RNA–Protein interactions for RNA: ENST00000372733.3

SDC4-201, Transcript of syndecan 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC4, Length 2,613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4-201ENST00000372733 ZNF551Q7Z340 670 aaPredicted RBP16■□□□□ 0.15
SDC4-201ENST00000372733 SCAIQ8N9R8 606 aa16■□□□□ 0.15
SDC4-201ENST00000372733 YIPF2Q9BWQ6 316 aa16■□□□□ 0.15
SDC4-201ENST00000372733 H3BNC9 293 aa16■□□□□ 0.15
SDC4-201ENST00000372733 hCG_2039718K7EN88 272 aa16■□□□□ 0.15
SDC4-201ENST00000372733 SLC28A1O00337 649 aa16■□□□□ 0.15
SDC4-201ENST00000372733 FAM20BO75063 409 aa16■□□□□ 0.15
SDC4-201ENST00000372733 GLUD1P00367 558 aa16■□□□□ 0.15
SDC4-201ENST00000372733 F11P03951 625 aa16■□□□□ 0.15
SDC4-201ENST00000372733 KRT20P35900 424 aa16■□□□□ 0.15
SDC4-201ENST00000372733 TPTEP56180 551 aa16■□□□□ 0.15
SDC4-201ENST00000372733 SLC13A2Q13183 592 aa16■□□□□ 0.15
SDC4-201ENST00000372733 KCNJ8Q15842 424 aa16■□□□□ 0.15
SDC4-201ENST00000372733 USP39Q53GS9 565 aaKnown RBP16■□□□□ 0.15
SDC4-201ENST00000372733 CCDC92Q53HC0 331 aaPredicted RBP16■□□□□ 0.15
SDC4-201ENST00000372733 UBE2FQ969M7 185 aa16■□□□□ 0.15
SDC4-201ENST00000372733 PDLIM5Q96HC4 596 aaKnown RBP16■□□□□ 0.15
SDC4-201ENST00000372733 DSN1Q9H410 356 aa16■□□□□ 0.15
SDC4-201ENST00000372733 ACOT13Q9NPJ3 140 aa16■□□□□ 0.15
SDC4-201ENST00000372733 RASSF1Q9NS23 344 aa16■□□□□ 0.15
SDC4-201ENST00000372733 SCN3BQ9NY72 215 aa16■□□□□ 0.15
SDC4-201ENST00000372733 CHD5Q8TDI0 1954 aa16■□□□□ 0.15
SDC4-201ENST00000372733 A8MU76 341 aa15.99■□□□□ 0.15
SDC4-201ENST00000372733 MANBAO00462 879 aa15.99■□□□□ 0.15
SDC4-201ENST00000372733 PER2O15055 1255 aa15.99■□□□□ 0.15
SDC4-201ENST00000372733 RGS10O43665 173 aa15.99■□□□□ 0.15
SDC4-201ENST00000372733 KDELR3O43731 214 aa15.99■□□□□ 0.15
SDC4-201ENST00000372733 MYO1DO94832 1006 aa15.99■□□□□ 0.15
SDC4-201ENST00000372733 OXSR1O95747 527 aaPredicted RBP15.99■□□□□ 0.15
SDC4-201ENST00000372733 PABPC1P11940 636 aaKnown RBP15.99■□□□□ 0.15
SDC4-201ENST00000372733 MAGEA2P43356 314 aa15.99■□□□□ 0.15
SDC4-201ENST00000372733 IRF5Q13568 498 aa15.99■□□□□ 0.15
SDC4-201ENST00000372733 CARTPTQ16568 116 aa15.99■□□□□ 0.15
SDC4-201ENST00000372733 CTXN3Q4LDR2 81 aa15.99■□□□□ 0.15
SDC4-201ENST00000372733 CLDN19Q8N6F1 224 aa15.99■□□□□ 0.15
SDC4-201ENST00000372733 EID2BQ96D98 161 aa15.99■□□□□ 0.15
SDC4-201ENST00000372733 DACH2Q96NX9 599 aa15.99■□□□□ 0.15
SDC4-201ENST00000372733 PRDM8Q9NQV8 689 aa15.99■□□□□ 0.15
SDC4-201ENST00000372733 VPS51Q9UID3 782 aa15.99■□□□□ 0.15
SDC4-201ENST00000372733 SLCO3A1Q9UIG8 710 aa15.99■□□□□ 0.15
SDC4-201ENST00000372733 TMED5Q9Y3A6 229 aa15.99■□□□□ 0.15
SDC4-201ENST00000372733 Q9Y3F1 56 aa15.99■□□□□ 0.15
SDC4-201ENST00000372733 LOC730098B7Z3J9 87 aa15.99■□□□□ 0.15
SDC4-201ENST00000372733 BMP1P13497 986 aa15.99■□□□□ 0.15
SDC4-201ENST00000372733 CTPS1P17812 591 aa15.99■□□□□ 0.15
SDC4-201ENST00000372733 PAX3P23760 479 aa15.99■□□□□ 0.15
SDC4-201ENST00000372733 TGFBR2P37173 567 aa15.99■□□□□ 0.15
SDC4-201ENST00000372733 TWF1Q12792 350 aa15.99■□□□□ 0.15
SDC4-201ENST00000372733 SELENBP1Q13228 472 aa15.99■□□□□ 0.15
SDC4-201ENST00000372733 FAM151BQ6UXP7 276 aa15.99■□□□□ 0.15
SDC4-201ENST00000372733 PLD3Q8IV08 490 aa15.99■□□□□ 0.15
SDC4-201ENST00000372733 HTRA1Q92743 480 aa15.99■□□□□ 0.15
SDC4-201ENST00000372733 ULK4Q96C45 1275 aa15.99■□□□□ 0.15
SDC4-201ENST00000372733 TSSK3Q96PN8 268 aa15.99■□□□□ 0.15
SDC4-201ENST00000372733 ADGRE3Q9BY15 652 aa15.99■□□□□ 0.15
SDC4-201ENST00000372733 GABARAPL1Q9H0R8 117 aa15.99■□□□□ 0.15
SDC4-201ENST00000372733 ABCB10Q9NRK6 738 aa15.99■□□□□ 0.15
SDC4-201ENST00000372733 PLXNA4Q9HCM2 1894 aa15.99■□□□□ 0.15
SDC4-201ENST00000372733 SCN10AQ9Y5Y9 1956 aa15.99■□□□□ 0.15
SDC4-201ENST00000372733 H0Y626 953 aa15.98■□□□□ 0.15
SDC4-201ENST00000372733 ACSL4O60488 711 aa15.98■□□□□ 0.15
SDC4-201ENST00000372733 ERN1O75460 977 aaKnown RBP15.98■□□□□ 0.15
SDC4-201ENST00000372733 TRIM16O95361 564 aa15.98■□□□□ 0.15
SDC4-201ENST00000372733 CD36P16671 472 aa15.98■□□□□ 0.15
SDC4-201ENST00000372733 PTPN6P29350 595 aa15.98■□□□□ 0.15
SDC4-201ENST00000372733 GRK3P35626 688 aa15.98■□□□□ 0.15
SDC4-201ENST00000372733 EIF2DP41214 584 aaKnown RBP15.98■□□□□ 0.15
SDC4-201ENST00000372733 KEAP1Q14145 624 aa15.98■□□□□ 0.15
SDC4-201ENST00000372733 MAD2L1BPQ15013 274 aaPredicted RBP15.98■□□□□ 0.15
SDC4-201ENST00000372733 BCL2A1Q16548 175 aa15.98■□□□□ 0.15
SDC4-201ENST00000372733 KDM4DQ6B0I6 523 aa15.98■□□□□ 0.15
SDC4-201ENST00000372733 OR2T5Q6IEZ7 315 aa15.98■□□□□ 0.15
SDC4-201ENST00000372733 AHSA2Q719I0 299 aa15.98■□□□□ 0.15
SDC4-201ENST00000372733 ZNF598Q86UK7 904 aaKnown RBP15.98■□□□□ 0.15
SDC4-201ENST00000372733 CCDC71Q8IV32 467 aaPredicted RBP15.98■□□□□ 0.15
SDC4-201ENST00000372733 STK40Q8N2I9 435 aa15.98■□□□□ 0.15
SDC4-201ENST00000372733 TTC29Q8NA56 475 aaPredicted RBP15.98■□□□□ 0.15
SDC4-201ENST00000372733 OR2T29Q8NH02 315 aa15.98■□□□□ 0.15
SDC4-201ENST00000372733 LGALS12Q96DT0 336 aa15.98■□□□□ 0.15
SDC4-201ENST00000372733 FAM126AQ9BYI3 521 aaPredicted RBP15.98■□□□□ 0.15
SDC4-201ENST00000372733 CD244Q9BZW8 370 aa15.98■□□□□ 0.15
SDC4-201ENST00000372733 CLPBQ9H078 707 aa15.98■□□□□ 0.15
SDC4-201ENST00000372733 ABCG8Q9H221 673 aa15.98■□□□□ 0.15
SDC4-201ENST00000372733 GPRC5BQ9NZH0 403 aa15.98■□□□□ 0.15
SDC4-201ENST00000372733 ANKMY1Q9P2S6 941 aa15.98■□□□□ 0.15
SDC4-201ENST00000372733 ITGB1BP2Q9UKP3 347 aa15.98■□□□□ 0.15
SDC4-201ENST00000372733 OARD1Q9Y530 152 aa15.98■□□□□ 0.15
SDC4-201ENST00000372733 PRSS21Q9Y6M0 314 aa15.98■□□□□ 0.15
SDC4-201ENST00000372733 A0A096LPI6 279 aa15.98■□□□□ 0.15
SDC4-201ENST00000372733 H7C0S8 307 aa15.98■□□□□ 0.15
SDC4-201ENST00000372733 LRATO95237 230 aa15.98■□□□□ 0.15
SDC4-201ENST00000372733 RHOCP08134 193 aa15.98■□□□□ 0.15
SDC4-201ENST00000372733 HOXA9P31269 272 aa15.98■□□□□ 0.15
SDC4-201ENST00000372733 S100A3P33764 101 aa15.98■□□□□ 0.15
SDC4-201ENST00000372733 MAGEA11P43364 429 aa15.98■□□□□ 0.15
SDC4-201ENST00000372733 RPS14P62263 151 aaKnown RBP15.98■□□□□ 0.15
SDC4-201ENST00000372733 CACNG1Q06432 222 aa15.98■□□□□ 0.15
SDC4-201ENST00000372733 LRIF1Q5T3J3 769 aa15.98■□□□□ 0.15
SDC4-201ENST00000372733 TRIM46Q7Z4K8 759 aa15.98■□□□□ 0.15
SDC4-201ENST00000372733 SNX20Q7Z614 316 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms