RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 LIPJQ5W064 366 aa13.67□□□□□ -0.22
USF1-202ENST00000368020 FAM219BQ5XKK7 198 aa13.67□□□□□ -0.22
USF1-202ENST00000368020 TMEM215Q68D42 235 aa13.67□□□□□ -0.22
USF1-202ENST00000368020 DLEU7Q6UYE1 221 aa13.67□□□□□ -0.22
USF1-202ENST00000368020 EP400NLQ6ZTU2 488 aa13.67□□□□□ -0.22
USF1-202ENST00000368020 Q7L0L9 218 aa13.67□□□□□ -0.22
USF1-202ENST00000368020 HSD11B1LQ7Z5J1 315 aa13.67□□□□□ -0.22
USF1-202ENST00000368020 RASGRP3Q8IV61 690 aa13.67□□□□□ -0.22
USF1-202ENST00000368020 ADGRG5Q8IZF4 528 aa13.67□□□□□ -0.22
USF1-202ENST00000368020 RGL4Q8IZJ4 473 aa13.67□□□□□ -0.22
USF1-202ENST00000368020 MFSD2AQ8NA29 543 aa13.67□□□□□ -0.22
USF1-202ENST00000368020 CSGALNACT1Q8TDX6 532 aa13.67□□□□□ -0.22
USF1-202ENST00000368020 BTN2A2Q8WVV5 523 aa13.67□□□□□ -0.22
USF1-202ENST00000368020 TMEM159Q96B96 161 aa13.67□□□□□ -0.22
USF1-202ENST00000368020 CMTM7Q96FZ5 175 aa13.67□□□□□ -0.22
USF1-202ENST00000368020 NSMCE2Q96MF7 247 aa13.67□□□□□ -0.22
USF1-202ENST00000368020 FOPNLQ96NB1 174 aa13.67□□□□□ -0.22
USF1-202ENST00000368020 GUCD1Q96NT3 240 aa13.67□□□□□ -0.22
USF1-202ENST00000368020 MRPS26Q9BYN8 205 aaKnown RBP13.67□□□□□ -0.22
USF1-202ENST00000368020 EPB41L1Q9H4G0 881 aa13.67□□□□□ -0.22
USF1-202ENST00000368020 RMND5AQ9H871 391 aa13.67□□□□□ -0.22
USF1-202ENST00000368020 COQ10BQ9H8M1 238 aa13.67□□□□□ -0.22
USF1-202ENST00000368020 EGFL7Q9UHF1 273 aa13.67□□□□□ -0.22
USF1-202ENST00000368020 TMPRSS11EQ9UL52 423 aa13.67□□□□□ -0.22
USF1-202ENST00000368020 MAPRE3Q9UPY8 281 aa13.67□□□□□ -0.22
USF1-202ENST00000368020 DENND4AQ7Z401 1863 aa13.66□□□□□ -0.22
USF1-202ENST00000368020 C16orf96A6NNT2 1141 aa13.66□□□□□ -0.22
USF1-202ENST00000368020 INPP4BO15327 924 aa13.66□□□□□ -0.22
USF1-202ENST00000368020 TIPRLO75663 272 aa13.66□□□□□ -0.22
USF1-202ENST00000368020 NFATC1O95644 943 aa13.66□□□□□ -0.22
USF1-202ENST00000368020 CATP04040 527 aaKnown RBP13.66□□□□□ -0.22
USF1-202ENST00000368020 FOSL2P15408 326 aa13.66□□□□□ -0.22
USF1-202ENST00000368020 PRLHRP49683 370 aa13.66□□□□□ -0.22
USF1-202ENST00000368020 ELP6Q0PNE2 266 aa13.66□□□□□ -0.22
USF1-202ENST00000368020 EIF4HQ15056 248 aaKnown RBP13.66□□□□□ -0.22
USF1-202ENST00000368020 DPY19L1Q2PZI1 675 aa13.66□□□□□ -0.22
USF1-202ENST00000368020 SLC2A7Q6PXP3 512 aa13.66□□□□□ -0.22
USF1-202ENST00000368020 Q6ZVL8 140 aa13.66□□□□□ -0.22
USF1-202ENST00000368020 CYP2U1Q7Z449 544 aa13.66□□□□□ -0.22
USF1-202ENST00000368020 TECPR1Q7Z6L1 1165 aa13.66□□□□□ -0.22
USF1-202ENST00000368020 KLHDC8AQ8IYD2 350 aa13.66□□□□□ -0.22
USF1-202ENST00000368020 LIX1Q8N485 282 aa13.66□□□□□ -0.22
USF1-202ENST00000368020 SELENOMQ8WWX9 145 aa13.66□□□□□ -0.22
USF1-202ENST00000368020 STARD8Q92502 1023 aa13.66□□□□□ -0.22
USF1-202ENST00000368020 GLYATL1Q969I3 302 aa13.66□□□□□ -0.22
USF1-202ENST00000368020 CNBD2Q96M20 576 aa13.66□□□□□ -0.22
USF1-202ENST00000368020 SEMA6AQ9H2E6 1030 aa13.66□□□□□ -0.22
USF1-202ENST00000368020 INTS7Q9NVH2 962 aaKnown RBP13.66□□□□□ -0.22
USF1-202ENST00000368020 CD84Q9UIB8 345 aa13.66□□□□□ -0.22
USF1-202ENST00000368020 TCRBV5S2A0A599 114 aa13.65□□□□□ -0.22
USF1-202ENST00000368020 WNT9AO14904 365 aa13.65□□□□□ -0.22
USF1-202ENST00000368020 PRMT3O60678 531 aa13.65□□□□□ -0.22
USF1-202ENST00000368020 ERN1O75460 977 aaKnown RBP13.65□□□□□ -0.22
USF1-202ENST00000368020 PSIP1O75475 530 aaKnown RBP13.65□□□□□ -0.22
USF1-202ENST00000368020 CYP17A1P05093 508 aa13.65□□□□□ -0.22
USF1-202ENST00000368020 PGRP06401 933 aa13.65□□□□□ -0.22
USF1-202ENST00000368020 CISD3P0C7P0 127 aa13.65□□□□□ -0.22
USF1-202ENST00000368020 BMP1P13497 986 aa13.65□□□□□ -0.22
USF1-202ENST00000368020 HSD3B1P14060 373 aa13.65□□□□□ -0.22
USF1-202ENST00000368020 HSD3B2P26439 372 aa13.65□□□□□ -0.22
USF1-202ENST00000368020 CLDN8P56748 225 aa13.65□□□□□ -0.22
USF1-202ENST00000368020 SEMG2Q02383 582 aa13.65□□□□□ -0.22
USF1-202ENST00000368020 PCDH1Q08174 1060 aa13.65□□□□□ -0.22
USF1-202ENST00000368020 CSTF3Q12996 717 aaKnown RBP13.65□□□□□ -0.22
USF1-202ENST00000368020 KIAA0040Q15053 153 aa13.65□□□□□ -0.22
USF1-202ENST00000368020 PTCHD3Q3KNS1 767 aa13.65□□□□□ -0.22
USF1-202ENST00000368020 LIN52Q52LA3 116 aa13.65□□□□□ -0.22
USF1-202ENST00000368020 FAM78AQ5JUQ0 283 aa13.65□□□□□ -0.22
USF1-202ENST00000368020 C10orf62Q5T681 223 aaPredicted RBP13.65□□□□□ -0.22
USF1-202ENST00000368020 HMBOX1Q6NT76 420 aa13.65□□□□□ -0.22
USF1-202ENST00000368020 ZNF765Q7L2R6 523 aa13.65□□□□□ -0.22
USF1-202ENST00000368020 GET4Q7L5D6 327 aaPredicted RBP13.65□□□□□ -0.22
USF1-202ENST00000368020 DET1Q7L5Y6 550 aa13.65□□□□□ -0.22
USF1-202ENST00000368020 IFNEQ86WN2 208 aa13.65□□□□□ -0.22
USF1-202ENST00000368020 TMIEQ8NEW7 156 aa13.65□□□□□ -0.22
USF1-202ENST00000368020 OR52E4Q8NGH9 312 aa13.65□□□□□ -0.22
USF1-202ENST00000368020 CYB5D2Q8WUJ1 264 aa13.65□□□□□ -0.22
USF1-202ENST00000368020 TESCQ96BS2 214 aa13.65□□□□□ -0.22
USF1-202ENST00000368020 PPP1R16AQ96I34 528 aa13.65□□□□□ -0.22
USF1-202ENST00000368020 CCDC138Q96M89 665 aa13.65□□□□□ -0.22
USF1-202ENST00000368020 HBEGFQ99075 208 aa13.65□□□□□ -0.22
USF1-202ENST00000368020 TSC22D3Q99576 134 aa13.65□□□□□ -0.22
USF1-202ENST00000368020 CIB1Q99828 191 aa13.65□□□□□ -0.22
USF1-202ENST00000368020 BDH2Q9BUT1 245 aa13.65□□□□□ -0.22
USF1-202ENST00000368020 RIOK2Q9BVS4 552 aaKnown RBP13.65□□□□□ -0.22
USF1-202ENST00000368020 UBE2ZQ9H832 354 aaPredicted RBP13.65□□□□□ -0.22
USF1-202ENST00000368020 SZT2Q5T011 3432 aa13.65□□□□□ -0.22
USF1-202ENST00000368020 KCNE1BA0A087WTH5 132 aa13.64□□□□□ -0.23
USF1-202ENST00000368020 PABPC4LP0CB38 370 aaKnown RBP13.64□□□□□ -0.23
USF1-202ENST00000368020 CDH1P12830 882 aa13.64□□□□□ -0.23
USF1-202ENST00000368020 LAMP2P13473 410 aa13.64□□□□□ -0.23
USF1-202ENST00000368020 JUPP14923 745 aa13.64□□□□□ -0.23
USF1-202ENST00000368020 ETV3P41162 512 aa13.64□□□□□ -0.23
USF1-202ENST00000368020 CCT8P50990 548 aa13.64□□□□□ -0.23
USF1-202ENST00000368020 PNLIPRP1P54315 467 aa13.64□□□□□ -0.23
USF1-202ENST00000368020 POLE2P56282 527 aa13.64□□□□□ -0.23
USF1-202ENST00000368020 RPS14P62263 151 aaKnown RBP13.64□□□□□ -0.23
USF1-202ENST00000368020 PLOD1Q02809 727 aaPredicted RBP13.64□□□□□ -0.23
USF1-202ENST00000368020 ATP6AP1Q15904 470 aa13.64□□□□□ -0.23
USF1-202ENST00000368020 CPSF6Q16630 551 aaKnown RBP eCLIP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms