RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 PHC1P78364 1004 aa13.8□□□□□ -0.2
CLCNKA-202ENST00000375692 SLC13A2Q13183 592 aa13.8□□□□□ -0.2
CLCNKA-202ENST00000375692 GTF2H3Q13889 308 aa13.8□□□□□ -0.2
CLCNKA-202ENST00000375692 CLCA4Q14CN2 919 aa13.8□□□□□ -0.2
CLCNKA-202ENST00000375692 HIST2H2ACQ16777 129 aaPredicted RBP13.8□□□□□ -0.2
CLCNKA-202ENST00000375692 SUSD1Q6UWL2 747 aa13.8□□□□□ -0.2
CLCNKA-202ENST00000375692 SBSNQ6UWP8 590 aa13.8□□□□□ -0.2
CLCNKA-202ENST00000375692 GPR149Q86SP6 731 aa13.8□□□□□ -0.2
CLCNKA-202ENST00000375692 ZNF300Q96RE9 604 aaPredicted RBP13.8□□□□□ -0.2
CLCNKA-202ENST00000375692 MGME1Q9BQP7 344 aa13.8□□□□□ -0.2
CLCNKA-202ENST00000375692 CINPQ9BW66 212 aaPredicted RBP13.8□□□□□ -0.2
CLCNKA-202ENST00000375692 KAT8Q9H7Z6 458 aaKnown RBP13.8□□□□□ -0.2
CLCNKA-202ENST00000375692 NUDT4Q9NZJ9 180 aa13.8□□□□□ -0.2
CLCNKA-202ENST00000375692 SLCO3A1Q9UIG8 710 aa13.8□□□□□ -0.2
CLCNKA-202ENST00000375692 POU2F3Q9UKI9 436 aa13.8□□□□□ -0.2
CLCNKA-202ENST00000375692 EIF3LQ9Y262 564 aaKnown RBP13.8□□□□□ -0.2
CLCNKA-202ENST00000375692 PKP3Q9Y446 797 aa13.8□□□□□ -0.2
CLCNKA-202ENST00000375692 TTC34A8MYJ7 566 aa13.79□□□□□ -0.2
CLCNKA-202ENST00000375692 NT5C1B-RDH14C9J2C7 533 aa13.79□□□□□ -0.2
CLCNKA-202ENST00000375692 INSIG1O15503 277 aa13.79□□□□□ -0.2
CLCNKA-202ENST00000375692 TAPBPO15533 448 aa13.79□□□□□ -0.2
CLCNKA-202ENST00000375692 SEC22BO75396 215 aa13.79□□□□□ -0.2
CLCNKA-202ENST00000375692 OR1G1P47890 313 aa13.79□□□□□ -0.2
CLCNKA-202ENST00000375692 SLC35A2P78381 396 aa13.79□□□□□ -0.2
CLCNKA-202ENST00000375692 ACOX1Q15067 660 aa13.79□□□□□ -0.2
CLCNKA-202ENST00000375692 PCBP2Q15366 365 aaKnown RBP eCLIP13.79□□□□□ -0.2
CLCNKA-202ENST00000375692 GALNT10Q86SR1 603 aa13.79□□□□□ -0.2
CLCNKA-202ENST00000375692 PSMA8Q8TAA3 256 aa13.79□□□□□ -0.2
CLCNKA-202ENST00000375692 FBLIM1Q8WUP2 373 aa13.79□□□□□ -0.2
CLCNKA-202ENST00000375692 FBXO32Q969P5 355 aa13.79□□□□□ -0.2
CLCNKA-202ENST00000375692 PPP3R2Q96LZ3 170 aa13.79□□□□□ -0.2
CLCNKA-202ENST00000375692 CCSER2Q9H7U1 834 aa13.79□□□□□ -0.2
CLCNKA-202ENST00000375692 FBXO8Q9NRD0 319 aa13.79□□□□□ -0.2
CLCNKA-202ENST00000375692 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.79□□□□□ -0.2
CLCNKA-202ENST00000375692 PCDHB7Q9Y5E2 793 aa13.79□□□□□ -0.2
CLCNKA-202ENST00000375692 PCDHGB1Q9Y5G3 927 aa13.79□□□□□ -0.2
CLCNKA-202ENST00000375692 FFAR2O15552 330 aa13.79□□□□□ -0.2
CLCNKA-202ENST00000375692 DNAJB5O75953 348 aa13.79□□□□□ -0.2
CLCNKA-202ENST00000375692 TACR2P21452 398 aa13.79□□□□□ -0.2
CLCNKA-202ENST00000375692 DAPP51397 102 aa13.79□□□□□ -0.2
CLCNKA-202ENST00000375692 TPTEP56180 551 aa13.79□□□□□ -0.2
CLCNKA-202ENST00000375692 ARPP19P56211 112 aa13.79□□□□□ -0.2
CLCNKA-202ENST00000375692 TAF10Q12962 218 aa13.79□□□□□ -0.2
CLCNKA-202ENST00000375692 SELENBP1Q13228 472 aa13.79□□□□□ -0.2
CLCNKA-202ENST00000375692 CCDC92Q53HC0 331 aaPredicted RBP13.79□□□□□ -0.2
CLCNKA-202ENST00000375692 KCNJ9Q92806 393 aa13.79□□□□□ -0.2
CLCNKA-202ENST00000375692 FAM120BQ96EK7 910 aaKnown RBP13.79□□□□□ -0.2
CLCNKA-202ENST00000375692 PYURFQ96I23 114 aa13.79□□□□□ -0.2
CLCNKA-202ENST00000375692 INPP5KQ9BT40 448 aa13.79□□□□□ -0.2
CLCNKA-202ENST00000375692 FBXO44Q9H4M3 255 aa13.79□□□□□ -0.2
CLCNKA-202ENST00000375692 DUSP21Q9H596 190 aa13.79□□□□□ -0.2
CLCNKA-202ENST00000375692 NECTIN3Q9NQS3 549 aa13.79□□□□□ -0.2
CLCNKA-202ENST00000375692 RASSF1Q9NS23 344 aa13.79□□□□□ -0.2
CLCNKA-202ENST00000375692 TMEM161AQ9NX61 479 aa13.79□□□□□ -0.2
CLCNKA-202ENST00000375692 TBX21Q9UL17 535 aa13.79□□□□□ -0.2
CLCNKA-202ENST00000375692 ABCG2Q9UNQ0 655 aa13.79□□□□□ -0.2
CLCNKA-202ENST00000375692 MYO1GB0I1T2 1018 aa13.78□□□□□ -0.2
CLCNKA-202ENST00000375692 M0QX08 132 aa13.78□□□□□ -0.2
CLCNKA-202ENST00000375692 STX7O15400 261 aaKnown RBP13.78□□□□□ -0.2
CLCNKA-202ENST00000375692 TLR5O60602 858 aa13.78□□□□□ -0.2
CLCNKA-202ENST00000375692 SEC24AO95486 1093 aa13.78□□□□□ -0.2
CLCNKA-202ENST00000375692 ZNF682O95780 498 aa13.78□□□□□ -0.2
CLCNKA-202ENST00000375692 OTCP00480 354 aa13.78□□□□□ -0.2
CLCNKA-202ENST00000375692 ALOX5P09917 674 aa13.78□□□□□ -0.2
CLCNKA-202ENST00000375692 SLC6A4P31645 630 aa13.78□□□□□ -0.2
CLCNKA-202ENST00000375692 RCVRNP35243 200 aa13.78□□□□□ -0.2
CLCNKA-202ENST00000375692 DSC1Q08554 894 aa13.78□□□□□ -0.2
CLCNKA-202ENST00000375692 CPZQ66K79 652 aa13.78□□□□□ -0.2
CLCNKA-202ENST00000375692 HIPK1Q86Z02 1210 aa13.78□□□□□ -0.2
CLCNKA-202ENST00000375692 CRIPAKQ8N1N5 446 aa13.78□□□□□ -0.2
CLCNKA-202ENST00000375692 SCAIQ8N9R8 606 aa13.78□□□□□ -0.2
CLCNKA-202ENST00000375692 ZNF540Q8NDQ6 660 aa13.78□□□□□ -0.2
CLCNKA-202ENST00000375692 HTRA1Q92743 480 aa13.78□□□□□ -0.2
CLCNKA-202ENST00000375692 TOX2Q96NM4 488 aa13.78□□□□□ -0.2
CLCNKA-202ENST00000375692 PSKH2Q96QS6 385 aa13.78□□□□□ -0.2
CLCNKA-202ENST00000375692 APOL5Q9BWW9 433 aa13.78□□□□□ -0.2
CLCNKA-202ENST00000375692 ASPSCR1Q9BZE9 553 aa13.78□□□□□ -0.2
CLCNKA-202ENST00000375692 ZNF229Q9UJW7 825 aa13.78□□□□□ -0.2
CLCNKA-202ENST00000375692 RAI2Q9Y5P3 530 aa13.78□□□□□ -0.2
CLCNKA-202ENST00000375692 TDRD15B5MCY1 1934 aaKnown RBP13.78□□□□□ -0.2
CLCNKA-202ENST00000375692 PER2O15055 1255 aa13.78□□□□□ -0.2
CLCNKA-202ENST00000375692 RGS14O43566 566 aa13.78□□□□□ -0.2
CLCNKA-202ENST00000375692 PRAMEF12O95522 483 aa13.78□□□□□ -0.2
CLCNKA-202ENST00000375692 LCKP06239 509 aa13.78□□□□□ -0.2
CLCNKA-202ENST00000375692 RETP07949 1114 aa13.78□□□□□ -0.2
CLCNKA-202ENST00000375692 CA5AP35218 305 aa13.78□□□□□ -0.2
CLCNKA-202ENST00000375692 NRIP1P48552 1158 aa13.78□□□□□ -0.2
CLCNKA-202ENST00000375692 MAPKAPK2P49137 400 aa13.78□□□□□ -0.2
CLCNKA-202ENST00000375692 RPS24P62847 133 aaKnown RBP13.78□□□□□ -0.2
CLCNKA-202ENST00000375692 ALG1LQ6GMV1 187 aa13.78□□□□□ -0.2
CLCNKA-202ENST00000375692 ZDHHC21Q8IVQ6 265 aa13.78□□□□□ -0.2
CLCNKA-202ENST00000375692 RGL4Q8IZJ4 473 aa13.78□□□□□ -0.2
CLCNKA-202ENST00000375692 ZNF566Q969W8 418 aa13.78□□□□□ -0.2
CLCNKA-202ENST00000375692 TRIM43Q96BQ3 446 aaPredicted RBP13.78□□□□□ -0.2
CLCNKA-202ENST00000375692 PYCR2Q96C36 320 aa13.78□□□□□ -0.2
CLCNKA-202ENST00000375692 LGALS12Q96DT0 336 aa13.78□□□□□ -0.2
CLCNKA-202ENST00000375692 REXO5Q96IC2 774 aaKnown RBP13.78□□□□□ -0.2
CLCNKA-202ENST00000375692 CASD1Q96PB1 797 aa13.78□□□□□ -0.2
CLCNKA-202ENST00000375692 SLIRPQ9GZT3 109 aaKnown RBP13.78□□□□□ -0.2
CLCNKA-202ENST00000375692 ABCB10Q9NRK6 738 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms