RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 ELF4Q99607 663 aaPredicted RBP6.5□□□□□ -1.37
UBR4-204ENST00000375254 DUSP9Q99956 384 aaKnown RBP6.5□□□□□ -1.37
UBR4-204ENST00000375254 KLQ9UEF7 1012 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 KIF25Q9UIL4 384 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 FAM230AA0A1W2PPH8 454 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 TVP23AA6NH52 213 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 ALDH1A2O94788 518 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 FGBP02675 491 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 SPP1P10451 314 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 TAS2R41P59536 307 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 NTRK2Q16620 822 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 SWSAP1Q6NVH7 229 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 CHRDL2Q6WN34 429 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.5□□□□□ -1.376e-8■■■■□ 26
UBR4-204ENST00000375254 SLC7A6OSQ96CW6 309 aaPredicted RBP6.5□□□□□ -1.37
UBR4-204ENST00000375254 SLC25A32Q9H2D1 315 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 LRTM1Q9HBL6 345 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 MTA2O94776 668 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 MT-ND1P03886 318 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 HNRNPLP14866 589 aaKnown RBP eCLIP6.5□□□□□ -1.371e-22■■■□□ 17.5
UBR4-204ENST00000375254 TAP2Q03519 686 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 LCP2Q13094 533 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 RALGPS1Q5JS13 557 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 KCNRGQ8N5I3 272 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 MAPK15Q8TD08 544 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 ZNF675Q8TD23 568 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 BTBD1Q9H0C5 482 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 TMEM27Q9HBJ8 222 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 BRD7Q9NPI1 651 aa6.5□□□□□ -1.37
UBR4-204ENST00000375254 TSR3Q9UJK0 312 aaKnown RBP6.5□□□□□ -1.37
UBR4-204ENST00000375254 GSG1L2A8MUP6 293 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 BHMG1C9JSJ3 638 aaPredicted RBP6.49□□□□□ -1.37
UBR4-204ENST00000375254 GCP02774 474 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 HSD3B1P14060 373 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 HLA-DMAP28067 261 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 TGM4P49221 684 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 ARSFP54793 590 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 ELP2Q6IA86 826 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 RTL4Q6ZR62 310 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 GALNT5Q7Z7M9 940 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 BCL2L14Q9BZR8 327 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 MOB1AQ9H8S9 216 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 SEMA3GQ9NS98 782 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 MGAT4CQ9UBM8 478 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 CXCR6O00574 342 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 ZMPSTE24O75844 475 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 ZMAT1Q5H9K5 638 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 ILDR2Q71H61 639 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 SV2AQ7L0J3 742 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 SMAP2Q8WU79 429 aaPredicted RBP6.49□□□□□ -1.37
UBR4-204ENST00000375254 V9GYS6 101 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 CPDO75976 1380 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 SLC33A1O00400 549 aaPredicted RBP6.49□□□□□ -1.37
UBR4-204ENST00000375254 RETP07949 1114 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 AZGP1P25311 298 aaKnown RBP6.49□□□□□ -1.37
UBR4-204ENST00000375254 DPY19L2P1Q6NXN4 242 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 DET1Q7L5Y6 550 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 MRPL41Q8IXM3 137 aaKnown RBP6.49□□□□□ -1.37
UBR4-204ENST00000375254 RIT1Q92963 219 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 AP5M1Q9H0R1 490 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 PLA2G4CQ9UP65 541 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 A0A0A6YYH2 397 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 A6NJ64 397 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 FGRP09769 529 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 C19orf35Q6ZS72 473 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 ZDHHC21Q8IVQ6 265 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 NLGN2Q8NFZ4 835 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 OR8J1Q8NGP2 316 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 RXFP2Q8WXD0 754 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 TMEM176AQ96HP8 235 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 ANKARQ7Z5J8 1434 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 A0A1W2PPM1 405 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 AQP9O43315 295 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 IGFALSP35858 605 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 DGKGP49619 791 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 DDX39BQ13838 428 aaKnown RBP6.49□□□□□ -1.37
UBR4-204ENST00000375254 FGFBP1Q14512 234 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 DPY19L1Q2PZI1 675 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 TAPT1Q6NXT6 567 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 ZNF512Q96ME7 567 aaPredicted RBP6.49□□□□□ -1.37
UBR4-204ENST00000375254 SNX15Q9NRS6 342 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 SPHK1Q9NYA1 384 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 ENTPD4Q9Y227 616 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 MAKP20794 623 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 FAM46CQ5VWP2 391 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 TMEM205Q6UW68 189 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.49□□□□□ -1.37
UBR4-204ENST00000375254 TBC1D10CQ8IV04 446 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 C12orf57Q99622 126 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 IL1R1P14778 569 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 TXNL4AP83876 142 aaKnown RBP6.49□□□□□ -1.37
UBR4-204ENST00000375254 PRAMEF13Q5VWM6 474 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 CHSY3Q70JA7 882 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 SSX7Q7RTT5 188 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 MINDY1Q8N5J2 469 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 PIGXQ8TBF5 258 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 KIAA1143Q96AT1 154 aaPredicted RBP6.49□□□□□ -1.37
UBR4-204ENST00000375254 KCTD12Q96CX2 325 aaKnown RBP6.49□□□□□ -1.37
UBR4-204ENST00000375254 MFFQ9GZY8 342 aa6.49□□□□□ -1.37
UBR4-204ENST00000375254 ABCB8Q9NUT2 735 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms