRUB1Q8WWH5 349 aaKnown RBP13.64□□□□□ -0.23
MSH5-202ENST00000375740 CYGBQ8WWM9 190 aa13.64□□□□□ -0.23
MSH5-202ENST00000375740 ULK4Q96C45 1275 aa13.64□□□□□ -0.23
MSH5-202ENST00000375740 PPP3R2Q96LZ3 170 aa13.64□□□□□ -0.23
MSH5-202ENST00000375740 ZSWIM3Q96MP5 696 aa13.64□□□□□ -0.23
MSH5-202ENST00000375740 CSF3RQ99062 836 aa13.64□□□□□ -0.23
MSH5-202ENST00000375740 KCTD14Q9BQ13 255 aaPredicted RBP13.64□□□□□ -0.23
MSH5-202ENST00000375740 NTMT1Q9BV86 223 aa13.64□□□□□ -0.23
MSH5-202ENST00000375740 ERVW-1Q9UQF0 538 aa13.64□□□□□ -0.23
MSH5-202ENST00000375740 PDE10AQ9Y233 779 aa13.64□□□□□ -0.23
MSH5-202ENST00000375740 NOX1Q9Y5S8 564 aa13.64□□□□□ -0.23
MSH5-202ENST00000375740 WNT6Q9Y6F9 365 aa13.64□□□□□ -0.23
MSH5-202ENST00000375740 DHRS12A0PJE2 317 aa13.64□□□□□ -0.23
MSH5-202ENST00000375740 TRIM64A6NGJ6 449 aa13.64□□□□□ -0.23
MSH5-202ENST00000375740 RGS14O43566 566 aa13.64□□□□□ -0.23
MSH5-202ENST00000375740 FGF19O95750 216 aa13.64□□□□□ -0.23
MSH5-202ENST00000375740 ANXA5P08758 320 aa13.64□□□□□ -0.23
MSH5-202ENST00000375740 EBLN1P0CF75 366 aa13.64□□□□□ -0.23
MSH5-202ENST00000375740 NCK1P16333 377 aa13.64□□□□□ -0.23
MSH5-202ENST00000375740 MSH3P20585 1137 aa13.64□□□□□ -0.23
MSH5-202ENST00000375740 MYF6P23409 242 aa13.64□□□□□ -0.23
MSH5-202ENST00000375740 RECQLP46063 649 aaPredicted RBP13.64□□□□□ -0.23
MSH5-202ENST00000375740 HMGCS1Q01581 520 aa13.64□□□□□ -0.23
MSH5-202ENST00000375740 MERTKQ12866 999 aa13.64□□□□□ -0.23
MSH5-202ENST00000375740 INPP5AQ14642 412 aa13.64□□□□□ -0.23
MSH5-202ENST00000375740 PLCL1Q15111 1095 aa13.64□□□□□ -0.23
MSH5-202ENST00000375740 SF3B4Q15427 424 aaKnown RBP eCLIP13.64□□□□□ -0.234e-9■■■■□ 20.4
MSH5-202ENST00000375740 PLA2G4EQ3MJ16 856 aa13.64□□□□□ -0.23
MSH5-202ENST00000375740 IRAK1BP1Q5VVH5 260 aa13.64□□□□□ -0.23
MSH5-202ENST00000375740 ZDHHC20Q5W0Z9 365 aa13.64□□□□□ -0.23
MSH5-202ENST00000375740 CHCHD4Q8N4Q1 142 aa13.64□□□□□ -0.23
MSH5-202ENST00000375740 ZNF420Q8TAQ5 688 aaPredicted RBP13.64□□□□□ -0.23
MSH5-202ENST00000375740 PIF1Q9H611 641 aa13.64□□□□□ -0.23
MSH5-202ENST00000375740 ARL15Q9NXU5 204 aa13.64□□□□□ -0.23
MSH5-202ENST00000375740 KLHL42Q9P2K6 505 aa13.64□□□□□ -0.23
MSH5-202ENST00000375740 DAPK2Q9UIK4 370 aa13.64□□□□□ -0.23
MSH5-202ENST00000375740 ZNF490Q9ULM2 529 aaPredicted RBP13.64□□□□□ -0.23
MSH5-202ENST00000375740 USP22Q9UPT9 525 aa13.64□□□□□ -0.23
MSH5-202ENST00000375740 TRIM64BA6NI03 449 aa13.63□□□□□ -0.23
MSH5-202ENST00000375740 TTC34A8MYJ7 566 aa13.63□□□□□ -0.23
MSH5-202ENST00000375740 WASH3PC4AMC7 463 aa13.63□□□□□ -0.23
MSH5-202ENST00000375740 SLC28A1O00337 649 aa13.63□□□□□ -0.23
MSH5-202ENST00000375740 ULK1O75385 1050 aa13.63□□□□□ -0.23
MSH5-202ENST00000375740 MTX2O75431 263 aa13.63□□□□□ -0.23
MSH5-202ENST00000375740 MAP4P27816 1152 aaKnown RBP13.63□□□□□ -0.23
MSH5-202ENST00000375740 CTNNB1P35222 781 aa13.63□□□□□ -0.23
MSH5-202ENST00000375740 BMPR1AP36894 532 aa13.63□□□□□ -0.23
MSH5-202ENST00000375740 EEFSECP57772 596 aaKnown RBP13.63□□□□□ -0.23
MSH5-202ENST00000375740 RPL38P63173 70 aaKnown RBP13.63□□□□□ -0.23
MSH5-202ENST00000375740 UBE2R2Q712K3 238 aaPredicted RBP13.63□□□□□ -0.23
MSH5-202ENST00000375740 ERMP1Q7Z2K6 904 aa13.63□□□□□ -0.23
MSH5-202ENST00000375740 SKA2Q8WVK7 121 aaPredicted RBP13.63□□□□□ -0.23
MSH5-202ENST00000375740 SCAMP4Q969E2 229 aa13.63□□□□□ -0.23
MSH5-202ENST00000375740 MTFMTQ96DP5 389 aaKnown RBP13.63□□□□□ -0.23
MSH5-202ENST00000375740 TRPS1Q9UHF7 1281 aa13.63□□□□□ -0.23
MSH5-202ENST00000375740 NOTCH4Q99466 2003 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms