RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 AGPAT4Q9NRZ5 378 aa11.79□□□□□ -0.52
HMGCL-202ENST00000374487 WNT6Q9Y6F9 365 aa11.79□□□□□ -0.52
HMGCL-202ENST00000374487 RNF103-CHMP3A0A140T963 221 aa11.79□□□□□ -0.52
HMGCL-202ENST00000374487 ENO4A6NNW6 628 aa11.79□□□□□ -0.52
HMGCL-202ENST00000374487 TTC34A8MYJ7 566 aa11.79□□□□□ -0.52
HMGCL-202ENST00000374487 WASH3PC4AMC7 463 aa11.79□□□□□ -0.52
HMGCL-202ENST00000374487 GMNNO75496 209 aa11.79□□□□□ -0.52
HMGCL-202ENST00000374487 RSL1D1O76021 490 aaKnown RBP11.79□□□□□ -0.52
HMGCL-202ENST00000374487 UMPSP11172 480 aa11.79□□□□□ -0.52
HMGCL-202ENST00000374487 HTR1EP28566 365 aa11.79□□□□□ -0.52
HMGCL-202ENST00000374487 VIPR1P32241 457 aa11.79□□□□□ -0.52
HMGCL-202ENST00000374487 HNMTP50135 292 aa11.79□□□□□ -0.52
HMGCL-202ENST00000374487 POLE2P56282 527 aa11.79□□□□□ -0.52
HMGCL-202ENST00000374487 MTPNP58546 118 aa11.79□□□□□ -0.52
HMGCL-202ENST00000374487 PWP1Q13610 501 aa11.79□□□□□ -0.52
HMGCL-202ENST00000374487 MAPKAPK3Q16644 382 aa11.79□□□□□ -0.52
HMGCL-202ENST00000374487 KRT80Q6KB66 452 aa11.79□□□□□ -0.52
HMGCL-202ENST00000374487 Q6ZVL8 140 aa11.79□□□□□ -0.52
HMGCL-202ENST00000374487 SIX5Q8N196 739 aa11.79□□□□□ -0.52
HMGCL-202ENST00000374487 LIX1Q8N485 282 aa11.79□□□□□ -0.52
HMGCL-202ENST00000374487 LEMD2Q8NC56 503 aa11.79□□□□□ -0.52
HMGCL-202ENST00000374487 MCOLN3Q8TDD5 553 aa11.79□□□□□ -0.52
HMGCL-202ENST00000374487 SLC13A3Q8WWT9 602 aa11.79□□□□□ -0.52
HMGCL-202ENST00000374487 ASB11Q8WXH4 323 aa11.79□□□□□ -0.52
HMGCL-202ENST00000374487 CENPNQ96H22 339 aaPredicted RBP11.79□□□□□ -0.52
HMGCL-202ENST00000374487 PRPF18Q99633 342 aaKnown RBP11.79□□□□□ -0.52
HMGCL-202ENST00000374487 CGREF1Q99674 301 aa11.79□□□□□ -0.52
HMGCL-202ENST00000374487 SLC29A3Q9BZD2 475 aa11.79□□□□□ -0.52
HMGCL-202ENST00000374487 ELOVL6Q9H5J4 265 aa11.79□□□□□ -0.52
HMGCL-202ENST00000374487 C1orf109Q9NX04 203 aa11.79□□□□□ -0.52
HMGCL-202ENST00000374487 MBD1Q9UIS9 605 aaPredicted RBP11.79□□□□□ -0.52
HMGCL-202ENST00000374487 ANAPC2Q9UJX6 822 aa11.79□□□□□ -0.52
HMGCL-202ENST00000374487 TMPRSS11EQ9UL52 423 aa11.79□□□□□ -0.52
HMGCL-202ENST00000374487 DUSP12Q9UNI6 340 aa11.79□□□□□ -0.52
HMGCL-202ENST00000374487 TMEM221A6NGB7 291 aa11.78□□□□□ -0.52
HMGCL-202ENST00000374487 M0R296 226 aa11.78□□□□□ -0.52
HMGCL-202ENST00000374487 SOCS2O14508 198 aa11.78□□□□□ -0.52
HMGCL-202ENST00000374487 NUAK1O60285 661 aa11.78□□□□□ -0.52
HMGCL-202ENST00000374487 CYP2A7P20853 494 aa11.78□□□□□ -0.52
HMGCL-202ENST00000374487 GDI1P31150 447 aa11.78□□□□□ -0.52
HMGCL-202ENST00000374487 GGT5P36269 586 aa11.78□□□□□ -0.52
HMGCL-202ENST00000374487 GRIA2P42262 883 aa11.78□□□□□ -0.52
HMGCL-202ENST00000374487 SOX9P48436 509 aa11.78□□□□□ -0.52
HMGCL-202ENST00000374487 MYBPC1Q00872 1141 aa11.78□□□□□ -0.52
HMGCL-202ENST00000374487 PLOD1Q02809 727 aaPredicted RBP11.78□□□□□ -0.52
HMGCL-202ENST00000374487 FAM174BQ3ZCQ3 159 aa11.78□□□□□ -0.52
HMGCL-202ENST00000374487 PLEKHS1Q5SXH7 462 aa11.78□□□□□ -0.52
HMGCL-202ENST00000374487 TMEM215Q68D42 235 aa11.78□□□□□ -0.52
HMGCL-202ENST00000374487 RNF165Q6ZSG1 346 aa11.78□□□□□ -0.52
HMGCL-202ENST00000374487 LRRC70Q7Z2Q7 622 aa11.78□□□□□ -0.52
HMGCL-202ENST00000374487 HSD11B1LQ7Z5J1 315 aa11.78□□□□□ -0.52
HMGCL-202ENST00000374487 CBR4Q8N4T8 237 aa11.78□□□□□ -0.52
HMGCL-202ENST00000374487 GLB1L3Q8NCI6 653 aaPredicted RBP11.78□□□□□ -0.52
HMGCL-202ENST00000374487 SELENOMQ8WWX9 145 aa11.78□□□□□ -0.52
HMGCL-202ENST00000374487 ELMO1Q92556 727 aa11.78□□□□□ -0.52
HMGCL-202ENST00000374487 LRFN3Q9BTN0 628 aa11.78□□□□□ -0.52
HMGCL-202ENST00000374487 MAGEL2Q9UJ55 1249 aa11.78□□□□□ -0.52
HMGCL-202ENST00000374487 SNX6Q9UNH7 406 aa11.78□□□□□ -0.52
HMGCL-202ENST00000374487 OTOL1A6NHN0 477 aaPredicted RBP11.78□□□□□ -0.52
HMGCL-202ENST00000374487 PI15O43692 258 aa11.78□□□□□ -0.52
HMGCL-202ENST00000374487 IL6P05231 212 aa11.78□□□□□ -0.52
HMGCL-202ENST00000374487 ATP6V1B1P15313 513 aa11.78□□□□□ -0.52
HMGCL-202ENST00000374487 ETV3P41162 512 aa11.78□□□□□ -0.52
HMGCL-202ENST00000374487 RPL5P46777 297 aaKnown RBP11.78□□□□□ -0.52
HMGCL-202ENST00000374487 CLCN2P51788 898 aa11.78□□□□□ -0.52
HMGCL-202ENST00000374487 ZNF77Q15935 545 aa11.78□□□□□ -0.52
HMGCL-202ENST00000374487 PTCHD3Q3KNS1 767 aa11.78□□□□□ -0.52
HMGCL-202ENST00000374487 INTS11Q5TA45 600 aaKnown RBP11.78□□□□□ -0.52
HMGCL-202ENST00000374487 GLYATQ6IB77 296 aa11.78□□□□□ -0.52
HMGCL-202ENST00000374487 SERPINA13PQ6UXR4 307 aa11.78□□□□□ -0.52
HMGCL-202ENST00000374487 SATL1Q86VE3 508 aa11.78□□□□□ -0.52
HMGCL-202ENST00000374487 VRK3Q8IV63 474 aa11.78□□□□□ -0.52
HMGCL-202ENST00000374487 TBC1D21Q8IYX1 336 aa11.78□□□□□ -0.52
HMGCL-202ENST00000374487 PACRGLQ8N7B6 248 aa11.78□□□□□ -0.52
HMGCL-202ENST00000374487 FRS2Q8WU20 508 aa11.78□□□□□ -0.52
HMGCL-202ENST00000374487 ASZ1Q8WWH4 475 aa11.78□□□□□ -0.52
HMGCL-202ENST00000374487 USP7Q93009 1102 aa11.78□□□□□ -0.52
HMGCL-202ENST00000374487 ELSPBP1Q96BH3 223 aa11.78□□□□□ -0.52
HMGCL-202ENST00000374487 PYCR2Q96C36 320 aa11.78□□□□□ -0.52
HMGCL-202ENST00000374487 OTUB2Q96DC9 234 aa11.78□□□□□ -0.52
HMGCL-202ENST00000374487 NSMCE2Q96MF7 247 aa11.78□□□□□ -0.52
HMGCL-202ENST00000374487 SEPHS2Q99611 448 aa11.78□□□□□ -0.52
HMGCL-202ENST00000374487 C9orf16Q9BUW7 83 aa11.78□□□□□ -0.52
HMGCL-202ENST00000374487 THUMPD3Q9BV44 507 aaKnown RBP11.78□□□□□ -0.52
HMGCL-202ENST00000374487 MRPS26Q9BYN8 205 aaKnown RBP11.78□□□□□ -0.52
HMGCL-202ENST00000374487 SLC2A11Q9BYW1 496 aa11.78□□□□□ -0.52
HMGCL-202ENST00000374487 ZNF696Q9H7X3 374 aa11.78□□□□□ -0.52
HMGCL-202ENST00000374487 PCDH12Q9NPG4 1184 aa11.78□□□□□ -0.52
HMGCL-202ENST00000374487 FAM8A1Q9UBU6 413 aa11.78□□□□□ -0.52
HMGCL-202ENST00000374487 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.78□□□□□ -0.52
HMGCL-202ENST00000374487 USP22Q9UPT9 525 aa11.78□□□□□ -0.52
HMGCL-202ENST00000374487 PCDHB3Q9Y5E6 796 aa11.78□□□□□ -0.52
HMGCL-202ENST00000374487 SHISA7A6NL88 538 aa11.77□□□□□ -0.53
HMGCL-202ENST00000374487 OR2AG2A6NM03 316 aa11.77□□□□□ -0.53
HMGCL-202ENST00000374487 UPK3BL1B0FP48 263 aa11.77□□□□□ -0.53
HMGCL-202ENST00000374487 UPK3BL2E5RIL1 263 aa11.77□□□□□ -0.53
HMGCL-202ENST00000374487 PDLIM1O00151 329 aa11.77□□□□□ -0.53
HMGCL-202ENST00000374487 SLC9A3R1O14745 358 aaPredicted RBP11.77□□□□□ -0.53
HMGCL-202ENST00000374487 PDYNP01213 254 aa11.77□□□□□ -0.53
HMGCL-202ENST00000374487 FTH1P02794 183 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms