RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 ZACNQ401N2 412 aa14.98□□□□□ -0.01
COL5A1-201ENST00000371817 LIX1Q8N485 282 aa14.98□□□□□ -0.01
COL5A1-201ENST00000371817 COL21A1Q96P44 957 aa14.98□□□□□ -0.01
COL5A1-201ENST00000371817 SNRNP25Q9BV90 132 aaKnown RBP14.98□□□□□ -0.01
COL5A1-201ENST00000371817 MYNNQ9NPC7 610 aa14.98□□□□□ -0.01
COL5A1-201ENST00000371817 A0A0J9YVX5 310 aa14.98□□□□□ -0.01
COL5A1-201ENST00000371817 TEX13CA0A0J9YWL9 993 aa14.98□□□□□ -0.01
COL5A1-201ENST00000371817 CASTOR2A6NHX0 329 aa14.98□□□□□ -0.01
COL5A1-201ENST00000371817 OAZ2O95190 189 aa14.98□□□□□ -0.01
COL5A1-201ENST00000371817 GTF2H2Q13888 395 aa14.98□□□□□ -0.01
COL5A1-201ENST00000371817 GTF2H2CQ6P1K8 395 aa14.98□□□□□ -0.01
COL5A1-201ENST00000371817 LRRC58Q96CX6 371 aa14.98□□□□□ -0.01
COL5A1-201ENST00000371817 HIST1H2AAQ96QV6 131 aa14.98□□□□□ -0.01
COL5A1-201ENST00000371817 CDT1Q9H211 546 aa14.98□□□□□ -0.01
COL5A1-201ENST00000371817 PAK1IP1Q9NWT1 392 aaPredicted RBP14.98□□□□□ -0.01
COL5A1-201ENST00000371817 NPHS1O60500 1241 aa14.98□□□□□ -0.01
COL5A1-201ENST00000371817 PRKXP51817 358 aa14.98□□□□□ -0.01
COL5A1-201ENST00000371817 AFF3P51826 1226 aaKnown RBP14.98□□□□□ -0.01
COL5A1-201ENST00000371817 KANK2Q63ZY3 851 aa14.98□□□□□ -0.01
COL5A1-201ENST00000371817 SLC43A3Q8NBI5 491 aa14.98□□□□□ -0.01
COL5A1-201ENST00000371817 OR10G2Q8NGC3 310 aa14.98□□□□□ -0.01
COL5A1-201ENST00000371817 GTF3C2Q8WUA4 911 aaPredicted RBP14.98□□□□□ -0.01
COL5A1-201ENST00000371817 OTUB2Q96DC9 234 aa14.98□□□□□ -0.01
COL5A1-201ENST00000371817 IL4I1Q96RQ9 567 aa14.98□□□□□ -0.01
COL5A1-201ENST00000371817 ZNF132P52740 706 aa14.98□□□□□ -0.01
COL5A1-201ENST00000371817 NOL9Q5SY16 702 aaKnown RBP14.98□□□□□ -0.01
COL5A1-201ENST00000371817 FAM183BPQ6ZVS7 135 aa14.98□□□□□ -0.01
COL5A1-201ENST00000371817 DDX1Q92499 740 aaKnown RBP14.98□□□□□ -0.01
COL5A1-201ENST00000371817 CPNE2Q96FN4 548 aaPredicted RBP14.98□□□□□ -0.01
COL5A1-201ENST00000371817 PCDHGB5Q9Y5G0 923 aa14.98□□□□□ -0.01
COL5A1-201ENST00000371817 ASXL3Q9C0F0 2248 aa14.98□□□□□ -0.01
COL5A1-201ENST00000371817 PTTG1O95997 202 aa14.98□□□□□ -0.01
COL5A1-201ENST00000371817 H2AFB2P0C5Z0 115 aa14.98□□□□□ -0.01
COL5A1-201ENST00000371817 GALEQ14376 348 aa14.98□□□□□ -0.01
COL5A1-201ENST00000371817 ELP2Q6IA86 826 aa14.98□□□□□ -0.01
COL5A1-201ENST00000371817 UBE2R2Q712K3 238 aaPredicted RBP14.98□□□□□ -0.01
COL5A1-201ENST00000371817 MTMR9Q96QG7 549 aa14.98□□□□□ -0.01
COL5A1-201ENST00000371817 H7C417 338 aa14.98□□□□□ -0.01
COL5A1-201ENST00000371817 RENP00797 406 aa14.98□□□□□ -0.01
COL5A1-201ENST00000371817 IL7RP16871 459 aa14.98□□□□□ -0.01
COL5A1-201ENST00000371817 THPOP40225 353 aa14.98□□□□□ -0.01
COL5A1-201ENST00000371817 CLCN3P51790 818 aa14.98□□□□□ -0.01
COL5A1-201ENST00000371817 KIAA1161Q6NSJ0 714 aa14.98□□□□□ -0.01
COL5A1-201ENST00000371817 ANKRD54Q6NXT1 300 aa14.98□□□□□ -0.01
COL5A1-201ENST00000371817 SCML4Q8N228 414 aa14.98□□□□□ -0.01
COL5A1-201ENST00000371817 OR2M4Q96R27 311 aa14.98□□□□□ -0.01
COL5A1-201ENST00000371817 GLI2P10070 1586 aa14.98□□□□□ -0.01
COL5A1-201ENST00000371817 GRID2O43424 1007 aa14.98□□□□□ -0.01
COL5A1-201ENST00000371817 HNRNPA0Q13151 305 aaKnown RBP14.98□□□□□ -0.01
COL5A1-201ENST00000371817 TPT1P8Q9HAU6 139 aa14.98□□□□□ -0.01
COL5A1-201ENST00000371817 TNFSF13BQ9Y275 285 aa14.98□□□□□ -0.01
COL5A1-201ENST00000371817 RGS9O75916 674 aaPredicted RBP14.97□□□□□ -0.01
COL5A1-201ENST00000371817 RPLP2P05387 115 aaKnown RBP14.97□□□□□ -0.01
COL5A1-201ENST00000371817 SFTPBP07988 381 aa14.97□□□□□ -0.01
COL5A1-201ENST00000371817 GMPSP49915 693 aaPredicted RBP14.97□□□□□ -0.01
COL5A1-201ENST00000371817 C2orf76Q3KRA6 126 aa14.97□□□□□ -0.01
COL5A1-201ENST00000371817 HECTD2Q5U5R9 776 aa14.97□□□□□ -0.01
COL5A1-201ENST00000371817 OR2T5Q6IEZ7 315 aa14.97□□□□□ -0.01
COL5A1-201ENST00000371817 OR2T29Q8NH02 315 aa14.97□□□□□ -0.01
COL5A1-201ENST00000371817 YARS2Q9Y2Z4 477 aaKnown RBP14.97□□□□□ -0.01
COL5A1-201ENST00000371817 TIMM22Q9Y584 194 aa14.97□□□□□ -0.01
COL5A1-201ENST00000371817 EDNRAP25101 427 aa14.97□□□□□ -0.01
COL5A1-201ENST00000371817 HES5Q5TA89 166 aa14.97□□□□□ -0.01
COL5A1-201ENST00000371817 C1orf94Q6P1W5 598 aa14.97□□□□□ -0.01
COL5A1-201ENST00000371817 LGMNQ99538 433 aa14.97□□□□□ -0.01
COL5A1-201ENST00000371817 SEMA3CQ99985 751 aa14.97□□□□□ -0.01
COL5A1-201ENST00000371817 ENY2Q9NPA8 101 aa14.97□□□□□ -0.01
COL5A1-201ENST00000371817 MIOSQ9NXC5 875 aa14.97□□□□□ -0.01
COL5A1-201ENST00000371817 FETUBQ9UGM5 382 aa14.97□□□□□ -0.01
COL5A1-201ENST00000371817 E2F3O00716 465 aa14.97□□□□□ -0.01
COL5A1-201ENST00000371817 ZNF460Q14592 562 aa14.97□□□□□ -0.01
COL5A1-201ENST00000371817 ALG1LQ6GMV1 187 aa14.97□□□□□ -0.01
COL5A1-201ENST00000371817 CADM2Q8N3J6 435 aa14.97□□□□□ -0.01
COL5A1-201ENST00000371817 SHKBP1Q8TBC3 707 aa14.97□□□□□ -0.01
COL5A1-201ENST00000371817 COQ10AQ96MF6 247 aa14.97□□□□□ -0.01
COL5A1-201ENST00000371817 RTFDC1Q9BY42 306 aaPredicted RBP14.97□□□□□ -0.01
COL5A1-201ENST00000371817 ASB7Q9H672 318 aa14.97□□□□□ -0.01
COL5A1-201ENST00000371817 PNO1Q9NRX1 252 aaKnown RBP14.97□□□□□ -0.01
COL5A1-201ENST00000371817 MARCH2Q9P0N8 246 aa14.97□□□□□ -0.01
COL5A1-201ENST00000371817 SHROOM3Q8TF72 1996 aa14.97□□□□□ -0.01
COL5A1-201ENST00000371817 MYCLP1P12525 358 aaPredicted RBP14.97□□□□□ -0.01
COL5A1-201ENST00000371817 SNTA1Q13424 505 aa14.97□□□□□ -0.01
COL5A1-201ENST00000371817 PPM1JQ5JR12 505 aa14.97□□□□□ -0.01
COL5A1-201ENST00000371817 GALNT7Q86SF2 657 aa14.97□□□□□ -0.01
COL5A1-201ENST00000371817 TMEM80Q96HE8 168 aa14.97□□□□□ -0.01
COL5A1-201ENST00000371817 HSFY1Q96LI6 401 aa14.97□□□□□ -0.01
COL5A1-201ENST00000371817 PRICKLE1Q96MT3 831 aaPredicted RBP14.97□□□□□ -0.01
COL5A1-201ENST00000371817 CNTNAP3BQ96NU0 1288 aa14.97□□□□□ -0.01
COL5A1-201ENST00000371817 MTIF3Q9H2K0 278 aaKnown RBP14.97□□□□□ -0.01
COL5A1-201ENST00000371817 RPS10P5Q9NQ39 176 aa14.97□□□□□ -0.01
COL5A1-201ENST00000371817 CA5BQ9Y2D0 317 aa14.97□□□□□ -0.01
COL5A1-201ENST00000371817 UGGT1Q9NYU2 1555 aa14.97□□□□□ -0.01
COL5A1-201ENST00000371817 CES1P23141 567 aa14.97□□□□□ -0.01
COL5A1-201ENST00000371817 METTL3Q86U44 580 aaKnown RBP14.97□□□□□ -0.01
COL5A1-201ENST00000371817 C7orf61Q8IZ16 206 aa14.97□□□□□ -0.01
COL5A1-201ENST00000371817 GEMIN6Q8WXD5 167 aaKnown RBP14.97□□□□□ -0.01
COL5A1-201ENST00000371817 AGO4Q9HCK5 861 aaKnown RBP14.97□□□□□ -0.01
COL5A1-201ENST00000371817 GNG8Q9UK08 70 aa14.97□□□□□ -0.01
COL5A1-201ENST00000371817 HEATR1Q9H583 2144 aaKnown RBP14.97□□□□□ -0.01
COL5A1-201ENST00000371817 FSCN2O14926 492 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms