RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 RSPH1Q8WYR4 309 aa4.77□□□□□ -1.65
USP48-202ENST00000374730 TBC1D31Q96DN5 1066 aa4.77□□□□□ -1.65
USP48-202ENST00000374730 PRR11Q96HE9 360 aaPredicted RBP4.77□□□□□ -1.65
USP48-202ENST00000374730 RSRC1Q96IZ7 334 aaKnown RBP4.77□□□□□ -1.65
USP48-202ENST00000374730 ZNF778Q96MU6 729 aa4.77□□□□□ -1.65
USP48-202ENST00000374730 FCRL5Q96RD9 977 aa4.77□□□□□ -1.65
USP48-202ENST00000374730 KCNK16Q96T55 309 aa4.77□□□□□ -1.65
USP48-202ENST00000374730 SORT1Q99523 831 aa4.77□□□□□ -1.65
USP48-202ENST00000374730 IL12RB2Q99665 862 aa4.77□□□□□ -1.65
USP48-202ENST00000374730 KIFC1Q9BW19 673 aa4.77□□□□□ -1.65
USP48-202ENST00000374730 CCDC106Q9BWC9 280 aa4.77□□□□□ -1.65
USP48-202ENST00000374730 C1orf21Q9H246 121 aa4.77□□□□□ -1.65
USP48-202ENST00000374730 DENND2DQ9H6A0 471 aaPredicted RBP4.77□□□□□ -1.65
USP48-202ENST00000374730 CATSPERBQ9H7T0 1116 aa4.77□□□□□ -1.65
USP48-202ENST00000374730 DCLRE1BQ9H816 532 aa4.77□□□□□ -1.65
USP48-202ENST00000374730 MRM3Q9HC36 420 aaKnown RBP4.77□□□□□ -1.65
USP48-202ENST00000374730 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.77□□□□□ -1.65
USP48-202ENST00000374730 COPG2Q9UBF2 871 aa4.77□□□□□ -1.65
USP48-202ENST00000374730 CACNG4Q9UBN1 327 aa4.77□□□□□ -1.65
USP48-202ENST00000374730 OR12D3Q9UGF7 316 aa4.77□□□□□ -1.65
USP48-202ENST00000374730 PADI3Q9ULW8 664 aa4.77□□□□□ -1.65
USP48-202ENST00000374730 MED16Q9Y2X0 877 aa4.77□□□□□ -1.65
USP48-202ENST00000374730 PSAT1Q9Y617 370 aa4.77□□□□□ -1.65
USP48-202ENST00000374730 GBF1Q92538 1859 aa4.77□□□□□ -1.65
USP48-202ENST00000374730 VGLL3A8MV65 326 aa4.76□□□□□ -1.65
USP48-202ENST00000374730 F5H423 210 aaPredicted RBP4.76□□□□□ -1.65
USP48-202ENST00000374730 FAM227AF5H4B4 570 aa4.76□□□□□ -1.65
USP48-202ENST00000374730 F8W8V4 182 aa4.76□□□□□ -1.65
USP48-202ENST00000374730 SPECC1L-ADORA2AF8WAN1 911 aa4.76□□□□□ -1.65
USP48-202ENST00000374730 H3BML4 177 aa4.76□□□□□ -1.65
USP48-202ENST00000374730 TMEM189-UBE2V1I3L0A0 370 aa4.76□□□□□ -1.65
USP48-202ENST00000374730 ZNF195O14628 629 aa4.76□□□□□ -1.65
USP48-202ENST00000374730 PIP5K1CO60331 668 aa4.76□□□□□ -1.65
USP48-202ENST00000374730 MGEA5O60502 916 aa4.76□□□□□ -1.65
USP48-202ENST00000374730 DIAPH2O60879 1101 aa4.76□□□□□ -1.65
USP48-202ENST00000374730 USP12O75317 370 aa4.76□□□□□ -1.65
USP48-202ENST00000374730 ANXA9O76027 345 aa4.76□□□□□ -1.65
USP48-202ENST00000374730 B3GAT3O94766 335 aa4.76□□□□□ -1.65
USP48-202ENST00000374730 KLHL2O95198 593 aa4.76□□□□□ -1.65
USP48-202ENST00000374730 LATS1O95835 1130 aa4.76□□□□□ -1.65
USP48-202ENST00000374730 TOP3BO95985 862 aaKnown RBP4.76□□□□□ -1.65
USP48-202ENST00000374730 ALDH2P05091 517 aa4.76□□□□□ -1.65
USP48-202ENST00000374730 PDHA1P08559 390 aa4.76□□□□□ -1.65
USP48-202ENST00000374730 IL6RP08887 468 aaPredicted RBP4.76□□□□□ -1.65
USP48-202ENST00000374730 ERVK-10P10266 1014 aa4.76□□□□□ -1.65
USP48-202ENST00000374730 RALBP11234 206 aa4.76□□□□□ -1.65
USP48-202ENST00000374730 CPA3P15088 417 aa4.76□□□□□ -1.65
USP48-202ENST00000374730 CTGFP29279 349 aa4.76□□□□□ -1.65
USP48-202ENST00000374730 TYK2P29597 1187 aa4.76□□□□□ -1.65
USP48-202ENST00000374730 PRDX6P30041 224 aa4.76□□□□□ -1.65
USP48-202ENST00000374730 CD52P31358 61 aa4.76□□□□□ -1.65
USP48-202ENST00000374730 CCR1P32246 355 aa4.76□□□□□ -1.65
USP48-202ENST00000374730 SLC1A6P48664 564 aa4.76□□□□□ -1.65
USP48-202ENST00000374730 GEMP55040 296 aa4.76□□□□□ -1.65
USP48-202ENST00000374730 ABCE1P61221 599 aaKnown RBP4.76□□□□□ -1.65
USP48-202ENST00000374730 SREBF2Q12772 1141 aa4.76□□□□□ -1.65
USP48-202ENST00000374730 LPIN1Q14693 890 aa4.76□□□□□ -1.65
USP48-202ENST00000374730 UGP2Q16851 508 aa4.76□□□□□ -1.65
USP48-202ENST00000374730 TRIM71Q2Q1W2 868 aaKnown RBP4.76□□□□□ -1.65
USP48-202ENST00000374730 PCID2Q5JVF3 399 aa4.76□□□□□ -1.65
USP48-202ENST00000374730 RGMBQ6NW40 437 aa4.76□□□□□ -1.65
USP48-202ENST00000374730 RINLQ6ZS11 566 aa4.76□□□□□ -1.65
USP48-202ENST00000374730 ZCCHC23Q6ZST2 131 aa4.76□□□□□ -1.65
USP48-202ENST00000374730 CTU1Q7Z7A3 348 aaKnown RBP4.76□□□□□ -1.65
USP48-202ENST00000374730 KCNMB4Q86W47 210 aa4.76□□□□□ -1.65
USP48-202ENST00000374730 MYLK4Q86YV6 388 aaPredicted RBP4.76□□□□□ -1.65
USP48-202ENST00000374730 LRRC49Q8IUZ0 686 aa4.76□□□□□ -1.65
USP48-202ENST00000374730 C10orf107Q8IVU9 208 aa4.76□□□□□ -1.65
USP48-202ENST00000374730 KRT78Q8N1N4 520 aa4.76□□□□□ -1.65
USP48-202ENST00000374730 THEM5Q8N1Q8 247 aa4.76□□□□□ -1.65
USP48-202ENST00000374730 ATPAF2Q8N5M1 289 aa4.76□□□□□ -1.65
USP48-202ENST00000374730 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.76□□□□□ -1.65
USP48-202ENST00000374730 DNAAF3Q8N9W5 541 aa4.76□□□□□ -1.65
USP48-202ENST00000374730 KLHDC9Q8NEP7 349 aa4.76□□□□□ -1.65
USP48-202ENST00000374730 OR10T2Q8NGX3 314 aa4.76□□□□□ -1.65
USP48-202ENST00000374730 RDH11Q8TC12 318 aa4.76□□□□□ -1.65
USP48-202ENST00000374730 URGCPQ8TCY9 931 aa4.76□□□□□ -1.65
USP48-202ENST00000374730 PPP4R1Q8TF05 950 aa4.76□□□□□ -1.65
USP48-202ENST00000374730 DIS3LQ8TF46 1054 aaKnown RBP4.76□□□□□ -1.65
USP48-202ENST00000374730 NSMCE1Q8WV22 266 aa4.76□□□□□ -1.65
USP48-202ENST00000374730 SNRNP27Q8WVK2 155 aaKnown RBP4.76□□□□□ -1.65
USP48-202ENST00000374730 TRIB2Q92519 343 aa4.76□□□□□ -1.65
USP48-202ENST00000374730 MCUR1Q96AQ8 359 aa4.76□□□□□ -1.65
USP48-202ENST00000374730 REPS1Q96D71 796 aa4.76□□□□□ -1.65
USP48-202ENST00000374730 VPS39Q96JC1 886 aa4.76□□□□□ -1.65
USP48-202ENST00000374730 TBATAQ96M53 351 aa4.76□□□□□ -1.65
USP48-202ENST00000374730 LRGUKQ96M69 825 aa4.76□□□□□ -1.65
USP48-202ENST00000374730 SERPINB11Q96P15 392 aa4.76□□□□□ -1.65
USP48-202ENST00000374730 AGAP3Q96P47 875 aa4.76□□□□□ -1.65
USP48-202ENST00000374730 NUDCD1Q96RS6 583 aa4.76□□□□□ -1.65
USP48-202ENST00000374730 GPR22Q99680 433 aa4.76□□□□□ -1.65
USP48-202ENST00000374730 TBL1YQ9BQ87 522 aa4.76□□□□□ -1.65
USP48-202ENST00000374730 PAAF1Q9BRP4 392 aa4.76□□□□□ -1.65
USP48-202ENST00000374730 C20orf27Q9GZN8 174 aa4.76□□□□□ -1.65
USP48-202ENST00000374730 RHOJQ9H4E5 214 aa4.76□□□□□ -1.65
USP48-202ENST00000374730 GLOD4Q9HC38 313 aa4.76□□□□□ -1.65
USP48-202ENST00000374730 BATF3Q9NR55 127 aa4.76□□□□□ -1.65
USP48-202ENST00000374730 ABCC13Q9NSE7 274 aa4.76□□□□□ -1.65
USP48-202ENST00000374730 TMLHEQ9NVH6 421 aa4.76□□□□□ -1.65
USP48-202ENST00000374730 PIH1D1Q9NWS0 290 aaKnown RBP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms