RNA–Protein interactions for RNA: ENST00000374843.8

HLA-DMA-201, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DMA, Length 1,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-201ENST00000374843 ILKAPQ9H0C8 392 aaPredicted RBP16.71■□□□□ 0.27
HLA-DMA-201ENST00000374843 DNAJC11Q9NVH1 559 aa16.71■□□□□ 0.27
HLA-DMA-201ENST00000374843 CACNA1EQ15878 2313 aa16.71■□□□□ 0.27
HLA-DMA-201ENST00000374843 E7ENX8 843 aa16.7■□□□□ 0.26
HLA-DMA-201ENST00000374843 YKT6O15498 198 aa16.7■□□□□ 0.26
HLA-DMA-201ENST00000374843 CCNT2O60583 730 aaKnown RBP16.7■□□□□ 0.26
HLA-DMA-201ENST00000374843 WDR47O94967 919 aa16.7■□□□□ 0.26
HLA-DMA-201ENST00000374843 ALOX15P16050 662 aaPredicted RBP16.7■□□□□ 0.26
HLA-DMA-201ENST00000374843 CCND1P24385 295 aa16.7■□□□□ 0.26
HLA-DMA-201ENST00000374843 GDF5P43026 501 aa16.7■□□□□ 0.26
HLA-DMA-201ENST00000374843 CDH13P55290 713 aa16.7■□□□□ 0.26
HLA-DMA-201ENST00000374843 PKNOX1P55347 436 aa16.7■□□□□ 0.26
HLA-DMA-201ENST00000374843 TBPL1P62380 186 aa16.7■□□□□ 0.26
HLA-DMA-201ENST00000374843 TAP2Q03519 686 aa16.7■□□□□ 0.26
HLA-DMA-201ENST00000374843 GRIK2Q13002 908 aa16.7■□□□□ 0.26
HLA-DMA-201ENST00000374843 TRAF3Q13114 568 aa16.7■□□□□ 0.26
HLA-DMA-201ENST00000374843 C1orf61Q13536 156 aa16.7■□□□□ 0.26
HLA-DMA-201ENST00000374843 SHBQ15464 509 aa16.7■□□□□ 0.26
HLA-DMA-201ENST00000374843 C17orf82Q86X59 251 aaPredicted RBP16.7■□□□□ 0.26
HLA-DMA-201ENST00000374843 RBM12BQ8IXT5 1001 aaKnown RBP16.7■□□□□ 0.26
HLA-DMA-201ENST00000374843 NAGSQ8N159 534 aa16.7■□□□□ 0.26
HLA-DMA-201ENST00000374843 RAB42Q8N4Z0 105 aa16.7■□□□□ 0.26
HLA-DMA-201ENST00000374843 TEX9Q8N6V9 391 aa16.7■□□□□ 0.26
HLA-DMA-201ENST00000374843 ZNF781Q8N8C0 355 aa16.7■□□□□ 0.26
HLA-DMA-201ENST00000374843 OR52E1Q8NGJ3 308 aa16.7■□□□□ 0.26
HLA-DMA-201ENST00000374843 PIWIL2Q8TC59 973 aaKnown RBP16.7■□□□□ 0.26
HLA-DMA-201ENST00000374843 LMX1AQ8TE12 382 aa16.7■□□□□ 0.26
HLA-DMA-201ENST00000374843 SLC37A2Q8TED4 501 aa16.7■□□□□ 0.26
HLA-DMA-201ENST00000374843 TRPC4APQ8TEL6 797 aa16.7■□□□□ 0.26
HLA-DMA-201ENST00000374843 CXorf40BQ96DE9 158 aa16.7■□□□□ 0.26
HLA-DMA-201ENST00000374843 CCT8L2Q96SF2 557 aa16.7■□□□□ 0.26
HLA-DMA-201ENST00000374843 SIKE1Q9BRV8 207 aa16.7■□□□□ 0.26
HLA-DMA-201ENST00000374843 LNPEPQ9UIQ6 1025 aa16.7■□□□□ 0.26
HLA-DMA-201ENST00000374843 ICKQ9UPZ9 632 aa16.7■□□□□ 0.26
HLA-DMA-201ENST00000374843 TDRKHQ9Y2W6 561 aaKnown RBP16.7■□□□□ 0.26
HLA-DMA-201ENST00000374843 PCDHGA5Q9Y5G8 931 aa16.7■□□□□ 0.26
HLA-DMA-201ENST00000374843 A0A1B0GTQ1 180 aa16.69■□□□□ 0.26
HLA-DMA-201ENST00000374843 OR7A17O14581 309 aa16.69■□□□□ 0.26
HLA-DMA-201ENST00000374843 DFNA5O60443 496 aa16.69■□□□□ 0.26
HLA-DMA-201ENST00000374843 KATNA1O75449 491 aa16.69■□□□□ 0.26
HLA-DMA-201ENST00000374843 ESRRBO95718 433 aa16.69■□□□□ 0.26
HLA-DMA-201ENST00000374843 OTCP00480 354 aa16.69■□□□□ 0.26
HLA-DMA-201ENST00000374843 EPB42P16452 691 aa16.69■□□□□ 0.26
HLA-DMA-201ENST00000374843 EPHA8P29322 1005 aaPredicted RBP16.69■□□□□ 0.26
HLA-DMA-201ENST00000374843 ARRB1P49407 418 aaPredicted RBP16.69■□□□□ 0.26
HLA-DMA-201ENST00000374843 CDC16Q13042 620 aa16.69■□□□□ 0.26
HLA-DMA-201ENST00000374843 PRKG2Q13237 762 aa16.69■□□□□ 0.26
HLA-DMA-201ENST00000374843 NAE1Q13564 534 aa16.69■□□□□ 0.26
HLA-DMA-201ENST00000374843 CAPN13Q6MZZ7 669 aaPredicted RBP16.69■□□□□ 0.26
HLA-DMA-201ENST00000374843 SLC23A3Q6PIS1 610 aa16.69■□□□□ 0.26
HLA-DMA-201ENST00000374843 ZC3H14Q6PJT7 736 aaKnown RBP16.69■□□□□ 0.26
HLA-DMA-201ENST00000374843 IL27RAQ6UWB1 636 aa16.69■□□□□ 0.26
HLA-DMA-201ENST00000374843 PRR23BQ6ZRT6 265 aa16.69■□□□□ 0.26
HLA-DMA-201ENST00000374843 KANSL1Q7Z3B3 1105 aa16.69■□□□□ 0.26
HLA-DMA-201ENST00000374843 SYTL1Q8IYJ3 562 aa16.69■□□□□ 0.26
HLA-DMA-201ENST00000374843 CHCHD4Q8N4Q1 142 aa16.69■□□□□ 0.26
HLA-DMA-201ENST00000374843 FAM46DQ8NEK8 389 aa16.69■□□□□ 0.26
HLA-DMA-201ENST00000374843 OR2L8Q8NGY9 312 aa16.69■□□□□ 0.26
HLA-DMA-201ENST00000374843 ZDHHC1Q8WTX9 485 aa16.69■□□□□ 0.26
HLA-DMA-201ENST00000374843 STON2Q8WXE9 905 aa16.69■□□□□ 0.26
HLA-DMA-201ENST00000374843 ATG10Q9H0Y0 220 aa16.69■□□□□ 0.26
HLA-DMA-201ENST00000374843 SLC40A1Q9NP59 571 aa16.69■□□□□ 0.26
HLA-DMA-201ENST00000374843 TNFRSF12AQ9NP84 129 aa16.69■□□□□ 0.26
HLA-DMA-201ENST00000374843 SEMA4BQ9NPR2 832 aaPredicted RBP16.69■□□□□ 0.26
HLA-DMA-201ENST00000374843 CCDC177Q9NQR7 707 aaPredicted RBP16.69■□□□□ 0.26
HLA-DMA-201ENST00000374843 GPRC5BQ9NZH0 403 aa16.69■□□□□ 0.26
HLA-DMA-201ENST00000374843 CPNE7Q9UBL6 633 aa16.69■□□□□ 0.26
HLA-DMA-201ENST00000374843 CIDEBQ9UHD4 219 aa16.69■□□□□ 0.26
HLA-DMA-201ENST00000374843 PLAGL1Q9UM63 463 aa16.69■□□□□ 0.26
HLA-DMA-201ENST00000374843 YY2O15391 372 aa16.68■□□□□ 0.26
HLA-DMA-201ENST00000374843 SNX3O60493 162 aa16.68■□□□□ 0.26
HLA-DMA-201ENST00000374843 FGF4P08620 206 aa16.68■□□□□ 0.26
HLA-DMA-201ENST00000374843 TROVE2P10155 538 aaKnown RBP eCLIP16.68■□□□□ 0.26
HLA-DMA-201ENST00000374843 TSPAN8P19075 237 aa16.68■□□□□ 0.26
HLA-DMA-201ENST00000374843 SHMT2P34897 504 aa16.68■□□□□ 0.26
HLA-DMA-201ENST00000374843 FASLGP48023 281 aa16.68■□□□□ 0.26
HLA-DMA-201ENST00000374843 RPL14P50914 215 aaKnown RBP16.68■□□□□ 0.26
HLA-DMA-201ENST00000374843 SH3BP2P78314 561 aa16.68■□□□□ 0.26
HLA-DMA-201ENST00000374843 E2F2Q14209 437 aa16.68■□□□□ 0.26
HLA-DMA-201ENST00000374843 KRT33BQ14525 404 aa16.68■□□□□ 0.26
HLA-DMA-201ENST00000374843 GGTA1PQ4G0N0 100 aa16.68■□□□□ 0.26
HLA-DMA-201ENST00000374843 KANK2Q63ZY3 851 aa16.68■□□□□ 0.26
HLA-DMA-201ENST00000374843 OGFOD3Q6PK18 319 aa16.68■□□□□ 0.26
HLA-DMA-201ENST00000374843 GPRIN3Q6ZVF9 776 aa16.68■□□□□ 0.26
HLA-DMA-201ENST00000374843 PIGWQ7Z7B1 504 aa16.68■□□□□ 0.26
HLA-DMA-201ENST00000374843 CPLX4Q7Z7G2 160 aa16.68■□□□□ 0.26
HLA-DMA-201ENST00000374843 SYVN1Q86TM6 617 aa16.68■□□□□ 0.26
HLA-DMA-201ENST00000374843 THOC6Q86W42 341 aaKnown RBP16.68■□□□□ 0.26
HLA-DMA-201ENST00000374843 LINC01555Q8NAE3 123 aa16.68■□□□□ 0.26
HLA-DMA-201ENST00000374843 OR52B6Q8NGF0 335 aa16.68■□□□□ 0.26
HLA-DMA-201ENST00000374843 SMPDL3AQ92484 453 aa16.68■□□□□ 0.26
HLA-DMA-201ENST00000374843 PYCR2Q96C36 320 aa16.68■□□□□ 0.26
HLA-DMA-201ENST00000374843 FAR2Q96K12 515 aa16.68■□□□□ 0.26
HLA-DMA-201ENST00000374843 IL17FQ96PD4 163 aa16.68■□□□□ 0.26
HLA-DMA-201ENST00000374843 OR4K3Q96R72 315 aa16.68■□□□□ 0.26
HLA-DMA-201ENST00000374843 NTMT1Q9BV86 223 aa16.68■□□□□ 0.26
HLA-DMA-201ENST00000374843 TRIM55Q9BYV6 548 aa16.68■□□□□ 0.26
HLA-DMA-201ENST00000374843 FAM107BQ9H098 131 aa16.68■□□□□ 0.26
HLA-DMA-201ENST00000374843 PCBD2Q9H0N5 130 aa16.68■□□□□ 0.26
HLA-DMA-201ENST00000374843 NOL11Q9H8H0 719 aaKnown RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms