RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 DOK1Q99704 481 aa13.61□□□□□ -0.23
HMGCL-203ENST00000374490 EMILIN2Q9BXX0 1053 aa13.61□□□□□ -0.23
HMGCL-203ENST00000374490 KCNH6Q9H252 994 aa13.61□□□□□ -0.23
HMGCL-203ENST00000374490 PIF1Q9H611 641 aa13.61□□□□□ -0.23
HMGCL-203ENST00000374490 ACTR8Q9H981 624 aa13.61□□□□□ -0.23
HMGCL-203ENST00000374490 CXorf21Q9HAI6 301 aa13.61□□□□□ -0.23
HMGCL-203ENST00000374490 IL21Q9HBE4 155 aa13.61□□□□□ -0.23
HMGCL-203ENST00000374490 ZNF334Q9HCZ1 680 aaPredicted RBP13.61□□□□□ -0.23
HMGCL-203ENST00000374490 HPS4Q9NQG7 708 aa13.61□□□□□ -0.23
HMGCL-203ENST00000374490 TMED5Q9Y3A6 229 aa13.61□□□□□ -0.23
HMGCL-203ENST00000374490 RWDD3Q9Y3V2 267 aa13.61□□□□□ -0.23
HMGCL-203ENST00000374490 TRBV5-3A0A0A0MS03 114 aa13.61□□□□□ -0.23
HMGCL-203ENST00000374490 C16orf96A6NNT2 1141 aa13.61□□□□□ -0.23
HMGCL-203ENST00000374490 CXCR6O00574 342 aa13.61□□□□□ -0.23
HMGCL-203ENST00000374490 FFAR3O14843 346 aa13.61□□□□□ -0.23
HMGCL-203ENST00000374490 KPNA5O15131 536 aa13.61□□□□□ -0.23
HMGCL-203ENST00000374490 GPR42O15529 346 aa13.61□□□□□ -0.23
HMGCL-203ENST00000374490 SMAD6O43541 496 aaKnown RBP13.61□□□□□ -0.23
HMGCL-203ENST00000374490 CPNE6O95741 557 aa13.61□□□□□ -0.23
HMGCL-203ENST00000374490 LRG1P02750 347 aa13.61□□□□□ -0.23
HMGCL-203ENST00000374490 ALPLP05186 524 aa13.61□□□□□ -0.23
HMGCL-203ENST00000374490 OR56A5P0C7T3 313 aa13.61□□□□□ -0.23
HMGCL-203ENST00000374490 LINC00271P0C7V0 271 aa13.61□□□□□ -0.23
HMGCL-203ENST00000374490 UGT1A1P22309 533 aa13.61□□□□□ -0.23
HMGCL-203ENST00000374490 UGT1A4P22310 534 aa13.61□□□□□ -0.23
HMGCL-203ENST00000374490 S100A3P33764 101 aa13.61□□□□□ -0.23
HMGCL-203ENST00000374490 UGT1A3P35503 534 aa13.61□□□□□ -0.23
HMGCL-203ENST00000374490 UGT1A5P35504 534 aa13.61□□□□□ -0.23
HMGCL-203ENST00000374490 HNMTP50135 292 aa13.61□□□□□ -0.23
HMGCL-203ENST00000374490 RPS14P62263 151 aaKnown RBP13.61□□□□□ -0.23
HMGCL-203ENST00000374490 ZNF33BQ06732 778 aa13.61□□□□□ -0.23
HMGCL-203ENST00000374490 TUBA3CQ13748 450 aa13.61□□□□□ -0.23
HMGCL-203ENST00000374490 ARHGEF7Q14155 803 aa13.61□□□□□ -0.23
HMGCL-203ENST00000374490 CBX2Q14781 532 aaPredicted RBP13.61□□□□□ -0.23
HMGCL-203ENST00000374490 LRIF1Q5T3J3 769 aa13.61□□□□□ -0.23
HMGCL-203ENST00000374490 TMEM214Q6NUQ4 689 aaKnown RBP13.61□□□□□ -0.23
HMGCL-203ENST00000374490 GPR149Q86SP6 731 aa13.61□□□□□ -0.23
HMGCL-203ENST00000374490 ADHFE1Q8IWW8 467 aa13.61□□□□□ -0.23
HMGCL-203ENST00000374490 ELMOD1Q8N336 334 aa13.61□□□□□ -0.23
HMGCL-203ENST00000374490 TMEM132CQ8N3T6 1108 aa13.61□□□□□ -0.23
HMGCL-203ENST00000374490 ZNF555Q8NEP9 628 aa13.61□□□□□ -0.23
HMGCL-203ENST00000374490 PJA1Q8NG27 643 aa13.61□□□□□ -0.23
HMGCL-203ENST00000374490 OR6K2Q8NGY2 324 aa13.61□□□□□ -0.23
HMGCL-203ENST00000374490 NRBF2Q96F24 287 aa13.61□□□□□ -0.23
HMGCL-203ENST00000374490 ASIC4Q96FT7 647 aa13.61□□□□□ -0.23
HMGCL-203ENST00000374490 SCRN2Q96FV2 425 aa13.61□□□□□ -0.23
HMGCL-203ENST00000374490 MAGED4Q96JG8 741 aa13.61□□□□□ -0.23
HMGCL-203ENST00000374490 OR52E6Q96RD3 313 aa13.61□□□□□ -0.23
HMGCL-203ENST00000374490 HBEGFQ99075 208 aa13.61□□□□□ -0.23
HMGCL-203ENST00000374490 RBM4BQ9BQ04 359 aaKnown RBP13.61□□□□□ -0.23
HMGCL-203ENST00000374490 TCF25Q9BQ70 676 aa13.61□□□□□ -0.23
HMGCL-203ENST00000374490 RBM4Q9BWF3 364 aaKnown RBP13.61□□□□□ -0.23
HMGCL-203ENST00000374490 LIMD1Q9UGP4 676 aa13.61□□□□□ -0.23
HMGCL-203ENST00000374490 ADGRE2Q9UHX3 823 aa13.61□□□□□ -0.23
HMGCL-203ENST00000374490 V9GYQ6 96 aa13.61□□□□□ -0.23
HMGCL-203ENST00000374490 MYO9BQ13459 2157 aa13.6□□□□□ -0.23
HMGCL-203ENST00000374490 CHD7Q9P2D1 2997 aa13.6□□□□□ -0.23
HMGCL-203ENST00000374490 IGLV3-16A0A075B6K0 115 aa13.6□□□□□ -0.23
HMGCL-203ENST00000374490 A0A1B0GVG6 124 aa13.6□□□□□ -0.23
HMGCL-203ENST00000374490 LINC01553A4QN01 128 aa13.6□□□□□ -0.23
HMGCL-203ENST00000374490 G3V2T6 193 aa13.6□□□□□ -0.23
HMGCL-203ENST00000374490 TGM5O43548 720 aa13.6□□□□□ -0.23
HMGCL-203ENST00000374490 NUAK1O60285 661 aa13.6□□□□□ -0.23
HMGCL-203ENST00000374490 RECQL5O94762 991 aaPredicted RBP13.6□□□□□ -0.23
HMGCL-203ENST00000374490 HIST1H2AGP0C0S8 130 aaPredicted RBP13.6□□□□□ -0.23
HMGCL-203ENST00000374490 HIST1H2ADP20671 130 aa13.6□□□□□ -0.23
HMGCL-203ENST00000374490 CA5AP35218 305 aa13.6□□□□□ -0.23
HMGCL-203ENST00000374490 GABARAPL2P60520 117 aa13.6□□□□□ -0.23
HMGCL-203ENST00000374490 HMGCS1Q01581 520 aa13.6□□□□□ -0.23
HMGCL-203ENST00000374490 GRSF1Q12849 480 aaKnown RBP eCLIP13.6□□□□□ -0.23
HMGCL-203ENST00000374490 BOP1Q14137 746 aaKnown RBP13.6□□□□□ -0.23
HMGCL-203ENST00000374490 GBX1Q14549 363 aa13.6□□□□□ -0.23
HMGCL-203ENST00000374490 PTGR1Q14914 329 aa13.6□□□□□ -0.23
HMGCL-203ENST00000374490 RFX4Q33E94 735 aa13.6□□□□□ -0.23
HMGCL-203ENST00000374490 SPANXN4Q5MJ08 99 aa13.6□□□□□ -0.23
HMGCL-203ENST00000374490 OTUD3Q5T2D3 398 aaPredicted RBP13.6□□□□□ -0.23
HMGCL-203ENST00000374490 BROXQ5VW32 411 aa13.6□□□□□ -0.23
HMGCL-203ENST00000374490 TXNDC8Q6A555 127 aa13.6□□□□□ -0.23
HMGCL-203ENST00000374490 CRTC1Q6UUV9 634 aa13.6□□□□□ -0.23
HMGCL-203ENST00000374490 THAP5Q7Z6K1 395 aa13.6□□□□□ -0.23
HMGCL-203ENST00000374490 STK32CQ86UX6 486 aa13.6□□□□□ -0.23
HMGCL-203ENST00000374490 CALHM3Q86XJ0 350 aa13.6□□□□□ -0.23
HMGCL-203ENST00000374490 OFCC1Q8IZS5 231 aa13.6□□□□□ -0.23
HMGCL-203ENST00000374490 C8orf59Q8N0T1 100 aaPredicted RBP13.6□□□□□ -0.23
HMGCL-203ENST00000374490 CLDN19Q8N6F1 224 aa13.6□□□□□ -0.23
HMGCL-203ENST00000374490 OR10A6Q8NH74 314 aa13.6□□□□□ -0.23
HMGCL-203ENST00000374490 OR5K1Q8NHB7 308 aa13.6□□□□□ -0.23
HMGCL-203ENST00000374490 B4GALNT2Q8NHY0 566 aa13.6□□□□□ -0.23
HMGCL-203ENST00000374490 SLC22A17Q8WUG5 538 aa13.6□□□□□ -0.23
HMGCL-203ENST00000374490 HDAC2Q92769 488 aaKnown RBP13.6□□□□□ -0.23
HMGCL-203ENST00000374490 TESCQ96BS2 214 aa13.6□□□□□ -0.23
HMGCL-203ENST00000374490 C12orf43Q96C57 262 aaKnown RBP13.6□□□□□ -0.23
HMGCL-203ENST00000374490 ECHDC3Q96DC8 303 aa13.6□□□□□ -0.23
HMGCL-203ENST00000374490 CCDC97Q96F63 343 aaPredicted RBP13.6□□□□□ -0.23
HMGCL-203ENST00000374490 CMTM7Q96FZ5 175 aa13.6□□□□□ -0.23
HMGCL-203ENST00000374490 HIST1H2AHQ96KK5 128 aa13.6□□□□□ -0.23
HMGCL-203ENST00000374490 ZNF641Q96N77 438 aaPredicted RBP13.6□□□□□ -0.23
HMGCL-203ENST00000374490 MCCC1Q96RQ3 725 aaPredicted RBP13.6□□□□□ -0.23
HMGCL-203ENST00000374490 SLC22A12Q96S37 553 aa13.6□□□□□ -0.23
HMGCL-203ENST00000374490 HIST1H2AJQ99878 128 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms