RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 TDRKHQ9Y2W6 561 aaKnown RBP20.05■□□□□ 0.8
SHISA4-201ENST00000362011 COLEC10Q9Y6Z7 277 aa20.05■□□□□ 0.8
SHISA4-201ENST00000362011 KRT87PA6NCN2 255 aa20.04■□□□□ 0.8
SHISA4-201ENST00000362011 OR5K4A6NMS3 321 aa20.04■□□□□ 0.8
SHISA4-201ENST00000362011 PATE3B3GLJ2 98 aa20.04■□□□□ 0.8
SHISA4-201ENST00000362011 TMEM114B3SHH9 223 aa20.04■□□□□ 0.8
SHISA4-201ENST00000362011 TCP11X1B4DZS4 312 aa20.04■□□□□ 0.8
SHISA4-201ENST00000362011 TAPBPO15533 448 aa20.04■□□□□ 0.8
SHISA4-201ENST00000362011 NPHS1O60500 1241 aa20.04■□□□□ 0.8
SHISA4-201ENST00000362011 SUPT7LO94864 414 aa20.04■□□□□ 0.8
SHISA4-201ENST00000362011 SIX3O95343 332 aaPredicted RBP20.04■□□□□ 0.8
SHISA4-201ENST00000362011 NDUFS1P28331 727 aa20.04■□□□□ 0.8
SHISA4-201ENST00000362011 RXRGP48443 463 aa20.04■□□□□ 0.8
SHISA4-201ENST00000362011 HSPA7P48741 367 aa20.04■□□□□ 0.8
SHISA4-201ENST00000362011 AGTR2P50052 363 aa20.04■□□□□ 0.8
SHISA4-201ENST00000362011 GRIK2Q13002 908 aa20.04■□□□□ 0.8
SHISA4-201ENST00000362011 RCN2Q14257 317 aa20.04■□□□□ 0.8
SHISA4-201ENST00000362011 PCBP2Q15366 365 aaKnown RBP eCLIP20.04■□□□□ 0.8
SHISA4-201ENST00000362011 ZNF423Q2M1K9 1284 aa20.04■□□□□ 0.8
SHISA4-201ENST00000362011 UNC50Q53HI1 259 aa20.04■□□□□ 0.8
SHISA4-201ENST00000362011 ANKS6Q68DC2 871 aa20.04■□□□□ 0.8
SHISA4-201ENST00000362011 FAM46DQ8NEK8 389 aa20.04■□□□□ 0.8
SHISA4-201ENST00000362011 TMEM79Q9BSE2 394 aa20.04■□□□□ 0.8
SHISA4-201ENST00000362011 C1QTNF3Q9BXJ4 246 aa20.04■□□□□ 0.8
SHISA4-201ENST00000362011 STOX2Q9P2F5 926 aaPredicted RBP20.04■□□□□ 0.8
SHISA4-201ENST00000362011 SLC6A14Q9UN76 642 aa20.04■□□□□ 0.8
SHISA4-201ENST00000362011 KIR2DS5A0A0G2JLQ3 304 aa20.03■□□□□ 0.8
SHISA4-201ENST00000362011 A0A0G2JNG1 304 aa20.03■□□□□ 0.8
SHISA4-201ENST00000362011 LRRC14BA6NHZ5 514 aa20.03■□□□□ 0.8
SHISA4-201ENST00000362011 KIR2DS3K7RE56 304 aa20.03■□□□□ 0.8
SHISA4-201ENST00000362011 KDM1AO60341 852 aa20.03■□□□□ 0.8
SHISA4-201ENST00000362011 SNRNP200O75643 2136 aaKnown RBP20.03■□□□□ 0.8
SHISA4-201ENST00000362011 ANXA6P08133 673 aa20.03■□□□□ 0.8
SHISA4-201ENST00000362011 RPS17P08708 135 aaKnown RBP20.03■□□□□ 0.8
SHISA4-201ENST00000362011 GGT5P36269 586 aa20.03■□□□□ 0.8
SHISA4-201ENST00000362011 SERPINB5P36952 375 aa20.03■□□□□ 0.8
SHISA4-201ENST00000362011 SLC1A6P48664 564 aa20.03■□□□□ 0.8
SHISA4-201ENST00000362011 ARRB1P49407 418 aaPredicted RBP20.03■□□□□ 0.8
SHISA4-201ENST00000362011 ABCE1P61221 599 aaKnown RBP20.03■□□□□ 0.8
SHISA4-201ENST00000362011 PRKG2Q13237 762 aa20.03■□□□□ 0.8
SHISA4-201ENST00000362011 KIR2DS5Q14953 304 aa20.03■□□□□ 0.8
SHISA4-201ENST00000362011 C18orf21Q32NC0 220 aaPredicted RBP20.03■□□□□ 0.8
SHISA4-201ENST00000362011 FBXO48Q5FWF7 155 aa20.03■□□□□ 0.8
SHISA4-201ENST00000362011 CES4AQ5XG92 561 aa20.03■□□□□ 0.8
SHISA4-201ENST00000362011 METTL2BQ6P1Q9 378 aaKnown RBP20.03■□□□□ 0.8
SHISA4-201ENST00000362011 IYDQ6PHW0 289 aa20.03■□□□□ 0.8
SHISA4-201ENST00000362011 SLC23A3Q6PIS1 610 aa20.03■□□□□ 0.8
SHISA4-201ENST00000362011 TRIM48Q8IWZ4 208 aa20.03■□□□□ 0.8
SHISA4-201ENST00000362011 PPP4R1Q8TF05 950 aa20.03■□□□□ 0.8
SHISA4-201ENST00000362011 ZDHHC1Q8WTX9 485 aa20.03■□□□□ 0.8
SHISA4-201ENST00000362011 ESAMQ96AP7 390 aa20.03■□□□□ 0.8
SHISA4-201ENST00000362011 CNDP1Q96KN2 507 aa20.03■□□□□ 0.8
SHISA4-201ENST00000362011 CAMK1GQ96NX5 476 aa20.03■□□□□ 0.8
SHISA4-201ENST00000362011 CD244Q9BZW8 370 aa20.03■□□□□ 0.8
SHISA4-201ENST00000362011 CAPN10Q9HC96 672 aa20.03■□□□□ 0.8
SHISA4-201ENST00000362011 SPATA7Q9P0W8 599 aa20.03■□□□□ 0.8
SHISA4-201ENST00000362011 ZNF624Q9P2J8 865 aaPredicted RBP20.03■□□□□ 0.8
SHISA4-201ENST00000362011 CIDEBQ9UHD4 219 aa20.03■□□□□ 0.8
SHISA4-201ENST00000362011 RALYQ9UKM9 306 aaKnown RBP20.03■□□□□ 0.8
SHISA4-201ENST00000362011 ZMIZ1Q9ULJ6 1067 aa20.03■□□□□ 0.8
SHISA4-201ENST00000362011 ZZEF1O43149 2961 aa20.03■□□□□ 0.8
SHISA4-201ENST00000362011 B4DGG1 531 aa20.02■□□□□ 0.8
SHISA4-201ENST00000362011 LMO7DNF2Z398 122 aa20.02■□□□□ 0.8
SHISA4-201ENST00000362011 DFNA5O60443 496 aa20.02■□□□□ 0.8
SHISA4-201ENST00000362011 SHOX2O60902 331 aaPredicted RBP20.02■□□□□ 0.8
SHISA4-201ENST00000362011 SDC3O75056 442 aa20.02■□□□□ 0.8
SHISA4-201ENST00000362011 SLC16A8O95907 504 aa20.02■□□□□ 0.8
SHISA4-201ENST00000362011 VIMP08670 466 aaKnown RBP20.02■□□□□ 0.8
SHISA4-201ENST00000362011 IMPA1P29218 277 aa20.02■□□□□ 0.8
SHISA4-201ENST00000362011 SLC19A1P41440 591 aa20.02■□□□□ 0.8
SHISA4-201ENST00000362011 GRB7Q14451 532 aa20.02■□□□□ 0.8
SHISA4-201ENST00000362011 AGTRAPQ6RW13 159 aa20.02■□□□□ 0.8
SHISA4-201ENST00000362011 IL27RAQ6UWB1 636 aa20.02■□□□□ 0.8
SHISA4-201ENST00000362011 RAB42Q8N4Z0 105 aa20.02■□□□□ 0.8
SHISA4-201ENST00000362011 ZNF483Q8TF39 744 aaPredicted RBP20.02■□□□□ 0.8
SHISA4-201ENST00000362011 GATA6Q92908 595 aa20.02■□□□□ 0.8
SHISA4-201ENST00000362011 DRC3Q9H069 523 aa20.02■□□□□ 0.8
SHISA4-201ENST00000362011 GSTO2Q9H4Y5 243 aa20.02■□□□□ 0.8
SHISA4-201ENST00000362011 ACSS2Q9NR19 701 aa20.02■□□□□ 0.8
SHISA4-201ENST00000362011 THAP1Q9NVV9 213 aa20.02■□□□□ 0.8
SHISA4-201ENST00000362011 OPTCQ9UBM4 332 aa20.02■□□□□ 0.8
SHISA4-201ENST00000362011 LNPEPQ9UIQ6 1025 aa20.02■□□□□ 0.8
SHISA4-201ENST00000362011 PCTPQ9UKL6 214 aa20.02■□□□□ 0.8
SHISA4-201ENST00000362011 CSNK1G3Q9Y6M4 447 aa20.02■□□□□ 0.8
SHISA4-201ENST00000362011 SPEGQ15772 3267 aa20.02■□□□□ 0.8
SHISA4-201ENST00000362011 FAM208BQ5VWN6 2430 aa20.02■□□□□ 0.8
SHISA4-201ENST00000362011 TRBV23OR9-2A0A075B6M9 112 aa20.02■□□□□ 0.79
SHISA4-201ENST00000362011 A0A1B0GTQ1 180 aa20.02■□□□□ 0.79
SHISA4-201ENST00000362011 TMEM8BA6NDV4 472 aa20.02■□□□□ 0.79
SHISA4-201ENST00000362011 YY2O15391 372 aa20.02■□□□□ 0.79
SHISA4-201ENST00000362011 YKT6O15498 198 aa20.02■□□□□ 0.79
SHISA4-201ENST00000362011 ITM2AO43736 263 aa20.02■□□□□ 0.79
SHISA4-201ENST00000362011 CCNT2O60583 730 aaKnown RBP20.02■□□□□ 0.79
SHISA4-201ENST00000362011 SNNO75324 88 aaPredicted RBP20.02■□□□□ 0.79
SHISA4-201ENST00000362011 STK16O75716 305 aa20.02■□□□□ 0.79
SHISA4-201ENST00000362011 HSPA4LO95757 839 aa20.02■□□□□ 0.79
SHISA4-201ENST00000362011 XRCC1P18887 633 aaPredicted RBP20.02■□□□□ 0.79
SHISA4-201ENST00000362011 HSD17B2P37059 387 aa20.02■□□□□ 0.79
SHISA4-201ENST00000362011 CBX1P83916 185 aa20.02■□□□□ 0.79
SHISA4-201ENST00000362011 TRIM61Q5EBN2 209 aa20.02■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms