RNA–Protein interactions for RNA: ENST00000374837.7

MAP1LC3A-202, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 3 BASIC

Gene MAP1LC3A, Length 961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-202ENST00000374837 KBTBD12Q3ZCT8 623 aa20.29■□□□□ 0.84
MAP1LC3A-202ENST00000374837 SPESP1Q6UW49 350 aa20.29■□□□□ 0.84
MAP1LC3A-202ENST00000374837 TRIM73Q86UV7 250 aa20.29■□□□□ 0.84
MAP1LC3A-202ENST00000374837 CTAGE3PQ8IX95 158 aa20.29■□□□□ 0.84
MAP1LC3A-202ENST00000374837 IFT20Q8IY31 132 aa20.29■□□□□ 0.84
MAP1LC3A-202ENST00000374837 D2HGDHQ8N465 521 aa20.29■□□□□ 0.84
MAP1LC3A-202ENST00000374837 ZNF248Q8NDW4 579 aa20.29■□□□□ 0.84
MAP1LC3A-202ENST00000374837 OR9A1PQ8NGU1 263 aa20.29■□□□□ 0.84
MAP1LC3A-202ENST00000374837 DENND1AQ8TEH3 1009 aa20.29■□□□□ 0.84
MAP1LC3A-202ENST00000374837 NAF1Q96HR8 494 aaKnown RBP20.29■□□□□ 0.84
MAP1LC3A-202ENST00000374837 VPS39Q96JC1 886 aa20.29■□□□□ 0.84
MAP1LC3A-202ENST00000374837 DCBLD2Q96PD2 775 aa20.29■□□□□ 0.84
MAP1LC3A-202ENST00000374837 TRAPPC9Q96Q05 1148 aa20.29■□□□□ 0.84
MAP1LC3A-202ENST00000374837 FMO2Q99518 471 aa20.29■□□□□ 0.84
MAP1LC3A-202ENST00000374837 CPNE1Q99829 537 aa20.29■□□□□ 0.84
MAP1LC3A-202ENST00000374837 PITPNM3Q9BZ71 974 aa20.29■□□□□ 0.84
MAP1LC3A-202ENST00000374837 ASPSCR1Q9BZE9 553 aa20.29■□□□□ 0.84
MAP1LC3A-202ENST00000374837 TSPYL1Q9H0U9 437 aa20.29■□□□□ 0.84
MAP1LC3A-202ENST00000374837 NINJ2Q9NZG7 142 aa20.29■□□□□ 0.84
MAP1LC3A-202ENST00000374837 ACSL6Q9UKU0 697 aa20.29■□□□□ 0.84
MAP1LC3A-202ENST00000374837 MTO1Q9Y2Z2 717 aaKnown RBP20.29■□□□□ 0.84
MAP1LC3A-202ENST00000374837 POLR1CO15160 346 aaPredicted RBP20.28■□□□□ 0.84
MAP1LC3A-202ENST00000374837 PVRP15151 417 aa20.28■□□□□ 0.84
MAP1LC3A-202ENST00000374837 ST6GAL1P15907 406 aa20.28■□□□□ 0.84
MAP1LC3A-202ENST00000374837 TAS2R39P59534 338 aa20.28■□□□□ 0.84
MAP1LC3A-202ENST00000374837 LRRC8EQ6NSJ5 796 aa20.28■□□□□ 0.84
MAP1LC3A-202ENST00000374837 CEACAM20Q6UY09 585 aa20.28■□□□□ 0.84
MAP1LC3A-202ENST00000374837 TAX1BP1Q86VP1 789 aa20.28■□□□□ 0.84
MAP1LC3A-202ENST00000374837 ZFAND4Q86XD8 727 aa20.28■□□□□ 0.84
MAP1LC3A-202ENST00000374837 PPM1NQ8N819 430 aa20.28■□□□□ 0.84
MAP1LC3A-202ENST00000374837 FBXO15Q8NCQ5 510 aaPredicted RBP20.28■□□□□ 0.84
MAP1LC3A-202ENST00000374837 LINGO1Q96FE5 620 aa20.28■□□□□ 0.84
MAP1LC3A-202ENST00000374837 OR6C1Q96RD1 312 aa20.28■□□□□ 0.84
MAP1LC3A-202ENST00000374837 PKP4Q99569 1192 aa20.28■□□□□ 0.84
MAP1LC3A-202ENST00000374837 RAB11FIP5Q9BXF6 653 aa20.28■□□□□ 0.84
MAP1LC3A-202ENST00000374837 KLHL25Q9H0H3 589 aa20.28■□□□□ 0.84
MAP1LC3A-202ENST00000374837 SPATA7Q9P0W8 599 aa20.28■□□□□ 0.84
MAP1LC3A-202ENST00000374837 TXNDC16Q9P2K2 825 aa20.28■□□□□ 0.84
MAP1LC3A-202ENST00000374837 LNPEPQ9UIQ6 1025 aa20.28■□□□□ 0.84
MAP1LC3A-202ENST00000374837 BTRCQ9Y297 605 aa20.28■□□□□ 0.84
MAP1LC3A-202ENST00000374837 ESPNB1AK53 854 aa20.27■□□□□ 0.84
MAP1LC3A-202ENST00000374837 MYO1CO00159 1063 aa20.27■□□□□ 0.84
MAP1LC3A-202ENST00000374837 ZBTB14O43829 449 aa20.27■□□□□ 0.84
MAP1LC3A-202ENST00000374837 TSPAN12O95859 305 aa20.27■□□□□ 0.84
MAP1LC3A-202ENST00000374837 EBLN1P0CF75 366 aa20.27■□□□□ 0.84
MAP1LC3A-202ENST00000374837 GP5P40197 560 aa20.27■□□□□ 0.84
MAP1LC3A-202ENST00000374837 IL2P60568 153 aa20.27■□□□□ 0.84
MAP1LC3A-202ENST00000374837 ILF2Q12905 390 aaKnown RBP20.27■□□□□ 0.84
MAP1LC3A-202ENST00000374837 CYP2A13Q16696 494 aa20.27■□□□□ 0.84
MAP1LC3A-202ENST00000374837 UBAP2Q5T6F2 1119 aaKnown RBP20.27■□□□□ 0.84
MAP1LC3A-202ENST00000374837 TMEM207Q6UWW9 146 aa20.27■□□□□ 0.84
MAP1LC3A-202ENST00000374837 UBE2R2Q712K3 238 aaPredicted RBP20.27■□□□□ 0.84
MAP1LC3A-202ENST00000374837 RAB42Q8N4Z0 105 aa20.27■□□□□ 0.84
MAP1LC3A-202ENST00000374837 HMGCLL1Q8TB92 370 aa20.27■□□□□ 0.84
MAP1LC3A-202ENST00000374837 DLG3Q92796 817 aa20.27■□□□□ 0.84
MAP1LC3A-202ENST00000374837 TEFMQ96QE5 360 aaKnown RBP20.27■□□□□ 0.84
MAP1LC3A-202ENST00000374837 SOHLH2Q9NX45 425 aa20.27■□□□□ 0.84
MAP1LC3A-202ENST00000374837 NFU1Q9UMS0 254 aa20.27■□□□□ 0.84
MAP1LC3A-202ENST00000374837 ADAMTS20P59510 1910 aa20.27■□□□□ 0.84
MAP1LC3A-202ENST00000374837 SETXQ7Z333 2677 aaKnown RBP20.27■□□□□ 0.83
MAP1LC3A-202ENST00000374837 A0A087WV48 116 aa20.26■□□□□ 0.83
MAP1LC3A-202ENST00000374837 RRP8O43159 456 aaKnown RBP20.26■□□□□ 0.83
MAP1LC3A-202ENST00000374837 PRICKLE3O43900 615 aaPredicted RBP20.26■□□□□ 0.83
MAP1LC3A-202ENST00000374837 FAM155BO75949 473 aa20.26■□□□□ 0.83
MAP1LC3A-202ENST00000374837 CD82P27701 267 aa20.26■□□□□ 0.83
MAP1LC3A-202ENST00000374837 MAP4P27816 1152 aaKnown RBP20.26■□□□□ 0.83
MAP1LC3A-202ENST00000374837 ACY1Q03154 408 aa20.26■□□□□ 0.83
MAP1LC3A-202ENST00000374837 FASTKQ14296 549 aaKnown RBP20.26■□□□□ 0.83
MAP1LC3A-202ENST00000374837 IL11RAQ14626 422 aa20.26■□□□□ 0.83
MAP1LC3A-202ENST00000374837 EFTUD2Q15029 972 aaKnown RBP eCLIP20.26■□□□□ 0.83
MAP1LC3A-202ENST00000374837 SLC5A12Q1EHB4 618 aa20.26■□□□□ 0.83
MAP1LC3A-202ENST00000374837 GRTP1Q5TC63 336 aa20.26■□□□□ 0.83
MAP1LC3A-202ENST00000374837 C19orf48Q6RUI8 117 aa20.26■□□□□ 0.83
MAP1LC3A-202ENST00000374837 FAM20CQ8IXL6 584 aa20.26■□□□□ 0.83
MAP1LC3A-202ENST00000374837 MYO1HQ8N1T3 1032 aa20.26■□□□□ 0.83
MAP1LC3A-202ENST00000374837 KCNE4Q8WWG9 221 aa20.26■□□□□ 0.83
MAP1LC3A-202ENST00000374837 SLC22A18Q96BI1 424 aa20.26■□□□□ 0.83
MAP1LC3A-202ENST00000374837 RBBP8Q99708 897 aa20.26■□□□□ 0.83
MAP1LC3A-202ENST00000374837 ZPBPQ9BS86 351 aa20.26■□□□□ 0.83
MAP1LC3A-202ENST00000374837 SPRY4Q9C004 299 aa20.26■□□□□ 0.83
MAP1LC3A-202ENST00000374837 CDC42EP4Q9H3Q1 356 aaKnown RBP20.26■□□□□ 0.83
MAP1LC3A-202ENST00000374837 ADAMTS6Q9UKP5 1117 aa20.26■□□□□ 0.83
MAP1LC3A-202ENST00000374837 PCDHB11Q9Y5F2 797 aa20.26■□□□□ 0.83
MAP1LC3A-202ENST00000374837 A0A0J9YY10 115 aa20.25■□□□□ 0.83
MAP1LC3A-202ENST00000374837 ERGP11308 486 aa20.25■□□□□ 0.83
MAP1LC3A-202ENST00000374837 FGF5P12034 268 aa20.25■□□□□ 0.83
MAP1LC3A-202ENST00000374837 TUBB3Q13509 450 aa20.25■□□□□ 0.83
MAP1LC3A-202ENST00000374837 ZNF460Q14592 562 aa20.25■□□□□ 0.83
MAP1LC3A-202ENST00000374837 ZIC1Q15915 447 aa20.25■□□□□ 0.83
MAP1LC3A-202ENST00000374837 TMTC4Q5T4D3 741 aa20.25■□□□□ 0.83
MAP1LC3A-202ENST00000374837 LRRC69Q6ZNQ3 347 aa20.25■□□□□ 0.83
MAP1LC3A-202ENST00000374837 CEP97Q8IW35 865 aa20.25■□□□□ 0.83
MAP1LC3A-202ENST00000374837 SLC12A9Q9BXP2 914 aa20.25■□□□□ 0.83
MAP1LC3A-202ENST00000374837 PDE7BQ9NP56 450 aa20.25■□□□□ 0.83
MAP1LC3A-202ENST00000374837 APC2O95996 2303 aa20.25■□□□□ 0.83
MAP1LC3A-202ENST00000374837 A0A1W2PPV9 198 aa20.24■□□□□ 0.83
MAP1LC3A-202ENST00000374837 SLC16A5O15375 505 aa20.24■□□□□ 0.83
MAP1LC3A-202ENST00000374837 SYF2O95926 243 aaKnown RBP20.24■□□□□ 0.83
MAP1LC3A-202ENST00000374837 C8GP07360 202 aa20.24■□□□□ 0.83
MAP1LC3A-202ENST00000374837 ITPKBP27987 946 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms