RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 DFFBO76075 338 aa3.91□□□□□ -1.78
RNU4-28P-201ENST00000364739 TYMPP19971 482 aa3.91□□□□□ -1.78
RNU4-28P-201ENST00000364739 SP100P23497 879 aaPredicted RBP3.91□□□□□ -1.78
RNU4-28P-201ENST00000364739 MNDAP41218 407 aa3.91□□□□□ -1.78
RNU4-28P-201ENST00000364739 RPL21P46778 160 aaKnown RBP3.91□□□□□ -1.78
RNU4-28P-201ENST00000364739 ENPP2Q13822 863 aa3.91□□□□□ -1.78
RNU4-28P-201ENST00000364739 E2F5Q15329 346 aa3.91□□□□□ -1.78
RNU4-28P-201ENST00000364739 ELFN2Q5R3F8 820 aa3.91□□□□□ -1.78
RNU4-28P-201ENST00000364739 IL27RAQ6UWB1 636 aa3.91□□□□□ -1.78
RNU4-28P-201ENST00000364739 BTN2A1Q7KYR7 527 aa3.91□□□□□ -1.78
RNU4-28P-201ENST00000364739 ARHGAP22Q7Z5H3 698 aa3.91□□□□□ -1.78
RNU4-28P-201ENST00000364739 HOGA1Q86XE5 327 aa3.91□□□□□ -1.78
RNU4-28P-201ENST00000364739 MINDY1Q8N5J2 469 aa3.91□□□□□ -1.78
RNU4-28P-201ENST00000364739 SSMEM1Q8WWF3 244 aa3.91□□□□□ -1.78
RNU4-28P-201ENST00000364739 PRPF31Q8WWY3 499 aaKnown RBP3.91□□□□□ -1.78
RNU4-28P-201ENST00000364739 ARHGAP45Q92619 1136 aa3.91□□□□□ -1.78
RNU4-28P-201ENST00000364739 DYRK2Q92630 601 aa3.91□□□□□ -1.78
RNU4-28P-201ENST00000364739 ZNF622Q969S3 477 aaKnown RBP eCLIP3.91□□□□□ -1.78
RNU4-28P-201ENST00000364739 SPDL1Q96EA4 605 aa3.91□□□□□ -1.78
RNU4-28P-201ENST00000364739 RAD9AQ99638 391 aa3.91□□□□□ -1.78
RNU4-28P-201ENST00000364739 FUCA2Q9BTY2 467 aa3.91□□□□□ -1.78
RNU4-28P-201ENST00000364739 MCRIP2Q9BUT9 160 aaKnown RBP3.91□□□□□ -1.78
RNU4-28P-201ENST00000364739 FGF21Q9NSA1 209 aa3.91□□□□□ -1.78
RNU4-28P-201ENST00000364739 MRPL15Q9P015 296 aaKnown RBP3.91□□□□□ -1.78
RNU4-28P-201ENST00000364739 CRNNQ9UBG3 495 aaPredicted RBP3.91□□□□□ -1.78
RNU4-28P-201ENST00000364739 FBXO2Q9UK22 296 aaPredicted RBP3.91□□□□□ -1.78
RNU4-28P-201ENST00000364739 TNNQ9UQP3 1299 aa3.91□□□□□ -1.78
RNU4-28P-201ENST00000364739 WDR37Q9Y2I8 494 aa3.91□□□□□ -1.78
RNU4-28P-201ENST00000364739 TMED3Q9Y3Q3 217 aa3.91□□□□□ -1.78
RNU4-28P-201ENST00000364739 ENO4A6NNW6 628 aa3.9□□□□□ -1.79
RNU4-28P-201ENST00000364739 AHCYL1O43865 530 aa3.9□□□□□ -1.79
RNU4-28P-201ENST00000364739 PGM3O95394 542 aa3.9□□□□□ -1.79
RNU4-28P-201ENST00000364739 DARSP14868 501 aaKnown RBP3.9□□□□□ -1.79
RNU4-28P-201ENST00000364739 CDH3P22223 829 aa3.9□□□□□ -1.79
RNU4-28P-201ENST00000364739 MPZP25189 248 aa3.9□□□□□ -1.79
RNU4-28P-201ENST00000364739 CLNS1AP54105 237 aaKnown RBP3.9□□□□□ -1.79
RNU4-28P-201ENST00000364739 DRP2Q13474 957 aa3.9□□□□□ -1.79
RNU4-28P-201ENST00000364739 SNAPC1Q16533 368 aa3.9□□□□□ -1.79
RNU4-28P-201ENST00000364739 SGSM1Q2NKQ1 1148 aa3.9□□□□□ -1.79
RNU4-28P-201ENST00000364739 SYT14P1Q58G82 188 aa3.9□□□□□ -1.79
RNU4-28P-201ENST00000364739 C20orf194Q5TEA3 1177 aa3.9□□□□□ -1.79
RNU4-28P-201ENST00000364739 C6orf163Q5TEZ5 329 aa3.9□□□□□ -1.79
RNU4-28P-201ENST00000364739 TMEM207Q6UWW9 146 aa3.9□□□□□ -1.79
RNU4-28P-201ENST00000364739 Q6ZRP5 223 aa3.9□□□□□ -1.79
RNU4-28P-201ENST00000364739 CFAP61Q8NHU2 1237 aa3.9□□□□□ -1.79
RNU4-28P-201ENST00000364739 SYN2Q92777 582 aaPredicted RBP3.9□□□□□ -1.79
RNU4-28P-201ENST00000364739 SPACA9Q96E40 222 aaPredicted RBP3.9□□□□□ -1.79
RNU4-28P-201ENST00000364739 GCNAQ96QF7 691 aa3.9□□□□□ -1.79
RNU4-28P-201ENST00000364739 EGFL8Q99944 293 aa3.9□□□□□ -1.79
RNU4-28P-201ENST00000364739 CCDC3Q9BQI4 270 aa3.9□□□□□ -1.79
RNU4-28P-201ENST00000364739 KLHL4Q9C0H6 718 aa3.9□□□□□ -1.79
RNU4-28P-201ENST00000364739 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.9□□□□□ -1.79
RNU4-28P-201ENST00000364739 TMEM5Q9Y2B1 443 aa3.9□□□□□ -1.79
RNU4-28P-201ENST00000364739 ARID2Q68CP9 1835 aa3.89□□□□□ -1.79
RNU4-28P-201ENST00000364739 LOC100509620A0A075B734 347 aa3.89□□□□□ -1.79
RNU4-28P-201ENST00000364739 MAGEC1O60732 1142 aa3.89□□□□□ -1.79
RNU4-28P-201ENST00000364739 ZSCAN5DPP0CG00 497 aa3.89□□□□□ -1.79
RNU4-28P-201ENST00000364739 OPRL1P41146 370 aa3.89□□□□□ -1.79
RNU4-28P-201ENST00000364739 MAZP56270 477 aaKnown RBP3.89□□□□□ -1.79
RNU4-28P-201ENST00000364739 SLC1A5Q15758 541 aa3.89□□□□□ -1.79
RNU4-28P-201ENST00000364739 CA9Q16790 459 aa3.89□□□□□ -1.79
RNU4-28P-201ENST00000364739 C15orf59Q2T9L4 293 aaPredicted RBP3.89□□□□□ -1.79
RNU4-28P-201ENST00000364739 MZT2BQ6NZ67 158 aa3.89□□□□□ -1.79
RNU4-28P-201ENST00000364739 OR5AP2Q8NGF4 316 aa3.89□□□□□ -1.79
RNU4-28P-201ENST00000364739 OR52N5Q8NH56 324 aa3.89□□□□□ -1.79
RNU4-28P-201ENST00000364739 VANGL1Q8TAA9 524 aaPredicted RBP3.89□□□□□ -1.79
RNU4-28P-201ENST00000364739 CCDC107Q8WV48 283 aa3.89□□□□□ -1.79
RNU4-28P-201ENST00000364739 DHX58Q96C10 678 aa3.89□□□□□ -1.79
RNU4-28P-201ENST00000364739 SFXN2Q96NB2 322 aa3.89□□□□□ -1.79
RNU4-28P-201ENST00000364739 NECTIN4Q96NY8 510 aa3.89□□□□□ -1.79
RNU4-28P-201ENST00000364739 UBXN6Q9BZV1 441 aa3.89□□□□□ -1.79
RNU4-28P-201ENST00000364739 MAF1Q9H063 256 aa3.89□□□□□ -1.79
RNU4-28P-201ENST00000364739 WNT5BQ9H1J7 359 aa3.89□□□□□ -1.79
RNU4-28P-201ENST00000364739 MYNNQ9NPC7 610 aa3.89□□□□□ -1.79
RNU4-28P-201ENST00000364739 PANK4Q9NVE7 773 aa3.89□□□□□ -1.79
RNU4-28P-201ENST00000364739 DPP3Q9NY33 737 aa3.89□□□□□ -1.79
RNU4-28P-201ENST00000364739 HAO2Q9NYQ3 351 aa3.89□□□□□ -1.79
RNU4-28P-201ENST00000364739 GDE1Q9NZC3 331 aa3.89□□□□□ -1.79
RNU4-28P-201ENST00000364739 RPS6KA6Q9UK32 745 aa3.89□□□□□ -1.79
RNU4-28P-201ENST00000364739 RNF150Q9ULK6 438 aa3.89□□□□□ -1.79
RNU4-28P-201ENST00000364739 MAGED1Q9Y5V3 778 aaPredicted RBP3.89□□□□□ -1.79
RNU4-28P-201ENST00000364739 MYH14Q7Z406 1995 aaKnown RBP3.89□□□□□ -1.79
RNU4-28P-201ENST00000364739 DCXO43602 365 aa3.88□□□□□ -1.79
RNU4-28P-201ENST00000364739 PFKFB1P16118 471 aa3.88□□□□□ -1.79
RNU4-28P-201ENST00000364739 LEPRP48357 1165 aaKnown RBP3.88□□□□□ -1.79
RNU4-28P-201ENST00000364739 LBX1P52954 281 aa3.88□□□□□ -1.79
RNU4-28P-201ENST00000364739 HERV-K104P61576 105 aa3.88□□□□□ -1.79
RNU4-28P-201ENST00000364739 MAT1AQ00266 395 aaKnown RBP3.88□□□□□ -1.79
RNU4-28P-201ENST00000364739 NECTIN1Q15223 517 aa3.88□□□□□ -1.79
RNU4-28P-201ENST00000364739 MAPRE1Q15691 268 aaKnown RBP3.88□□□□□ -1.79
RNU4-28P-201ENST00000364739 ODF4Q2M2E3 257 aa3.88□□□□□ -1.79
RNU4-28P-201ENST00000364739 SNAI3Q3KNW1 292 aa3.88□□□□□ -1.79
RNU4-28P-201ENST00000364739 CBWD6Q4V339 395 aa3.88□□□□□ -1.79
RNU4-28P-201ENST00000364739 BMP2KLQ5H9B9 411 aa3.88□□□□□ -1.79
RNU4-28P-201ENST00000364739 CBWD3Q5JTY5 395 aa3.88□□□□□ -1.79
RNU4-28P-201ENST00000364739 ZNF613Q6PF04 617 aa3.88□□□□□ -1.79
RNU4-28P-201ENST00000364739 DOK6Q6PKX4 331 aa3.88□□□□□ -1.79
RNU4-28P-201ENST00000364739 NUP54Q7Z3B4 507 aa3.88□□□□□ -1.79
RNU4-28P-201ENST00000364739 MARVELD2Q8N4S9 558 aa3.88□□□□□ -1.79
RNU4-28P-201ENST00000364739 NIPA2Q8N8Q9 360 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms